RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YBR298C-AQ8TGK4 73 aa1.99□□□□□ -2.09
SGD1YLR336C CHS1P08004 1131 aa1.98□□□□□ -2.09
SGD1YLR336C ATR1P13090 542 aa1.98□□□□□ -2.09
SGD1YLR336C URA4P20051 364 aa1.98□□□□□ -2.09
SGD1YLR336C KRE2P27809 442 aa1.98□□□□□ -2.09
SGD1YLR336C ECM25P32525 599 aa1.98□□□□□ -2.09
SGD1YLR336C GLC7P32598 312 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C RSM22P36056 628 aa1.98□□□□□ -2.09
SGD1YLR336C YCR041WP37265 110 aa1.98□□□□□ -2.09
SGD1YLR336C SRP72P38688 640 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C YJL213WP40896 331 aa1.98□□□□□ -2.09
SGD1YLR336C YIP1P53039 248 aa1.98□□□□□ -2.09
SGD1YLR336C WSC2P53832 503 aa1.98□□□□□ -2.09
SGD1YLR336C DSL1P53847 754 aa1.98□□□□□ -2.09
SGD1YLR336C DIS3Q08162 1001 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C TY1B-AO13527 1196 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C CYB2P00175 591 aa1.98□□□□□ -2.09
SGD1YLR336C RPI1P23250 407 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C CPR2P23285 205 aa1.98□□□□□ -2.09
SGD1YLR336C YUR1P26725 428 aa1.98□□□□□ -2.09
SGD1YLR336C ITR1P30605 584 aa1.98□□□□□ -2.09
SGD1YLR336C PRO3P32263 286 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C APE2P32454 952 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C SOR1P35497 357 aaKnown RBP1.98□□□□□ -2.09
SGD1YLR336C SLM4P38247 162 aa1.98□□□□□ -2.09
SGD1YLR336C YJR011CP47086 261 aaPredicted RBP1.98□□□□□ -2.09
SGD1YLR336C YML6P51998 286 aa1.98□□□□□ -2.09
SGD1YLR336C PNG1Q02890 363 aa1.98□□□□□ -2.09
SGD1YLR336C ODC1Q03028 310 aa1.98□□□□□ -2.09
SGD1YLR336C SOR2Q07786 357 aa1.98□□□□□ -2.09
SGD1YLR336C PUT3P25502 979 aaPredicted RBP1.97□□□□□ -2.09
SGD1YLR336C REC114P32841 428 aa1.97□□□□□ -2.09
SGD1YLR336C APE3P37302 537 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C OCA2P53949 197 aa1.97□□□□□ -2.09
SGD1YLR336C YPR022CQ12139 1133 aa1.97□□□□□ -2.09
SGD1YLR336C COX3P00420 269 aa1.97□□□□□ -2.09
SGD1YLR336C ILV5P06168 395 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C HIP1P06775 603 aa1.97□□□□□ -2.09
SGD1YLR336C YAR066WP0CX18 203 aa1.97□□□□□ -2.09
SGD1YLR336C YHR214WP0CX19 203 aa1.97□□□□□ -2.09
SGD1YLR336C ARO3P14843 370 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C CLN1P20437 546 aa1.97□□□□□ -2.09
SGD1YLR336C OGG1P53397 376 aaPredicted RBP1.97□□□□□ -2.09
SGD1YLR336C YMR130WQ04223 302 aa1.97□□□□□ -2.09
SGD1YLR336C VPS54Q12071 889 aa1.97□□□□□ -2.09
SGD1YLR336C GPM3Q12326 303 aa1.97□□□□□ -2.09
SGD1YLR336C SAM1P10659 382 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C MDH1P17505 334 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
SGD1YLR336C SRV2P17555 526 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C SAM2P19358 384 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C PXA2P34230 853 aa1.97□□□□□ -2.09
SGD1YLR336C YHR054CP38780 354 aa1.97□□□□□ -2.09
SGD1YLR336C RRP4P38792 359 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C LRP1P38801 184 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C POP6P53218 158 aa1.97□□□□□ -2.09
SGD1YLR336C RPT4P53549 437 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C FRE4P53746 719 aa1.97□□□□□ -2.09
SGD1YLR336C HEL2Q05580 639 aaKnown RBP1.97□□□□□ -2.09
SGD1YLR336C YTH1Q06102 208 aaPredicted RBP1.97□□□□□ -2.09
SGD1YLR336C SCEIP03882 235 aa1.96□□□□□ -2.1
SGD1YLR336C SPO7P18410 259 aa1.96□□□□□ -2.1
SGD1YLR336C CTR86P25355 563 aa1.96□□□□□ -2.1
SGD1YLR336C BRF1P29056 596 aa1.96□□□□□ -2.1
SGD1YLR336C PCA1P38360 1216 aa1.96□□□□□ -2.1
SGD1YLR336C PHO86P46956 311 aa1.96□□□□□ -2.1
SGD1YLR336C RTT103Q05543 409 aa1.96□□□□□ -2.1
SGD1YLR336C DCS1Q06151 350 aa1.96□□□□□ -2.1
SGD1YLR336C UAF30Q08747 228 aa1.96□□□□□ -2.1
SGD1YLR336C PPT2Q12036 173 aa1.96□□□□□ -2.1
SGD1YLR336C HSP42Q12329 375 aa1.96□□□□□ -2.1
SGD1YLR336C ORT1Q12375 292 aa1.96□□□□□ -2.1
SGD1YLR336C PHO2P07269 559 aa1.96□□□□□ -2.1
SGD1YLR336C CPR1P14832 162 aaKnown RBP1.96□□□□□ -2.1
SGD1YLR336C MMS4P38257 691 aa1.96□□□□□ -2.1
SGD1YLR336C TIF5P38431 405 aaKnown RBP1.96□□□□□ -2.1
SGD1YLR336C IDP2P41939 412 aa1.96□□□□□ -2.1
SGD1YLR336C HOT1Q03213 719 aa1.96□□□□□ -2.1
SGD1YLR336C GYL1Q04322 720 aa1.96□□□□□ -2.1
SGD1YLR336C SNT309Q06091 175 aaPredicted RBP1.96□□□□□ -2.1
SGD1YLR336C YCL021W-AQ96VH3 125 aa1.96□□□□□ -2.1
SGD1YLR336C HIS4P00815 799 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C LPD1P09624 499 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C CDC60P26637 1090 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C TIP1P27654 210 aaPredicted RBP1.95□□□□□ -2.1
SGD1YLR336C SMY1P32364 656 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C RGT1P32862 1170 aa1.95□□□□□ -2.1
SGD1YLR336C ASC1P38011 319 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C YHR218WP38899 603 aa1.95□□□□□ -2.1
SGD1YLR336C HMS2P47175 358 aa1.95□□□□□ -2.1
SGD1YLR336C TOM22P49334 152 aa1.95□□□□□ -2.1
SGD1YLR336C PHB2P50085 310 aa1.95□□□□□ -2.1
SGD1YLR336C YGR111WP53265 400 aa1.95□□□□□ -2.1
SGD1YLR336C MSO1P53604 210 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C CAF40P53829 373 aa1.95□□□□□ -2.1
SGD1YLR336C GOR1P53839 350 aa1.95□□□□□ -2.1
SGD1YLR336C OAZ1Q02803 292 aa1.95□□□□□ -2.1
SGD1YLR336C THP3Q12049 470 aaKnown RBP1.95□□□□□ -2.1
SGD1YLR336C SNU66Q12420 587 aaPredicted RBP1.95□□□□□ -2.1
SGD1YLR336C RMD5Q12508 421 aa1.95□□□□□ -2.1
SGD1YLR336C MRP4P32902 394 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms