RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	VPS72	Q03388	795 aa		3.51	□□□□□ -1.85
APA1	YCL050C	BET5	Q03630	159 aa		3.51	□□□□□ -1.85
APA1	YCL050C	ADH2	P00331	348 aa	Known RBP	3.5	□□□□□ -1.85
APA1	YCL050C	SEC63	P14906	663 aa		3.5	□□□□□ -1.85
APA1	YCL050C	ISY1	P21374	235 aa	Predicted RBP	3.5	□□□□□ -1.85
APA1	YCL050C	LSB5	P25369	354 aa		3.5	□□□□□ -1.85
APA1	YCL050C	RHB1	P25378	209 aa		3.5	□□□□□ -1.85
APA1	YCL050C	CDC60	P26637	1090 aa	Known RBP	3.5	□□□□□ -1.85
APA1	YCL050C	BEM1	P29366	551 aa		3.5	□□□□□ -1.85
APA1	YCL050C	SIN4	P32259	974 aa		3.5	□□□□□ -1.85
APA1	YCL050C	MUD1	P32605	298 aa	Known RBP	3.5	□□□□□ -1.85
APA1	YCL050C	JNM1	P36224	373 aa		3.5	□□□□□ -1.85
APA1	YCL050C	PAN6	P40459	309 aa		3.5	□□□□□ -1.85
APA1	YCL050C	GPD2	P41911	440 aa	Known RBP	3.5	□□□□□ -1.85
APA1	YCL050C	CWC25	P53854	179 aa	Known RBP	3.5	□□□□□ -1.85
APA1	YCL050C	VAM3	Q12241	283 aa		3.5	□□□□□ -1.85
APA1	YCL050C	ORT1	Q12375	292 aa		3.5	□□□□□ -1.85
APA1	YCL050C	TRP1	P00912	224 aa		3.49	□□□□□ -1.85
APA1	YCL050C	FUR1	P18562	216 aa	Known RBP	3.49	□□□□□ -1.85
APA1	YCL050C	SNT1	P25357	1226 aa		3.49	□□□□□ -1.85
APA1	YCL050C	COS5	P47187	383 aa		3.49	□□□□□ -1.85
APA1	YCL050C	YGL039W	P53183	348 aa	Known RBP	3.49	□□□□□ -1.85
APA1	YCL050C	MHR1	Q06630	226 aa		3.49	□□□□□ -1.85
APA1	YCL050C	COS7	Q07788	383 aa		3.49	□□□□□ -1.85
APA1	YCL050C	YRF1-4	O13559	1382 aa		3.49	□□□□□ -1.85
APA1	YCL050C	CLN1	P20437	546 aa		3.48	□□□□□ -1.85
APA1	YCL050C	KRE2	P27809	442 aa		3.48	□□□□□ -1.85
APA1	YCL050C	YME2	P32843	850 aa		3.48	□□□□□ -1.85
APA1	YCL050C	RRT2	P38332	387 aa		3.48	□□□□□ -1.85
APA1	YCL050C	SRB7	P47822	140 aa		3.48	□□□□□ -1.85
APA1	YCL050C	RSN1	Q03516	953 aa		3.48	□□□□□ -1.85
APA1	YCL050C	YMR155W	Q03795	547 aa		3.48	□□□□□ -1.85
APA1	YCL050C	MSG5	P38590	489 aa		3.47	□□□□□ -1.85
APA1	YCL050C	RFC3	P38629	340 aa		3.47	□□□□□ -1.85
APA1	YCL050C	NOC2	P39744	710 aa	Known RBP	3.47	□□□□□ -1.85
APA1	YCL050C	SSU1	P41930	458 aa		3.47	□□□□□ -1.85
APA1	YCL050C	PHB2	P50085	310 aa		3.47	□□□□□ -1.85
APA1	YCL050C	RRG1	Q12167	365 aa	Predicted RBP	3.47	□□□□□ -1.85
APA1	YCL050C	RBD2	Q12270	262 aa		3.47	□□□□□ -1.85
APA1	YCL050C	SCM3	Q12334	223 aa		3.47	□□□□□ -1.85
APA1	YCL050C	PGA3	Q12746	312 aa	Known RBP	3.47	□□□□□ -1.85
APA1	YCL050C	RPS8A	P0CX39	200 aa	Known RBP	3.46	□□□□□ -1.86
APA1	YCL050C	RPS8B	P0CX40	200 aa	Known RBP	3.46	□□□□□ -1.86
APA1	YCL050C	HIR2	P32480	875 aa		3.46	□□□□□ -1.86
APA1	YCL050C	NPL6	P32832	435 aa		3.46	□□□□□ -1.86
APA1	YCL050C	MMS4	P38257	691 aa		3.46	□□□□□ -1.86
APA1	YCL050C	YBR137W	P38276	179 aa		3.46	□□□□□ -1.86
APA1	YCL050C	DED81	P38707	554 aa	Known RBP	3.46	□□□□□ -1.86
APA1	YCL050C	PCF11	P39081	626 aa	Predicted RBP	3.46	□□□□□ -1.86
APA1	YCL050C	AZR1	P50080	613 aa		3.46	□□□□□ -1.86
APA1	YCL050C	SHY1	P53266	389 aa		3.46	□□□□□ -1.86
APA1	YCL050C	MTM1	P53320	366 aa		3.46	□□□□□ -1.86
APA1	YCL050C	ARX1	Q03862	593 aa	Known RBP	3.46	□□□□□ -1.86
APA1	YCL050C	YMR027W	Q04371	470 aa		3.46	□□□□□ -1.86
APA1	YCL050C	MDM30	Q05930	598 aa		3.46	□□□□□ -1.86
APA1	YCL050C	SKI7	Q08491	747 aa	Predicted RBP	3.46	□□□□□ -1.86
APA1	YCL050C	WTM1	Q12363	437 aa	Known RBP	3.46	□□□□□ -1.86
APA1	YCL050C	ILV5	P06168	395 aa	Known RBP	3.45	□□□□□ -1.86
APA1	YCL050C	NFT1	P0CE68	1218 aa		3.45	□□□□□ -1.86
APA1	YCL050C	CTR86	P25355	563 aa		3.45	□□□□□ -1.86
APA1	YCL050C	POP5	P28005	173 aa		3.45	□□□□□ -1.86
APA1	YCL050C	NFU1	P32860	256 aa		3.45	□□□□□ -1.86
APA1	YCL050C	SOR1	P35497	357 aa	Known RBP	3.45	□□□□□ -1.86
APA1	YCL050C	TIS11	P47977	285 aa		3.45	□□□□□ -1.86
APA1	YCL050C	YLR152C	P54072	576 aa		3.45	□□□□□ -1.86
APA1	YCL050C	SKO1	Q02100	647 aa		3.45	□□□□□ -1.86
APA1	YCL050C	KAP120	Q02932	1032 aa		3.45	□□□□□ -1.86
APA1	YCL050C	SOR2	Q07786	357 aa		3.45	□□□□□ -1.86
APA1	YCL050C	YRM1	Q12340	786 aa		3.45	□□□□□ -1.86
APA1	YCL050C	RMD5	Q12508	421 aa		3.45	□□□□□ -1.86
APA1	YCL050C	SCEI	P03882	235 aa		3.44	□□□□□ -1.86
APA1	YCL050C	YCR051W	P25631	222 aa		3.44	□□□□□ -1.86
APA1	YCL050C	SMY1	P32364	656 aa	Known RBP	3.44	□□□□□ -1.86
APA1	YCL050C	BYE1	P36106	594 aa		3.44	□□□□□ -1.86
APA1	YCL050C	MRPL10	P36520	322 aa		3.44	□□□□□ -1.86
APA1	YCL050C	APE3	P37302	537 aa	Known RBP	3.44	□□□□□ -1.86
APA1	YCL050C	GPI15	P53961	229 aa		3.44	□□□□□ -1.86
APA1	YCL050C	GIP3	Q03016	1276 aa		3.44	□□□□□ -1.86
APA1	YCL050C	DON1	Q05610	365 aa		3.44	□□□□□ -1.86
APA1	YCL050C	DIS3	Q08162	1001 aa	Known RBP	3.44	□□□□□ -1.86
APA1	YCL050C	RKM1	Q08961	583 aa	Predicted RBP	3.44	□□□□□ -1.86
APA1	YCL050C	SPR1	P32603	445 aa		3.43	□□□□□ -1.86
APA1	YCL050C	RHO5	P53879	331 aa	Known RBP	3.43	□□□□□ -1.86
APA1	YCL050C	OAZ1	Q02803	292 aa		3.43	□□□□□ -1.86
APA1	YCL050C	TAF12	Q03761	539 aa		3.43	□□□□□ -1.86
APA1	YCL050C	ROY1	Q04847	553 aa		3.43	□□□□□ -1.86
APA1	YCL050C	IRC25	Q07951	179 aa		3.43	□□□□□ -1.86
APA1	YCL050C	AFI1	Q99222	893 aa		3.43	□□□□□ -1.86
APA1	YCL050C	CYC3	P06182	269 aa		3.42	□□□□□ -1.86
APA1	YCL050C	HOM3	P10869	527 aa		3.42	□□□□□ -1.86
APA1	YCL050C	NAM2	P11325	894 aa		3.42	□□□□□ -1.86
APA1	YCL050C	SPO12	P17123	173 aa		3.42	□□□□□ -1.86
APA1	YCL050C	URA4	P20051	364 aa		3.42	□□□□□ -1.86
APA1	YCL050C	HXT1	P32465	570 aa		3.42	□□□□□ -1.86
APA1	YCL050C	RRN10	P38204	145 aa		3.42	□□□□□ -1.86
APA1	YCL050C	PHO86	P46956	311 aa		3.42	□□□□□ -1.86
APA1	YCL050C	YMR130W	Q04223	302 aa		3.42	□□□□□ -1.86
APA1	YCL050C	BCH1	Q05029	724 aa		3.42	□□□□□ -1.86
APA1	YCL050C	BRF1	P29056	596 aa		3.41	□□□□□ -1.86
APA1	YCL050C	TFB1	P32776	642 aa		3.41	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms