RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	STR3	P53101	465 aa	Known RBP	2.99	□□□□□ -1.93
ATG3	YNR007C	RAD30	Q04049	632 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	UTP21	Q06078	939 aa	Predicted RBP	2.99	□□□□□ -1.93
ATG3	YNR007C	ENT4	Q07872	247 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	CLP1	Q08685	445 aa	Predicted RBP	2.99	□□□□□ -1.93
ATG3	YNR007C	GPM2	Q12008	311 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	NMD4	Q12129	218 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	GIS3	Q12418	502 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	YBR126W-A	Q8TGU7	68 aa		2.99	□□□□□ -1.93
ATG3	YNR007C	SEC53	P07283	254 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	PET111	P08468	800 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	YML002W	P0CF17	737 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	RAP1	P11938	827 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	AAC3	P18238	307 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	VPS1	P21576	704 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	VMA16	P23968	213 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	SAC1	P32368	623 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	EFB1	P32471	206 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	RPN2	P32565	945 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	YKL050C	P35736	922 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	SNU114	P36048	1008 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	ARP1	P38696	384 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	ERP2	P39704	215 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	HYR1	P40581	163 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	DUO1	P53168	247 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	HOP2	P53187	214 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	HST1	P53685	503 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	YMR178W	Q03219	274 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	TSR2	Q06672	205 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	TLG2	Q08144	397 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	INP53	Q12271	1107 aa		2.98	□□□□□ -1.93
ATG3	YNR007C	PDH1	Q12428	516 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	ACC1	Q00955	2233 aa	Known RBP	2.98	□□□□□ -1.93
ATG3	YNR007C	COX4	P04037	155 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	PMS1	P14242	873 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	PRP16	P15938	1071 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG3	YNR007C	CLB2	P24869	491 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	STE50	P25344	346 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	MGR1	P25573	417 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	RDS1	P25611	832 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	AUR1	P36107	401 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG3	YNR007C	YPK3	P38070	525 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	TFG2	P41896	400 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG3	YNR007C	RSC1	P53236	928 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	YNL234W	P53857	426 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	TIM8	P57744	87 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	MZM1	Q03429	123 aa	Predicted RBP	2.97	□□□□□ -1.93
ATG3	YNR007C	VPS20	Q04272	221 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	ERV41	Q04651	352 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	YLR297W	Q05899	129 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	YLR352W	Q06479	807 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	MCP2	Q06567	569 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	YDL057W	Q07379	328 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	APL4	Q12028	832 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	RCN2	Q12044	265 aa		2.97	□□□□□ -1.93
ATG3	YNR007C	LSP1	Q12230	341 aa	Known RBP	2.97	□□□□□ -1.93
ATG3	YNR007C	MEX67	Q99257	599 aa	Known RBP	2.97	□□□□□ -1.93
ATG3	YNR007C	YLR422W	Q06409	1932 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	JIP3	O13555	125 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	GCN4	P03069	281 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	OLE1	P21147	510 aa	Known RBP	2.96	□□□□□ -1.94
ATG3	YNR007C	PWP1	P21304	576 aa	Known RBP	2.96	□□□□□ -1.94
ATG3	YNR007C	YCK1	P23291	538 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	YIH1	P25637	258 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	FRE1	P32791	686 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	SGE1	P33335	543 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	BUR6	P40096	142 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	OSW5	P40219	148 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	YTA12	P40341	825 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	YFR020W	P43600	232 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	ROK1	P45818	564 aa	Predicted RBP	2.96	□□□□□ -1.94
ATG3	YNR007C	FAR3	P46671	204 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	DIA3	P52290	468 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	YGR127W	P53275	312 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	ARK1	P53974	638 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	ASI1	P54074	624 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	SLG1	P54867	378 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	PFA5	Q03289	374 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	BUD22	Q04347	519 aa	Known RBP	2.96	□□□□□ -1.94
ATG3	YNR007C	PRM6	Q04705	352 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	ATG9	Q12142	997 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	LEU9	Q12166	604 aa	Known RBP	2.96	□□□□□ -1.94
ATG3	YNR007C	HRT3	Q12347	344 aa		2.96	□□□□□ -1.94
ATG3	YNR007C	DDP1	Q99321	188 aa	Known RBP	2.96	□□□□□ -1.94
ATG3	YNR007C	CHO1	P08456	276 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	BAR1	P12630	587 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	KAR3	P17119	729 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	CMK1	P27466	446 aa	Known RBP	2.95	□□□□□ -1.94
ATG3	YNR007C	SPC110	P32380	944 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	PDR3	P33200	976 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	MIA40	P36046	403 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	DUG2	P38149	878 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	UTP9	P38882	575 aa	Known RBP	2.95	□□□□□ -1.94
ATG3	YNR007C	PCF11	P39081	626 aa	Predicted RBP	2.95	□□□□□ -1.94
ATG3	YNR007C	DSE1	P40077	573 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	CHS6	P40955	746 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	GUF1	P46943	645 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	YJR079W	P47126	109 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	SRB7	P47822	140 aa		2.95	□□□□□ -1.94
ATG3	YNR007C	MRX6	P48564	524 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms