Protein–RNA interactions for Protein: Q8BNV1

Trmt2a, tRNA (uracil-5-)-methyltransferase homolog A, mousemouse

Known RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt2aQ8BNV1 Gm25239-201ENSMUST00000174915 86 ntBASIC45.63■■■■■ 4.9
Trmt2aQ8BNV1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.21■■■■■ 4.35
Trmt2aQ8BNV1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.58■■■■■ 4.25
Trmt2aQ8BNV1 Gm15042-201ENSMUST00000120212 883 ntBASIC39.84■■■■□ 3.97
Trmt2aQ8BNV1 Gm24109-201ENSMUST00000175489 103 ntBASIC39.58■■■■□ 3.93
Trmt2aQ8BNV1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Trmt2aQ8BNV1 Gm15045-201ENSMUST00000117359 883 ntBASIC39.01■■■■□ 3.84
Trmt2aQ8BNV1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
Trmt2aQ8BNV1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.53■■■■□ 3.76
Trmt2aQ8BNV1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Trmt2aQ8BNV1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
Trmt2aQ8BNV1 Gm23366-201ENSMUST00000175022 89 ntBASIC38.08■■■■□ 3.69
Trmt2aQ8BNV1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Trmt2aQ8BNV1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.85■■■■□ 3.65
Trmt2aQ8BNV1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Trmt2aQ8BNV1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Trmt2aQ8BNV1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.88■■■■□ 3.49
Trmt2aQ8BNV1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.86■■■■□ 3.49
Trmt2aQ8BNV1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.81■■■■□ 3.48
Trmt2aQ8BNV1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
Trmt2aQ8BNV1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.65■■■■□ 3.46
Trmt2aQ8BNV1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Trmt2aQ8BNV1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.44■■■■□ 3.42
Trmt2aQ8BNV1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.35■■■■□ 3.41
Trmt2aQ8BNV1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Trmt2aQ8BNV1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Trmt2aQ8BNV1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.29■■■■□ 3.4
Trmt2aQ8BNV1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Trmt2aQ8BNV1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Trmt2aQ8BNV1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Trmt2aQ8BNV1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.11■■■■□ 3.37
Trmt2aQ8BNV1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
Trmt2aQ8BNV1 Gm25238-201ENSMUST00000174914 89 ntBASIC36.05■■■■□ 3.36
Trmt2aQ8BNV1 Psd-208ENSMUST00000224556 2034 ntBASIC35.96■■■■□ 3.35
Trmt2aQ8BNV1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.96■■■■□ 3.35
Trmt2aQ8BNV1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Trmt2aQ8BNV1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
Trmt2aQ8BNV1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.41■■■■□ 3.26
Trmt2aQ8BNV1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.31■■■■□ 3.24
Trmt2aQ8BNV1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Trmt2aQ8BNV1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.13■■■■□ 3.21
Trmt2aQ8BNV1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
Trmt2aQ8BNV1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Trmt2aQ8BNV1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Trmt2aQ8BNV1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Trmt2aQ8BNV1 Gm27325-201ENSMUST00000175467 74 ntBASIC34.95■■■■□ 3.19
Trmt2aQ8BNV1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Trmt2aQ8BNV1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.9■■■■□ 3.18
Trmt2aQ8BNV1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.87■■■■□ 3.17
Trmt2aQ8BNV1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.74■■■■□ 3.15
Trmt2aQ8BNV1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.69■■■■□ 3.14
Trmt2aQ8BNV1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Trmt2aQ8BNV1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
Trmt2aQ8BNV1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.52■■■■□ 3.12
Trmt2aQ8BNV1 Gm25262-201ENSMUST00000174934 133 ntBASIC34.47■■■■□ 3.11
Trmt2aQ8BNV1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.42■■■■□ 3.1
Trmt2aQ8BNV1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Trmt2aQ8BNV1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Trmt2aQ8BNV1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Trmt2aQ8BNV1 Rab21-202ENSMUST00000218831 843 ntBASIC34.29■■■■□ 3.08
Trmt2aQ8BNV1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.18■■■■□ 3.06
Trmt2aQ8BNV1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
Trmt2aQ8BNV1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.13■■■■□ 3.05
Trmt2aQ8BNV1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Trmt2aQ8BNV1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Trmt2aQ8BNV1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Trmt2aQ8BNV1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34■■■■□ 3.03
Trmt2aQ8BNV1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.96■■■■□ 3.03
Trmt2aQ8BNV1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.95■■■■□ 3.03
Trmt2aQ8BNV1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.95■■■■□ 3.02
Trmt2aQ8BNV1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Trmt2aQ8BNV1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.88■■■■□ 3.01
Trmt2aQ8BNV1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.87■■■■□ 3.01
Trmt2aQ8BNV1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.85■■■■□ 3.01
Trmt2aQ8BNV1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Trmt2aQ8BNV1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Trmt2aQ8BNV1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Trmt2aQ8BNV1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.8■■■■□ 3
Trmt2aQ8BNV1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Trmt2aQ8BNV1 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.71■■■□□ 2.99
Trmt2aQ8BNV1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Trmt2aQ8BNV1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
Trmt2aQ8BNV1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
Trmt2aQ8BNV1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Trmt2aQ8BNV1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Trmt2aQ8BNV1 Gm26115-201ENSMUST00000175605 87 ntBASIC33.62■■■□□ 2.97
Trmt2aQ8BNV1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Trmt2aQ8BNV1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Trmt2aQ8BNV1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Trmt2aQ8BNV1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.53■■■□□ 2.96
Trmt2aQ8BNV1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Trmt2aQ8BNV1 Gm8109-201ENSMUST00000194076 746 ntBASIC33.45■■■□□ 2.95
Trmt2aQ8BNV1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.44■■■□□ 2.94
Trmt2aQ8BNV1 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.44■■■□□ 2.94
Trmt2aQ8BNV1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Trmt2aQ8BNV1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.4■■■□□ 2.94
Trmt2aQ8BNV1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Trmt2aQ8BNV1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Trmt2aQ8BNV1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.26■■■□□ 2.91
Trmt2aQ8BNV1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.25■■■□□ 2.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms