RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W CBP4P37267 147 aa2.52□□□□□ -2.01
PEP12YOR036W MMS4P38257 691 aa2.52□□□□□ -2.01
PEP12YOR036W OSH3P38713 996 aaKnown RBP2.52□□□□□ -2.01
PEP12YOR036W FAA2P39518 744 aa2.52□□□□□ -2.01
PEP12YOR036W VHS2P40463 436 aa2.52□□□□□ -2.01
PEP12YOR036W POP1P41812 875 aa2.52□□□□□ -2.01
PEP12YOR036W RPS0BP46654 252 aaKnown RBP2.52□□□□□ -2.01
PEP12YOR036W NCS2P53923 493 aaPredicted RBP2.52□□□□□ -2.01
PEP12YOR036W YMR087WQ04299 284 aa2.52□□□□□ -2.01
PEP12YOR036W YLR456WQ06199 204 aa2.52□□□□□ -2.01
PEP12YOR036W VPS54Q12071 889 aa2.52□□□□□ -2.01
PEP12YOR036W LSP1Q12230 341 aaKnown RBP2.52□□□□□ -2.01
PEP12YOR036W MTR10Q99189 972 aa2.52□□□□□ -2.01
PEP12YOR036W LEU4P06208 619 aaKnown RBP2.51□□□□□ -2.01
PEP12YOR036W SRV2P17555 526 aaKnown RBP2.51□□□□□ -2.01
PEP12YOR036W RHB1P25378 209 aa2.51□□□□□ -2.01
PEP12YOR036W KRR1P25586 316 aaPredicted RBP2.51□□□□□ -2.01
PEP12YOR036W BUB3P26449 341 aa2.51□□□□□ -2.01
PEP12YOR036W ERG1P32476 496 aaKnown RBP2.51□□□□□ -2.01
PEP12YOR036W RPN2P32565 945 aaKnown RBP2.51□□□□□ -2.01
PEP12YOR036W RAD24P32641 659 aa2.51□□□□□ -2.01
PEP12YOR036W ZTA1P38230 334 aaKnown RBP2.51□□□□□ -2.01
PEP12YOR036W YIR014WP40570 242 aa2.51□□□□□ -2.01
PEP12YOR036W SAS2P40963 338 aa2.51□□□□□ -2.01
PEP12YOR036W YJR011CP47086 261 aaPredicted RBP2.51□□□□□ -2.01
PEP12YOR036W TDA7P53882 636 aaPredicted RBP2.51□□□□□ -2.01
PEP12YOR036W OCA2P53949 197 aa2.51□□□□□ -2.01
PEP12YOR036W YPL107WQ02873 248 aa2.51□□□□□ -2.01
PEP12YOR036W RPN9Q04062 393 aaKnown RBP2.51□□□□□ -2.01
PEP12YOR036W HSP31Q04432 237 aa2.51□□□□□ -2.01
PEP12YOR036W DIS3Q08162 1001 aaKnown RBP2.51□□□□□ -2.01
PEP12YOR036W PGC1Q08959 321 aa2.51□□□□□ -2.01
PEP12YOR036W SMF3Q12078 473 aaPredicted RBP2.51□□□□□ -2.01
PEP12YOR036W AEP3Q12089 606 aa2.51□□□□□ -2.01
PEP12YOR036W RKM5Q12367 367 aa2.51□□□□□ -2.01
PEP12YOR036W TY1B-AO13527 1196 aaKnown RBP2.5□□□□□ -2.01
PEP12YOR036W COX3P00420 269 aa2.5□□□□□ -2.01
PEP12YOR036W CAR1P00812 333 aaKnown RBP2.5□□□□□ -2.01
PEP12YOR036W ARO3P14843 370 aaKnown RBP2.5□□□□□ -2.01
PEP12YOR036W EXO70P19658 623 aa2.5□□□□□ -2.01
PEP12YOR036W FRE1P32791 686 aa2.5□□□□□ -2.01
PEP12YOR036W ASC1P38011 319 aaKnown RBP2.5□□□□□ -2.01
PEP12YOR036W MLH1P38920 769 aa2.5□□□□□ -2.01
PEP12YOR036W KRE9P39005 276 aa2.5□□□□□ -2.01
PEP12YOR036W MLC1P53141 149 aa2.5□□□□□ -2.01
PEP12YOR036W YGL082WP53155 381 aa2.5□□□□□ -2.01
PEP12YOR036W EOS1P53938 366 aa2.5□□□□□ -2.01
PEP12YOR036W CRZ1P53968 678 aa2.5□□□□□ -2.01
PEP12YOR036W TAF12Q03761 539 aa2.5□□□□□ -2.01
PEP12YOR036W RBA50Q04418 439 aa2.5□□□□□ -2.01
PEP12YOR036W YDR286CQ05530 114 aa2.5□□□□□ -2.01
PEP12YOR036W NDL1Q06568 189 aa2.5□□□□□ -2.01
PEP12YOR036W SYO1Q07395 620 aa2.5□□□□□ -2.01
PEP12YOR036W YEH2Q07950 538 aa2.5□□□□□ -2.01
PEP12YOR036W CUE5Q08412 411 aaKnown RBP2.5□□□□□ -2.01
PEP12YOR036W YDL009CQ12210 107 aa2.5□□□□□ -2.01
PEP12YOR036W FRE6Q12473 712 aa2.5□□□□□ -2.01
PEP12YOR036W HIS4P00815 799 aaKnown RBP2.49□□□□□ -2.01
PEP12YOR036W ADE4P04046 510 aaKnown RBP2.49□□□□□ -2.01
PEP12YOR036W REV1P12689 985 aa2.49□□□□□ -2.01
PEP12YOR036W GLN3P18494 730 aa2.49□□□□□ -2.01
PEP12YOR036W HNM1P19807 563 aa2.49□□□□□ -2.01
PEP12YOR036W SEC62P21825 274 aa2.49□□□□□ -2.01
PEP12YOR036W POT1P27796 417 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
PEP12YOR036W MSP1P28737 362 aa2.49□□□□□ -2.01
PEP12YOR036W SPC110P32380 944 aa2.49□□□□□ -2.01
PEP12YOR036W ECM25P32525 599 aa2.49□□□□□ -2.01
PEP12YOR036W SOR1P35497 357 aaKnown RBP2.49□□□□□ -2.01
PEP12YOR036W UIP5P36137 443 aa2.49□□□□□ -2.01
PEP12YOR036W DAD2P36162 133 aa2.49□□□□□ -2.01
PEP12YOR036W RRN10P38204 145 aa2.49□□□□□ -2.01
PEP12YOR036W GDT1P38301 280 aaPredicted RBP2.49□□□□□ -2.01
PEP12YOR036W PCA1P38360 1216 aa2.49□□□□□ -2.01
PEP12YOR036W FAD1P38913 306 aa2.49□□□□□ -2.01
PEP12YOR036W VPS52P39904 641 aa2.49□□□□□ -2.01
PEP12YOR036W TRS85P46944 698 aa2.49□□□□□ -2.01
PEP12YOR036W BTN2P53286 410 aa2.49□□□□□ -2.01
PEP12YOR036W DSL1P53847 754 aa2.49□□□□□ -2.01
PEP12YOR036W RHO5P53879 331 aaKnown RBP2.49□□□□□ -2.01
PEP12YOR036W RPM2Q02773 1202 aa2.49□□□□□ -2.01
PEP12YOR036W PRP42Q03776 544 aaKnown RBP2.49□□□□□ -2.01
PEP12YOR036W YDR341CQ05506 607 aaKnown RBP2.49□□□□□ -2.01
PEP12YOR036W MRPL51Q06090 140 aaPredicted RBP2.49□□□□□ -2.01
PEP12YOR036W VPS74Q06385 345 aa2.49□□□□□ -2.01
PEP12YOR036W SOR2Q07786 357 aa2.49□□□□□ -2.01
PEP12YOR036W NFI1Q12216 726 aa2.49□□□□□ -2.01
PEP12YOR036W RUP1Q12242 671 aa2.49□□□□□ -2.01
PEP12YOR036W YML002WP0CF17 737 aa2.48□□□□□ -2.01
PEP12YOR036W PMR1P13586 950 aa2.48□□□□□ -2.01
PEP12YOR036W SMY1P32364 656 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W APE2P32454 952 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W SIP2P34164 415 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W YNK1P36010 153 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W OLA1P38219 394 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W YSW1P38280 609 aa2.48□□□□□ -2.01
PEP12YOR036W RRP3P38712 501 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W STN1P38960 494 aa2.48□□□□□ -2.01
PEP12YOR036W YAL037WP39728 267 aa2.48□□□□□ -2.01
PEP12YOR036W YPS6P40583 537 aa2.48□□□□□ -2.01
PEP12YOR036W PHO86P46956 311 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms