RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W INH1P01097 85 aa2.52□□□□□ -2.01
SSF1YHR066W SPT15P13393 240 aaKnown RBP2.52□□□□□ -2.01
SSF1YHR066W ITR1P30605 584 aa2.52□□□□□ -2.01
SSF1YHR066W ECM25P32525 599 aa2.52□□□□□ -2.01
SSF1YHR066W SWH1P35845 1188 aa2.52□□□□□ -2.01
SSF1YHR066W JNM1P36224 373 aa2.52□□□□□ -2.01
SSF1YHR066W OTU2P38747 307 aaKnown RBP2.52□□□□□ -2.01
SSF1YHR066W OST1P41543 476 aaKnown RBP2.52□□□□□ -2.01
SSF1YHR066W YFL067WP43537 175 aa2.52□□□□□ -2.01
SSF1YHR066W VTC2P43585 828 aa2.52□□□□□ -2.01
SSF1YHR066W YIP1P53039 248 aa2.52□□□□□ -2.01
SSF1YHR066W ELP3Q02908 557 aaKnown RBP2.52□□□□□ -2.01
SSF1YHR066W HSP31Q04432 237 aa2.52□□□□□ -2.01
SSF1YHR066W YPL199CQ08954 240 aa2.52□□□□□ -2.01
SSF1YHR066W TMS1Q12116 473 aa2.52□□□□□ -2.01
SSF1YHR066W RRP12Q12754 1228 aaKnown RBP2.52□□□□□ -2.01
SSF1YHR066W GPH1P06738 902 aaKnown RBP2.51□□□□□ -2.01
SSF1YHR066W CPR4P25334 318 aa2.51□□□□□ -2.01
SSF1YHR066W SNT1P25357 1226 aa2.51□□□□□ -2.01
SSF1YHR066W RFC3P38629 340 aa2.51□□□□□ -2.01
SSF1YHR066W NDT80P38830 627 aa2.51□□□□□ -2.01
SSF1YHR066W SAS2P40963 338 aa2.51□□□□□ -2.01
SSF1YHR066W DLD2P46681 530 aaKnown RBP2.51□□□□□ -2.01
SSF1YHR066W SRB7P47822 140 aa2.51□□□□□ -2.01
SSF1YHR066W YGL242CP53066 181 aa2.51□□□□□ -2.01
SSF1YHR066W MRP51Q02950 344 aa2.51□□□□□ -2.01
SSF1YHR066W SYF1Q04048 859 aaPredicted RBP2.51□□□□□ -2.01
SSF1YHR066W PBA1Q05778 276 aa2.51□□□□□ -2.01
SSF1YHR066W VTA1Q06263 330 aa2.51□□□□□ -2.01
SSF1YHR066W ESA1Q08649 445 aa2.51□□□□□ -2.01
SSF1YHR066W YPR022CQ12139 1133 aa2.51□□□□□ -2.01
SSF1YHR066W REV1P12689 985 aa2.5□□□□□ -2.01
SSF1YHR066W TIP1P27654 210 aaPredicted RBP2.5□□□□□ -2.01
SSF1YHR066W DEG1P31115 442 aaKnown RBP2.5□□□□□ -2.01
SSF1YHR066W APE2P32454 952 aaKnown RBP2.5□□□□□ -2.01
SSF1YHR066W RML2P32611 393 aa2.5□□□□□ -2.01
SSF1YHR066W NPL6P32832 435 aa2.5□□□□□ -2.01
SSF1YHR066W REC114P32841 428 aa2.5□□□□□ -2.01
SSF1YHR066W YBL059WP34224 193 aa2.5□□□□□ -2.01
SSF1YHR066W VHC1P38329 1120 aa2.5□□□□□ -2.01
SSF1YHR066W MST28P39552 234 aa2.5□□□□□ -2.01
SSF1YHR066W MNP1P53163 194 aaPredicted RBP2.5□□□□□ -2.01
SSF1YHR066W YGR250CP53316 781 aaKnown RBP2.5□□□□□ -2.01
SSF1YHR066W YIF1P53845 314 aaKnown RBP2.5□□□□□ -2.01
SSF1YHR066W DSL1P53847 754 aa2.5□□□□□ -2.01
SSF1YHR066W IBD2P53892 351 aa2.5□□□□□ -2.01
SSF1YHR066W ARX1Q03862 593 aaKnown RBP2.5□□□□□ -2.01
SSF1YHR066W SMA2Q04658 369 aa2.5□□□□□ -2.01
SSF1YHR066W RRN11Q04712 507 aa2.5□□□□□ -2.01
SSF1YHR066W YLR287CQ05881 355 aa2.5□□□□□ -2.01
SSF1YHR066W MDM30Q05930 598 aa2.5□□□□□ -2.01
SSF1YHR066W MRPL35Q06678 367 aa2.5□□□□□ -2.01
SSF1YHR066W RAD61Q99359 647 aa2.5□□□□□ -2.01
SSF1YHR066W MYO2P19524 1574 aaKnown RBP2.5□□□□□ -2.01
SSF1YHR066W SSK2P53599 1579 aa2.5□□□□□ -2.01
SSF1YHR066W ESC1Q03661 1658 aaKnown RBP2.5□□□□□ -2.01
SSF1YHR066W BNI1P41832 1953 aa2.5□□□□□ -2.01
SSF1YHR066W RPI1P23250 407 aaKnown RBP2.49□□□□□ -2.01
SSF1YHR066W GEX1P25596 615 aa2.49□□□□□ -2.01
SSF1YHR066W SIN4P32259 974 aa2.49□□□□□ -2.01
SSF1YHR066W HCS1P34243 683 aa2.49□□□□□ -2.01
SSF1YHR066W LSM5P40089 93 aaKnown RBP2.49□□□□□ -2.01
SSF1YHR066W GPD2P41911 440 aaKnown RBP2.49□□□□□ -2.01
SSF1YHR066W ECM27P47144 725 aa2.49□□□□□ -2.01
SSF1YHR066W TOF1P53840 1238 aa2.49□□□□□ -2.01
SSF1YHR066W HXT11P54862 567 aa2.49□□□□□ -2.01
SSF1YHR066W TSR1Q07381 788 aaKnown RBP2.49□□□□□ -2.01
SSF1YHR066W YLR108CQ12259 485 aa2.49□□□□□ -2.01
SSF1YHR066W ISN1Q99312 450 aa2.49□□□□□ -2.01
SSF1YHR066W RPA190P10964 1664 aaKnown RBP2.49□□□□□ -2.01
SSF1YHR066W HHF1P02309 103 aaKnown RBP2.49□□□□□ -2.01
SSF1YHR066W CLB3P24870 427 aa2.49□□□□□ -2.01
SSF1YHR066W LDB16P25587 256 aa2.49□□□□□ -2.01
SSF1YHR066W PAD1P33751 242 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SSF1YHR066W STB6P36085 766 aa2.49□□□□□ -2.01
SSF1YHR066W RIB5P38145 238 aa2.49□□□□□ -2.01
SSF1YHR066W YBR137WP38276 179 aa2.49□□□□□ -2.01
SSF1YHR066W FAA2P39518 744 aa2.49□□□□□ -2.01
SSF1YHR066W REE1P40893 198 aa2.49□□□□□ -2.01
SSF1YHR066W LAM5P43560 674 aa2.49□□□□□ -2.01
SSF1YHR066W FRE4P53746 719 aa2.49□□□□□ -2.01
SSF1YHR066W YMR155WQ03795 547 aa2.49□□□□□ -2.01
SSF1YHR066W TIM18Q08749 192 aa2.49□□□□□ -2.01
SSF1YHR066W MUM3Q08750 479 aa2.49□□□□□ -2.01
SSF1YHR066W PKH2Q12236 1081 aaKnown RBP2.49□□□□□ -2.01
SSF1YHR066W SCM3Q12334 223 aa2.49□□□□□ -2.01
SSF1YHR066W SNU66Q12420 587 aaPredicted RBP2.49□□□□□ -2.01
SSF1YHR066W ATG2P53855 1592 aa2.48□□□□□ -2.01
SSF1YHR066W YCF1P39109 1515 aaKnown RBP2.48□□□□□ -2.01
SSF1YHR066W HIS4P00815 799 aaKnown RBP2.48□□□□□ -2.01
SSF1YHR066W ILV5P06168 395 aaKnown RBP2.48□□□□□ -2.01
SSF1YHR066W BLI1P35727 113 aa2.48□□□□□ -2.01
SSF1YHR066W SWD3P38123 315 aa2.48□□□□□ -2.01
SSF1YHR066W DED81P38707 554 aaKnown RBP2.48□□□□□ -2.01
SSF1YHR066W YHR054CP38780 354 aa2.48□□□□□ -2.01
SSF1YHR066W PRM5P40476 318 aa2.48□□□□□ -2.01
SSF1YHR066W YGR210CP42942 411 aa2.48□□□□□ -2.01
SSF1YHR066W RPS0BP46654 252 aaKnown RBP2.48□□□□□ -2.01
SSF1YHR066W YJR011CP47086 261 aaPredicted RBP2.48□□□□□ -2.01
SSF1YHR066W SSN8P47821 323 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms