RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W MDM30Q05930 598 aa3.15□□□□□ -1.91
SEC4YFL005W MMR1Q06324 491 aa3.15□□□□□ -1.91
SEC4YFL005W AYT1Q12226 474 aa3.15□□□□□ -1.91
SEC4YFL005W SET6Q12529 373 aa3.15□□□□□ -1.91
SEC4YFL005W HIS4P00815 799 aaKnown RBP3.14□□□□□ -1.91
SEC4YFL005W YAR066WP0CX18 203 aa3.14□□□□□ -1.91
SEC4YFL005W YHR214WP0CX19 203 aa3.14□□□□□ -1.91
SEC4YFL005W RPL20AP0CX23 172 aaKnown RBP3.14□□□□□ -1.91
SEC4YFL005W RPL20BP0CX24 172 aaPredicted RBP3.14□□□□□ -1.91
SEC4YFL005W CLN1P20437 546 aa3.14□□□□□ -1.91
SEC4YFL005W YCR100CP25606 316 aa3.14□□□□□ -1.91
SEC4YFL005W CRM1P30822 1084 aaKnown RBP3.14□□□□□ -1.91
SEC4YFL005W ATS1P31386 333 aa3.14□□□□□ -1.91
SEC4YFL005W NDI1P32340 513 aa3.14□□□□□ -1.91
SEC4YFL005W APE2P32454 952 aaKnown RBP3.14□□□□□ -1.91
SEC4YFL005W ECM25P32525 599 aa3.14□□□□□ -1.91
SEC4YFL005W LOS1P33418 1100 aaPredicted RBP3.14□□□□□ -1.91
SEC4YFL005W PMU1P36069 295 aa3.14□□□□□ -1.91
SEC4YFL005W YHR054CP38780 354 aa3.14□□□□□ -1.91
SEC4YFL005W MDM31P38880 579 aa3.14□□□□□ -1.91
SEC4YFL005W TRS85P46944 698 aa3.14□□□□□ -1.91
SEC4YFL005W ECM27P47144 725 aa3.14□□□□□ -1.91
SEC4YFL005W COS10P52924 374 aa3.14□□□□□ -1.91
SEC4YFL005W PCP1P53259 346 aa3.14□□□□□ -1.91
SEC4YFL005W YGR111WP53265 400 aa3.14□□□□□ -1.91
SEC4YFL005W YIF1P53845 314 aaKnown RBP3.14□□□□□ -1.91
SEC4YFL005W ODC1Q03028 310 aa3.14□□□□□ -1.91
SEC4YFL005W DCS1Q06151 350 aa3.14□□□□□ -1.91
SEC4YFL005W DIS3Q08162 1001 aaKnown RBP3.14□□□□□ -1.91
SEC4YFL005W VPS54Q12071 889 aa3.14□□□□□ -1.91
SEC4YFL005W CTF3Q12748 733 aa3.14□□□□□ -1.91
SEC4YFL005W SCEIP03882 235 aa3.13□□□□□ -1.91
SEC4YFL005W SPO7P18410 259 aa3.13□□□□□ -1.91
SEC4YFL005W RPI1P23250 407 aaKnown RBP3.13□□□□□ -1.91
SEC4YFL005W CDC60P26637 1090 aaKnown RBP3.13□□□□□ -1.91
SEC4YFL005W PRO3P32263 286 aaKnown RBP3.13□□□□□ -1.91
SEC4YFL005W GLC7P32598 312 aaKnown RBP3.13□□□□□ -1.91
SEC4YFL005W GCD10P41814 478 aa3.13□□□□□ -1.91
SEC4YFL005W YIP1P53039 248 aa3.13□□□□□ -1.91
SEC4YFL005W ARK1P53974 638 aa3.13□□□□□ -1.91
SEC4YFL005W SXM1Q04175 944 aaKnown RBP3.13□□□□□ -1.91
SEC4YFL005W BUG1Q12191 341 aa3.13□□□□□ -1.91
SEC4YFL005W LPD1P09624 499 aaKnown RBP3.12□□□□□ -1.91
SEC4YFL005W PUT3P25502 979 aaPredicted RBP3.12□□□□□ -1.91
SEC4YFL005W LTV1P34078 463 aa3.12□□□□□ -1.91
SEC4YFL005W YCR041WP37265 110 aa3.12□□□□□ -1.91
SEC4YFL005W TOM22P49334 152 aa3.12□□□□□ -1.91
SEC4YFL005W AVT4P50944 713 aa3.12□□□□□ -1.91
SEC4YFL005W YGL260WP53056 76 aa3.12□□□□□ -1.91
SEC4YFL005W OAZ1Q02803 292 aa3.12□□□□□ -1.91
SEC4YFL005W UAF30Q08747 228 aa3.12□□□□□ -1.91
SEC4YFL005W AEP3Q12089 606 aa3.12□□□□□ -1.91
SEC4YFL005W TIP41Q12199 356 aa3.12□□□□□ -1.91
SEC4YFL005W GPM3Q12326 303 aa3.12□□□□□ -1.91
SEC4YFL005W MTR10Q99189 972 aa3.12□□□□□ -1.91
SEC4YFL005W HSP82P02829 709 aaKnown RBP3.11□□□□□ -1.91
SEC4YFL005W HEM2P05373 342 aa3.11□□□□□ -1.91
SEC4YFL005W GDH1P07262 454 aaKnown RBP3.11□□□□□ -1.91
SEC4YFL005W MCK1P21965 375 aaKnown RBP3.11□□□□□ -1.91
SEC4YFL005W MNE1P24720 663 aa3.11□□□□□ -1.91
SEC4YFL005W SOR1P35497 357 aaKnown RBP3.11□□□□□ -1.91
SEC4YFL005W LYS1P38998 373 aaRIP-Chip data3.11□□□□□ -1.91not detected
SEC4YFL005W SER3P40054 469 aa3.11□□□□□ -1.91
SEC4YFL005W YJL213WP40896 331 aa3.11□□□□□ -1.91
SEC4YFL005W RRT5P43607 289 aa3.11□□□□□ -1.91
SEC4YFL005W YJL132WP47014 750 aa3.11□□□□□ -1.91
SEC4YFL005W SSN8P47821 323 aa3.11□□□□□ -1.91
SEC4YFL005W YDL186WP48568 277 aa3.11□□□□□ -1.91
SEC4YFL005W POP6P53218 158 aa3.11□□□□□ -1.91
SEC4YFL005W CAF40P53829 373 aa3.11□□□□□ -1.91
SEC4YFL005W PIR3Q03180 325 aa3.11□□□□□ -1.91
SEC4YFL005W TAF12Q03761 539 aa3.11□□□□□ -1.91
SEC4YFL005W GYL1Q04322 720 aa3.11□□□□□ -1.91
SEC4YFL005W HEL2Q05580 639 aaKnown RBP3.11□□□□□ -1.91
SEC4YFL005W SOR2Q07786 357 aa3.11□□□□□ -1.91
SEC4YFL005W REX4Q08237 289 aa3.11□□□□□ -1.91
SEC4YFL005W DCI1Q08558 271 aa3.11□□□□□ -1.91
SEC4YFL005W MUM3Q08750 479 aa3.11□□□□□ -1.91
SEC4YFL005W PPT2Q12036 173 aa3.11□□□□□ -1.91
SEC4YFL005W SNU66Q12420 587 aaPredicted RBP3.11□□□□□ -1.91
SEC4YFL005W TY1B-AO13527 1196 aaKnown RBP3.1□□□□□ -1.91
SEC4YFL005W CTR86P25355 563 aa3.1□□□□□ -1.91
SEC4YFL005W SMY1P32364 656 aaKnown RBP3.1□□□□□ -1.91
SEC4YFL005W SWH1P35845 1188 aa3.1□□□□□ -1.91
SEC4YFL005W FMP46P36141 133 aaKnown RBP3.1□□□□□ -1.91
SEC4YFL005W RRN10P38204 145 aa3.1□□□□□ -1.91
SEC4YFL005W JEM1P40358 645 aa3.1□□□□□ -1.91
SEC4YFL005W VHS2P40463 436 aa3.1□□□□□ -1.91
SEC4YFL005W PHO86P46956 311 aa3.1□□□□□ -1.91
SEC4YFL005W YJL055WP47044 245 aa3.1□□□□□ -1.91
SEC4YFL005W MRP51Q02950 344 aa3.1□□□□□ -1.91
SEC4YFL005W RCF1Q03713 159 aa3.1□□□□□ -1.91
SEC4YFL005W SGT1Q08446 395 aa3.1□□□□□ -1.91
SEC4YFL005W SPE3Q12074 293 aaKnown RBP3.1□□□□□ -1.91
SEC4YFL005W ORT1Q12375 292 aa3.1□□□□□ -1.91
SEC4YFL005W PAR32Q12515 295 aaKnown RBP3.1□□□□□ -1.91
SEC4YFL005W YBR298C-AQ8TGK4 73 aa3.1□□□□□ -1.91
SEC4YFL005W ADE4P04046 510 aaKnown RBP3.09□□□□□ -1.91
SEC4YFL005W ARG4P04076 463 aaPredicted RBP3.09□□□□□ -1.91
SEC4YFL005W ARO3P14843 370 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms