RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 PIR3Q03180 325 aa7.73□□□□□ -1.17
NME1NME1 RPN9Q04062 393 aaKnown RBP7.73□□□□□ -1.17
NME1NME1 COX3P00420 269 aa7.72□□□□□ -1.17
NME1NME1 YML002WP0CF17 737 aa7.72□□□□□ -1.17
NME1NME1 PCA1P38360 1216 aa7.72□□□□□ -1.17
NME1NME1 YFR016CP43597 1233 aaKnown RBP7.72□□□□□ -1.17
NME1NME1 FRE4P53746 719 aa7.72□□□□□ -1.17
NME1NME1 EOS1P53938 366 aa7.72□□□□□ -1.17
NME1NME1 MRP51Q02950 344 aa7.72□□□□□ -1.17
NME1NME1 ARG4P04076 463 aaPredicted RBP7.71□□□□□ -1.18
NME1NME1 CTR86P25355 563 aa7.71□□□□□ -1.18
NME1NME1 PUT3P25502 979 aaPredicted RBP7.71□□□□□ -1.18
NME1NME1 NIP1P32497 812 aaKnown RBP7.71□□□□□ -1.18
NME1NME1 MDM31P38880 579 aa7.71□□□□□ -1.18
NME1NME1 PCF11P39081 626 aaPredicted RBP7.71□□□□□ -1.18
NME1NME1 YAL037WP39728 267 aa7.71□□□□□ -1.18
NME1NME1 PRP42Q03776 544 aaKnown RBP7.71□□□□□ -1.18
NME1NME1 YPR022CQ12139 1133 aa7.71□□□□□ -1.18
NME1NME1 RUP1Q12242 671 aa7.71□□□□□ -1.18
NME1NME1 ATS1P31386 333 aa7.7□□□□□ -1.18
NME1NME1 GAT2P40209 560 aa7.7□□□□□ -1.18
NME1NME1 PIB2P53191 635 aa7.7□□□□□ -1.18
NME1NME1 CAF40P53829 373 aa7.7□□□□□ -1.18
NME1NME1 GPI15P53961 229 aa7.7□□□□□ -1.18
NME1NME1 YPL199CQ08954 240 aa7.7□□□□□ -1.18
NME1NME1 ORT1Q12375 292 aa7.7□□□□□ -1.18
NME1NME1 RAD57P25301 460 aa7.69□□□□□ -1.18
NME1NME1 LSB5P25369 354 aa7.69□□□□□ -1.18
NME1NME1 TIP1P27654 210 aaPredicted RBP7.69□□□□□ -1.18
NME1NME1 HSP104P31539 908 aaKnown RBP7.69□□□□□ -1.18
NME1NME1 PRO3P32263 286 aaKnown RBP7.69□□□□□ -1.18
NME1NME1 DHH1P39517 506 aaKnown RBP7.69□□□□□ -1.18
NME1NME1 RRT5P43607 289 aa7.69□□□□□ -1.18
NME1NME1 YNR048WP53740 393 aa7.69□□□□□ -1.18
NME1NME1 PPM1Q04081 328 aa7.69□□□□□ -1.18
NME1NME1 YDR341CQ05506 607 aaKnown RBP7.69□□□□□ -1.18
NME1NME1 SKI7Q08491 747 aaPredicted RBP7.69□□□□□ -1.18
NME1NME1 TIM18Q08749 192 aa7.69□□□□□ -1.18
NME1NME1 PKH2Q12236 1081 aaKnown RBP7.69□□□□□ -1.18
NME1NME1 FRE6Q12473 712 aa7.69□□□□□ -1.18
NME1NME1 SKS1Q12505 502 aa7.69□□□□□ -1.18
NME1NME1 ILV5P06168 395 aaKnown RBP7.68□□□□□ -1.18
NME1NME1 RSN1Q03516 953 aa7.68□□□□□ -1.18
NME1NME1 BET5Q03630 159 aa7.68□□□□□ -1.18
NME1NME1 TIP41Q12199 356 aa7.68□□□□□ -1.18
NME1NME1 SAM1P10659 382 aaKnown RBP7.67□□□□□ -1.18
NME1NME1 ALG1P16661 449 aa7.67□□□□□ -1.18
NME1NME1 SAM2P19358 384 aaKnown RBP7.67□□□□□ -1.18
NME1NME1 WSS1P38838 269 aa7.67□□□□□ -1.18
NME1NME1 MLC1P53141 149 aa7.67□□□□□ -1.18
NME1NME1 ATG34Q12292 412 aa7.67□□□□□ -1.18
NME1NME1 TEF1P02994 458 aaKnown RBP7.66□□□□□ -1.18
NME1NME1 HEM2P05373 342 aa7.66□□□□□ -1.18
NME1NME1 RPL6BP05739 176 aaKnown RBP7.66□□□□□ -1.18
NME1NME1 STN1P38960 494 aa7.66□□□□□ -1.18
NME1NME1 YJL213WP40896 331 aa7.66□□□□□ -1.18
NME1NME1 LAM5P43560 674 aa7.66□□□□□ -1.18
NME1NME1 COS10P52924 374 aa7.66□□□□□ -1.18
NME1NME1 RPL6AQ02326 176 aaKnown RBP7.66□□□□□ -1.18
NME1NME1 YPL107WQ02873 248 aa7.66□□□□□ -1.18
NME1NME1 SMF3Q12078 473 aaPredicted RBP7.66□□□□□ -1.18
NME1NME1 CYS4P32582 507 aaKnown RBP7.65□□□□□ -1.18
NME1NME1 PFF1P38244 976 aa7.65□□□□□ -1.18
NME1NME1 GDT1P38301 280 aaPredicted RBP7.65□□□□□ -1.18
NME1NME1 CAJ1P39101 391 aa7.65□□□□□ -1.18
NME1NME1 MST28P39552 234 aa7.65□□□□□ -1.18
NME1NME1 YPS6P40583 537 aa7.65□□□□□ -1.18
NME1NME1 SNM1P40993 198 aa7.65□□□□□ -1.18
NME1NME1 BRO1P48582 844 aa7.65□□□□□ -1.18
NME1NME1 PHB2P50085 310 aa7.65□□□□□ -1.18
NME1NME1 URH1Q04179 340 aa7.65□□□□□ -1.18
NME1NME1 YMR317WQ04893 1140 aa7.65□□□□□ -1.18
NME1NME1 RMD5Q12508 421 aa7.65□□□□□ -1.18
NME1NME1 MCK1P21965 375 aaKnown RBP7.64□□□□□ -1.19
NME1NME1 PHO91P27514 894 aa7.64□□□□□ -1.19
NME1NME1 MSP1P28737 362 aa7.64□□□□□ -1.19
NME1NME1 LOS1P33418 1100 aaPredicted RBP7.64□□□□□ -1.19
NME1NME1 RRP1P35178 278 aaPredicted RBP7.64□□□□□ -1.19
NME1NME1 YAT2P40017 923 aa7.64□□□□□ -1.19
NME1NME1 YGR016WP53209 190 aa7.64□□□□□ -1.19
NME1NME1 YDR541CQ03049 344 aa7.64□□□□□ -1.19
NME1NME1 NDL1Q06568 189 aa7.64□□□□□ -1.19
NME1NME1 CDC21P06785 304 aa7.63□□□□□ -1.19
NME1NME1 MLH1P38920 769 aa7.63□□□□□ -1.19
NME1NME1 YDL186WP48568 277 aa7.63□□□□□ -1.19
NME1NME1 NDD1Q08887 554 aa7.63□□□□□ -1.19
NME1NME1 PPT2Q12036 173 aa7.63□□□□□ -1.19
NME1NME1 YDR061WQ12298 539 aa7.63□□□□□ -1.19
NME1NME1 PRP16P15938 1071 aaPredicted RBP7.62□□□□□ -1.19
NME1NME1 DAD2P36162 133 aa7.62□□□□□ -1.19
NME1NME1 YBR056WP38081 501 aa7.62□□□□□ -1.19
NME1NME1 EPL1P43572 832 aa7.62□□□□□ -1.19
NME1NME1 ROG1P53118 685 aa7.62□□□□□ -1.19
NME1NME1 NSE1Q07913 336 aa7.62□□□□□ -1.19
NME1NME1 NFI1Q12216 726 aa7.62□□□□□ -1.19
NME1NME1 GDH1P07262 454 aaKnown RBP7.61□□□□□ -1.19
NME1NME1 IMA3P0CW40 589 aa7.61□□□□□ -1.19
NME1NME1 IMA4P0CW41 589 aa7.61□□□□□ -1.19
NME1NME1 CPR1P14832 162 aaKnown RBP7.61□□□□□ -1.19
NME1NME1 RNA14P25298 677 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms