RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W YLL056CQ12177 298 aa2.23□□□□□ -2.05
RPL40AYIL148W YPT1P01123 206 aaKnown RBP2.22□□□□□ -2.05
RPL40AYIL148W ARG4P04076 463 aaPredicted RBP2.22□□□□□ -2.05
RPL40AYIL148W KRE2P27809 442 aa2.22□□□□□ -2.05
RPL40AYIL148W LTV1P34078 463 aa2.22□□□□□ -2.05
RPL40AYIL148W PIM1P36775 1133 aa2.22□□□□□ -2.05
RPL40AYIL148W RRN10P38204 145 aa2.22□□□□□ -2.05
RPL40AYIL148W SLM4P38247 162 aa2.22□□□□□ -2.05
RPL40AYIL148W YND1P40009 630 aa2.22□□□□□ -2.05
RPL40AYIL148W LCB2P40970 561 aa2.22□□□□□ -2.05
RPL40AYIL148W YJR011CP47086 261 aaPredicted RBP2.22□□□□□ -2.05
RPL40AYIL148W PIB2P53191 635 aa2.22□□□□□ -2.05
RPL40AYIL148W POP6P53218 158 aa2.22□□□□□ -2.05
RPL40AYIL148W CAF40P53829 373 aa2.22□□□□□ -2.05
RPL40AYIL148W YMR087WQ04299 284 aa2.22□□□□□ -2.05
RPL40AYIL148W HEL2Q05580 639 aaKnown RBP2.22□□□□□ -2.05
RPL40AYIL148W YPL199CQ08954 240 aa2.22□□□□□ -2.05
RPL40AYIL148W KEL3Q08979 651 aaPredicted RBP2.22□□□□□ -2.05
RPL40AYIL148W BUG1Q12191 341 aa2.22□□□□□ -2.05
RPL40AYIL148W GPM3Q12326 303 aa2.22□□□□□ -2.05
RPL40AYIL148W MTR10Q99189 972 aa2.22□□□□□ -2.05
RPL40AYIL148W LPD1P09624 499 aaKnown RBP2.21□□□□□ -2.06
RPL40AYIL148W ATR1P13090 542 aa2.21□□□□□ -2.06
RPL40AYIL148W AMD1P15274 810 aaKnown RBP2.21□□□□□ -2.06
RPL40AYIL148W SPO12P17123 173 aa2.21□□□□□ -2.06
RPL40AYIL148W SIN4P32259 974 aa2.21□□□□□ -2.06
RPL40AYIL148W ECM25P32525 599 aa2.21□□□□□ -2.06
RPL40AYIL148W SWI3P32591 825 aa2.21□□□□□ -2.06
RPL40AYIL148W YCR041WP37265 110 aa2.21□□□□□ -2.06
RPL40AYIL148W YBR056WP38081 501 aa2.21□□□□□ -2.06
RPL40AYIL148W MTC4P38335 694 aaKnown RBP2.21□□□□□ -2.06
RPL40AYIL148W LRP1P38801 184 aaKnown RBP2.21□□□□□ -2.06
RPL40AYIL148W PCF11P39081 626 aaPredicted RBP2.21□□□□□ -2.06
RPL40AYIL148W RPH1P39956 796 aa2.21□□□□□ -2.06
RPL40AYIL148W YJL132WP47014 750 aa2.21□□□□□ -2.06
RPL40AYIL148W HMS2P47175 358 aa2.21□□□□□ -2.06
RPL40AYIL148W TCB2P48231 1178 aa2.21□□□□□ -2.06
RPL40AYIL148W YIP1P53039 248 aa2.21□□□□□ -2.06
RPL40AYIL148W YGL260WP53056 76 aa2.21□□□□□ -2.06
RPL40AYIL148W RPT4P53549 437 aaKnown RBP2.21□□□□□ -2.06
RPL40AYIL148W OAZ1Q02803 292 aa2.21□□□□□ -2.06
RPL40AYIL148W ODC1Q03028 310 aa2.21□□□□□ -2.06
RPL40AYIL148W PIR3Q03180 325 aa2.21□□□□□ -2.06
RPL40AYIL148W YLR345WQ06137 509 aa2.21□□□□□ -2.06
RPL40AYIL148W SGT1Q08446 395 aa2.21□□□□□ -2.06
RPL40AYIL148W PPT2Q12036 173 aa2.21□□□□□ -2.06
RPL40AYIL148W RKM5Q12367 367 aa2.21□□□□□ -2.06
RPL40AYIL148W PAR32Q12515 295 aaKnown RBP2.21□□□□□ -2.06
RPL40AYIL148W TY1B-AO13527 1196 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W HSP82P02829 709 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W SCEIP03882 235 aa2.2□□□□□ -2.06
RPL40AYIL148W PMR1P13586 950 aa2.2□□□□□ -2.06
RPL40AYIL148W CPR1P14832 162 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W CDC23P16522 626 aa2.2□□□□□ -2.06
RPL40AYIL148W SPC110P32380 944 aa2.2□□□□□ -2.06
RPL40AYIL148W RIM1P32445 135 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W PMU1P36069 295 aa2.2□□□□□ -2.06
RPL40AYIL148W OLA1P38219 394 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W LYS1P38998 373 aaRIP-Chip data2.2□□□□□ -2.06not detected
RPL40AYIL148W CCT2P39076 527 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W SEC28P40509 296 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W SAS2P40963 338 aa2.2□□□□□ -2.06
RPL40AYIL148W VMA13P41807 478 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W LAM5P43560 674 aa2.2□□□□□ -2.06
RPL40AYIL148W YFR016CP43597 1233 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W BRO1P48582 844 aa2.2□□□□□ -2.06
RPL40AYIL148W FRE4P53746 719 aa2.2□□□□□ -2.06
RPL40AYIL148W MDG1P53885 366 aa2.2□□□□□ -2.06
RPL40AYIL148W RPM2Q02773 1202 aa2.2□□□□□ -2.06
RPL40AYIL148W MRP51Q02950 344 aa2.2□□□□□ -2.06
RPL40AYIL148W BET5Q03630 159 aa2.2□□□□□ -2.06
RPL40AYIL148W ERP1Q05359 219 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W MMR1Q06324 491 aa2.2□□□□□ -2.06
RPL40AYIL148W SPE3Q12074 293 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W PKH2Q12236 1081 aaKnown RBP2.2□□□□□ -2.06
RPL40AYIL148W TEF1P02994 458 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W RPL6BP05739 176 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W RPL15AP05748 204 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W SAM1P10659 382 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W SAM2P19358 384 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W GLC7P32598 312 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W SOR1P35497 357 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W SWH1P35845 1188 aa2.19□□□□□ -2.06
RPL40AYIL148W NAT2P37293 288 aa2.19□□□□□ -2.06
RPL40AYIL148W ZTA1P38230 334 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W GDT1P38301 280 aaPredicted RBP2.19□□□□□ -2.06
RPL40AYIL148W PCA1P38360 1216 aa2.19□□□□□ -2.06
RPL40AYIL148W WSS1P38838 269 aa2.19□□□□□ -2.06
RPL40AYIL148W KEL1P38853 1164 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W YMR147WP40218 223 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W YJL213WP40896 331 aa2.19□□□□□ -2.06
RPL40AYIL148W TRS85P46944 698 aa2.19□□□□□ -2.06
RPL40AYIL148W AVT4P50944 713 aa2.19□□□□□ -2.06
RPL40AYIL148W IBD2P53892 351 aa2.19□□□□□ -2.06
RPL40AYIL148W ALF1P53904 254 aa2.19□□□□□ -2.06
RPL40AYIL148W OCA2P53949 197 aa2.19□□□□□ -2.06
RPL40AYIL148W RPL6AQ02326 176 aaKnown RBP2.19□□□□□ -2.06
RPL40AYIL148W YMR317WQ04893 1140 aa2.19□□□□□ -2.06
RPL40AYIL148W SOR2Q07786 357 aa2.19□□□□□ -2.06
RPL40AYIL148W TIM18Q08749 192 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms