Protein–RNA interactions for Protein: P62334

Psmc6, 26S proteasome regulatory subunit 10B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc6P62334 Gm25239-201ENSMUST00000174915 86 ntBASIC43.36■■■■■ 4.53
Psmc6P62334 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
Psmc6P62334 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
Psmc6P62334 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Psmc6P62334 Gm24109-201ENSMUST00000175489 103 ntBASIC37.69■■■■□ 3.62
Psmc6P62334 Gm15042-201ENSMUST00000120212 883 ntBASIC37.61■■■■□ 3.61
Psmc6P62334 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Psmc6P62334 Gm15045-201ENSMUST00000117359 883 ntBASIC36.75■■■■□ 3.47
Psmc6P62334 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.59■■■■□ 3.45
Psmc6P62334 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Psmc6P62334 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.55■■■■□ 3.44
Psmc6P62334 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
Psmc6P62334 Gm23366-201ENSMUST00000175022 89 ntBASIC36.13■■■■□ 3.37
Psmc6P62334 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Psmc6P62334 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Psmc6P62334 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.29■■■■□ 3.24
Psmc6P62334 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Psmc6P62334 Psd-208ENSMUST00000224556 2034 ntBASIC35.06■■■■□ 3.2
Psmc6P62334 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35■■■■□ 3.19
Psmc6P62334 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.9■■■■□ 3.18
Psmc6P62334 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.88■■■■□ 3.17
Psmc6P62334 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Psmc6P62334 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
Psmc6P62334 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Psmc6P62334 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Psmc6P62334 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Psmc6P62334 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Psmc6P62334 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
Psmc6P62334 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Psmc6P62334 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Psmc6P62334 Gm25238-201ENSMUST00000174914 89 ntBASIC34.32■■■■□ 3.08
Psmc6P62334 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
Psmc6P62334 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.27■■■■□ 3.08
Psmc6P62334 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.16■■■■□ 3.06
Psmc6P62334 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.08■■■■□ 3.05
Psmc6P62334 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.01■■■■□ 3.04
Psmc6P62334 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Psmc6P62334 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
Psmc6P62334 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Psmc6P62334 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Psmc6P62334 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
Psmc6P62334 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.53■■■□□ 2.96
Psmc6P62334 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Psmc6P62334 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Psmc6P62334 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.27■■■□□ 2.92
Psmc6P62334 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Psmc6P62334 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Psmc6P62334 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
Psmc6P62334 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.1■■■□□ 2.89
Psmc6P62334 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Psmc6P62334 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
Psmc6P62334 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Psmc6P62334 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Psmc6P62334 Gm25262-201ENSMUST00000174934 133 ntBASIC32.96■■■□□ 2.87
Psmc6P62334 Gm27325-201ENSMUST00000175467 74 ntBASIC32.9■■■□□ 2.86
Psmc6P62334 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.89■■■□□ 2.86
Psmc6P62334 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.86■■■□□ 2.85
Psmc6P62334 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Psmc6P62334 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Psmc6P62334 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.71■■■□□ 2.83
Psmc6P62334 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Psmc6P62334 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Psmc6P62334 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Psmc6P62334 Rab21-202ENSMUST00000218831 843 ntBASIC32.47■■■□□ 2.79
Psmc6P62334 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.4■■■□□ 2.78
Psmc6P62334 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.4■■■□□ 2.78
Psmc6P62334 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Psmc6P62334 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.39■■■□□ 2.78
Psmc6P62334 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Psmc6P62334 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Psmc6P62334 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.34■■■□□ 2.77
Psmc6P62334 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Psmc6P62334 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.27■■■□□ 2.76
Psmc6P62334 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Psmc6P62334 Gm26115-201ENSMUST00000175605 87 ntBASIC32.24■■■□□ 2.75
Psmc6P62334 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Psmc6P62334 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Psmc6P62334 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.11■■■□□ 2.73
Psmc6P62334 Gm8109-201ENSMUST00000194076 746 ntBASIC32.09■■■□□ 2.73
Psmc6P62334 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Psmc6P62334 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Psmc6P62334 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Psmc6P62334 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.06■■■□□ 2.72
Psmc6P62334 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Psmc6P62334 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.05■■■□□ 2.72
Psmc6P62334 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Psmc6P62334 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Psmc6P62334 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Psmc6P62334 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
Psmc6P62334 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Psmc6P62334 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.87■■■□□ 2.69
Psmc6P62334 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Psmc6P62334 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Psmc6P62334 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.84■■■□□ 2.69
Psmc6P62334 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.83■■■□□ 2.69
Psmc6P62334 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Psmc6P62334 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Psmc6P62334 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Psmc6P62334 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Psmc6P62334 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.74■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms