Protein–RNA interactions for Protein: P97817

Cdr2, Cerebellar degeneration-related protein 2, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr2P97817 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Cdr2P97817 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
Cdr2P97817 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Cdr2P97817 Gm25239-201ENSMUST00000174915 86 ntBASIC35.28■■■■□ 3.24
Cdr2P97817 Psd-208ENSMUST00000224556 2034 ntBASIC34.85■■■■□ 3.17
Cdr2P97817 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Cdr2P97817 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Cdr2P97817 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Cdr2P97817 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Cdr2P97817 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cdr2P97817 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Cdr2P97817 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Cdr2P97817 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Cdr2P97817 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.85
Cdr2P97817 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Cdr2P97817 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Cdr2P97817 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Cdr2P97817 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Cdr2P97817 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
Cdr2P97817 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.37■■■□□ 2.77
Cdr2P97817 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Cdr2P97817 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Cdr2P97817 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Cdr2P97817 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cdr2P97817 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cdr2P97817 Gm15042-201ENSMUST00000120212 883 ntBASIC31.74■■■□□ 2.67
Cdr2P97817 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.67■■■□□ 2.66
Cdr2P97817 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cdr2P97817 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.41■■■□□ 2.62
Cdr2P97817 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cdr2P97817 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Cdr2P97817 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.31■■■□□ 2.6
Cdr2P97817 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.3■■■□□ 2.6
Cdr2P97817 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.3■■■□□ 2.6
Cdr2P97817 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cdr2P97817 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cdr2P97817 Gm15045-201ENSMUST00000117359 883 ntBASIC31.27■■■□□ 2.6
Cdr2P97817 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Cdr2P97817 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.26■■■□□ 2.59
Cdr2P97817 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Cdr2P97817 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Cdr2P97817 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cdr2P97817 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cdr2P97817 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cdr2P97817 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cdr2P97817 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cdr2P97817 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
Cdr2P97817 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Cdr2P97817 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.79■■■□□ 2.52
Cdr2P97817 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Cdr2P97817 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Cdr2P97817 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cdr2P97817 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cdr2P97817 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cdr2P97817 Gm24109-201ENSMUST00000175489 103 ntBASIC30.42■■■□□ 2.46
Cdr2P97817 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cdr2P97817 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cdr2P97817 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Cdr2P97817 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cdr2P97817 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
Cdr2P97817 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cdr2P97817 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cdr2P97817 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cdr2P97817 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cdr2P97817 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.12■■■□□ 2.41
Cdr2P97817 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Cdr2P97817 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Cdr2P97817 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cdr2P97817 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cdr2P97817 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Cdr2P97817 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Cdr2P97817 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Cdr2P97817 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Cdr2P97817 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.78■■■□□ 2.36
Cdr2P97817 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cdr2P97817 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Cdr2P97817 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Cdr2P97817 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Cdr2P97817 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
Cdr2P97817 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Cdr2P97817 Gm23366-201ENSMUST00000175022 89 ntBASIC29.52■■■□□ 2.32
Cdr2P97817 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Cdr2P97817 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cdr2P97817 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cdr2P97817 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Cdr2P97817 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Cdr2P97817 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Cdr2P97817 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Cdr2P97817 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Cdr2P97817 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Cdr2P97817 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Cdr2P97817 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cdr2P97817 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Cdr2P97817 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Cdr2P97817 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.27■■■□□ 2.28
Cdr2P97817 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cdr2P97817 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
Cdr2P97817 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cdr2P97817 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cdr2P97817 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms