RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Psmd14O35593 310 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 SarsP26638 512 aaKnown RBP11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Klhdc9Q3USL1 350 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ppp1r1bQ60829 194 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rexo1Q7TT28 1213 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Armcx3Q8BHS6 379 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Parp10Q8CIE4 960 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dph6Q9CQ28 267 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Acot3Q9QYR7 432 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Nlrp5Q9R1M5 1163 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 GsdmeQ9Z2D3 512 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Phrf1A6H619 1682 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Lrrfip1Q3UZ39 729 aaKnown RBP11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ccdc42Q5SV66 316 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Naa35Q6PHQ8 725 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Cracr2bQ80ZJ8 394 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Trmt2aQ8BNV1 574 aaKnown RBP11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Traf3ip3Q8C0G2 513 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 SltmQ8CH25 1031 aaKnown RBP11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Lzts2Q91YU6 671 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rhobtb3Q9CTN4 611 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Syce1Q9D495 329 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rwdd2aQ9D9S3 292 aa11.74□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ccdc24E9PUW8 296 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Guca2bO09051 106 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rb1P13405 921 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Hmgb1P63158 215 aaKnown RBP11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Bend4P86174 541 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Cdr2P97817 455 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Gas1Q01721 343 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Hoxa13Q62424 386 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 IgflQ6B9Z0 140 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Pip5kl1Q6U7H8 395 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Actn1Q7TPR4 892 aaKnown RBP11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Sdccag8Q80UF4 717 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Znf428Q8C1M2 176 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Chd5A2A8L1 1946 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 DgkiD3YWQ0 1071 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Pip4k2aO70172 405 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Psmc6P62334 389 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Cct5P80316 541 aaKnown RBP11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rnf40Q3U319 1001 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Igf2bp2Q5SF07 592 aaKnown RBP11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Stxbp3Q60770 592 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 HrQ61645 1182 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Camsap3Q80VC9 1252 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 D130040H23RikQ8BII3 405 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ift74Q8BKE9 600 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Znrd1-asQ8R0E5 213 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 HyiQ8R1F5 277 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Xrcc4Q924T3 326 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Fsip1Q9D3V5 435 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 ErmapQ9JLN5 566 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 BcamQ9R069 622 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Slc12a7Q9WVL3 1083 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 C2cd2E9Q3C1 696 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 PurbO35295 324 aaKnown RBP11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Snx12O70493 165 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 AgtP11859 477 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Atp6v0a2P15920 856 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Gna15P30678 374 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Lig1P37913 916 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 PtgdrP70263 357 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tcerg1lQ3B807 590 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Fam198bQ3UPI1 517 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tsr1Q5SWD9 803 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Mapk6Q61532 720 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Pacsin1Q61644 441 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ncapg2Q6DFV1 1138 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Mindy1Q76LS9 468 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Spats2Q8K1N4 545 aaKnown RBP11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Plagl1Q9JLQ4 704 aa11.73□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 1700016G14RikA0A286YCZ6 238 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tex11Q14AT2 947 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 NfrkbQ6PIJ4 1296 aaKnown RBP11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ttll1Q91V51 423 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Gps2Q921N8 327 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rnf34Q99KR6 376 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Add1Q9QYC0 735 aaKnown RBP11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Orc1Q9Z1N2 840 aaKnown RBP11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Mtmr2Q9Z2D1 643 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Psma7Q9Z2U0 248 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 TicrrQ8BQ33 1889 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Nrg3O35181 713 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Gad1P48318 593 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Kcnma1Q08460 1209 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 ItgadQ3V0T4 1168 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tbc1d9bQ5SVR0 1263 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Rnf187Q8BFX1 236 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Ifih1Q8R5F7 1025 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Haus2Q9CQS9 234 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 RnmtQ9D0L8 465 aaKnown RBP11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Trim42Q9D2H5 723 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Gm5114W4VSN8 858 aa11.72□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dnajb6O54946 365 aa11.71□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Cd44P15379 778 aa11.71□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Wdhd1P59328 1117 aa11.71□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Dcaf17Q3TUL7 519 aa11.71□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Trpc6Q61143 930 aa11.71□□□□□ -0.53
Ptcd1-201ENSMUST00000031628 Tsg101Q61187 391 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms