RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C SOL4P53315 255 aa3.91□□□□□ -1.78
SPB4YFL002C TIM11P81449 96 aaPredicted RBP3.91□□□□□ -1.78
SPB4YFL002C RDR1Q08904 546 aa3.91□□□□□ -1.78
SPB4YFL002C YLR111WQ12528 110 aa3.91□□□□□ -1.78
SPB4YFL002C MES1P00958 751 aaKnown RBP3.91□□□□□ -1.78
SPB4YFL002C NFT1P0CE68 1218 aa3.91□□□□□ -1.78
SPB4YFL002C SNC1P31109 117 aa3.91□□□□□ -1.78
SPB4YFL002C CBP4P37267 147 aa3.91□□□□□ -1.78
SPB4YFL002C KAP104P38217 918 aaKnown RBP3.91□□□□□ -1.78
SPB4YFL002C SPC97P38863 823 aa3.91□□□□□ -1.78
SPB4YFL002C MNN9P39107 395 aaKnown RBP3.91□□□□□ -1.78
SPB4YFL002C PHO86P46956 311 aa3.91□□□□□ -1.78
SPB4YFL002C RHO4Q00246 291 aa3.91□□□□□ -1.78
SPB4YFL002C YPL014WQ02606 381 aa3.91□□□□□ -1.78
SPB4YFL002C TPO3Q06451 622 aa3.91□□□□□ -1.78
SPB4YFL002C YDL218WQ07629 317 aa3.91□□□□□ -1.78
SPB4YFL002C CEX1Q12453 761 aa3.91□□□□□ -1.78
SPB4YFL002C RAD61Q99359 647 aa3.91□□□□□ -1.78
SPB4YFL002C GAL7P08431 366 aa3.9□□□□□ -1.79
SPB4YFL002C ERG11P10614 530 aa3.9□□□□□ -1.79
SPB4YFL002C BAR1P12630 587 aa3.9□□□□□ -1.79
SPB4YFL002C PUT4P15380 627 aa3.9□□□□□ -1.79
SPB4YFL002C ECM25P32525 599 aa3.9□□□□□ -1.79
SPB4YFL002C UTR4P32626 227 aa3.9□□□□□ -1.79
SPB4YFL002C RAD24P32641 659 aa3.9□□□□□ -1.79
SPB4YFL002C YSC83P32792 385 aa3.9□□□□□ -1.79
SPB4YFL002C MOH1P38191 138 aa3.9□□□□□ -1.79
SPB4YFL002C YBL028CP38202 106 aa3.9□□□□□ -1.79
SPB4YFL002C PCF11P39081 626 aaPredicted RBP3.9□□□□□ -1.79
SPB4YFL002C YPS6P40583 537 aa3.9□□□□□ -1.79
SPB4YFL002C IRC7P43623 340 aa3.9□□□□□ -1.79
SPB4YFL002C CUR1Q06469 252 aa3.9□□□□□ -1.79
SPB4YFL002C SSK1Q07084 712 aa3.9□□□□□ -1.79
SPB4YFL002C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SPB4YFL002C VPS63O13549 108 aa3.89□□□□□ -1.79
SPB4YFL002C CDC37P06101 506 aaKnown RBP3.89□□□□□ -1.79
SPB4YFL002C SAM1P10659 382 aaKnown RBP3.89□□□□□ -1.79
SPB4YFL002C PET18P25362 215 aa3.89□□□□□ -1.79
SPB4YFL002C NRP1P32770 719 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SPB4YFL002C OAR1P35731 278 aa3.89□□□□□ -1.79
SPB4YFL002C QDR3P38227 689 aa3.89□□□□□ -1.79
SPB4YFL002C RRP4P38792 359 aaKnown RBP3.89□□□□□ -1.79
SPB4YFL002C YFR018CP43599 363 aa3.89□□□□□ -1.79
SPB4YFL002C DSL1P53847 754 aa3.89□□□□□ -1.79
SPB4YFL002C FMP30Q02883 468 aa3.89□□□□□ -1.79
SPB4YFL002C SMA2Q04658 369 aa3.89□□□□□ -1.79
SPB4YFL002C MCP2Q06567 569 aa3.89□□□□□ -1.79
SPB4YFL002C RPS2P25443 254 aaKnown RBP3.88□□□□□ -1.79
SPB4YFL002C SMY1P32364 656 aaKnown RBP3.88□□□□□ -1.79
SPB4YFL002C YBR139WP38109 508 aa3.88□□□□□ -1.79
SPB4YFL002C LEU5P38702 357 aa3.88□□□□□ -1.79
SPB4YFL002C INM1P38710 295 aa3.88□□□□□ -1.79
SPB4YFL002C YMR124WP39523 943 aaKnown RBP3.88□□□□□ -1.79
SPB4YFL002C PAC11P40960 533 aa3.88□□□□□ -1.79
SPB4YFL002C LOC1P43586 204 aaPredicted RBP3.88□□□□□ -1.79
SPB4YFL002C BRO1P48582 844 aa3.88□□□□□ -1.79
SPB4YFL002C SHE10P53075 577 aa3.88□□□□□ -1.79
SPB4YFL002C YIF1P53845 314 aaKnown RBP3.88□□□□□ -1.79
SPB4YFL002C RRN5Q02983 363 aa3.88□□□□□ -1.79
SPB4YFL002C TAF12Q03761 539 aa3.88□□□□□ -1.79
SPB4YFL002C YDR387CQ04162 555 aa3.88□□□□□ -1.79
SPB4YFL002C CAC2Q04199 468 aa3.88□□□□□ -1.79
SPB4YFL002C YLR413WQ06689 675 aa3.88□□□□□ -1.79
SPB4YFL002C PFA4Q12006 378 aa3.88□□□□□ -1.79
SPB4YFL002C EDE1P34216 1381 aa3.88□□□□□ -1.79
SPB4YFL002C THR4P16120 514 aaKnown RBP3.88□□□□□ -1.79
SPB4YFL002C PSO2P30620 661 aa3.88□□□□□ -1.79
SPB4YFL002C PTK1P36002 662 aaPredicted RBP3.88□□□□□ -1.79
SPB4YFL002C MIC60P36112 540 aa3.88□□□□□ -1.79
SPB4YFL002C ATP3P38077 311 aaKnown RBP3.88□□□□□ -1.79
SPB4YFL002C TRS85P46944 698 aa3.88□□□□□ -1.79
SPB4YFL002C NUP100Q02629 959 aa3.88□□□□□ -1.79
SPB4YFL002C CTL1Q03220 320 aaKnown RBP3.88□□□□□ -1.79
SPB4YFL002C RNH1Q04740 348 aa3.88□□□□□ -1.79
SPB4YFL002C CHS1P08004 1131 aa3.87□□□□□ -1.79
SPB4YFL002C SPO11P23179 398 aa3.87□□□□□ -1.79
SPB4YFL002C IME2P32581 645 aa3.87□□□□□ -1.79
SPB4YFL002C CYS4P32582 507 aaKnown RBP3.87□□□□□ -1.79
SPB4YFL002C FLO10P36170 1169 aa3.87□□□□□ -1.79
SPB4YFL002C SPP381P38282 291 aaPredicted RBP3.87□□□□□ -1.79
SPB4YFL002C SMC2P38989 1170 aaKnown RBP3.87□□□□□ -1.79
SPB4YFL002C FAU1P40099 211 aa3.87□□□□□ -1.79
SPB4YFL002C GPI1P53306 609 aa3.87□□□□□ -1.79
SPB4YFL002C ECM18Q04623 453 aa3.87□□□□□ -1.79
SPB4YFL002C YOR012WQ12351 137 aa3.87□□□□□ -1.79
SPB4YFL002C RRI1Q12468 440 aa3.87□□□□□ -1.79
SPB4YFL002C SUP35P05453 685 aaKnown RBP3.86□□□□□ -1.79
SPB4YFL002C CDC21P06785 304 aa3.86□□□□□ -1.79
SPB4YFL002C RNR2P09938 399 aaKnown RBP3.86□□□□□ -1.79
SPB4YFL002C GAL3P13045 520 aa3.86□□□□□ -1.79
SPB4YFL002C RPI1P23250 407 aaKnown RBP3.86□□□□□ -1.79
SPB4YFL002C PPZ1P26570 692 aa3.86□□□□□ -1.79
SPB4YFL002C RTT107P38850 1070 aa3.86□□□□□ -1.79
SPB4YFL002C RTT102P53330 157 aa3.86□□□□□ -1.79
SPB4YFL002C YLR297WQ05899 129 aa3.86□□□□□ -1.79
SPB4YFL002C STE23Q06010 1027 aa3.86□□□□□ -1.79
SPB4YFL002C KAP95Q06142 861 aaKnown RBP3.86□□□□□ -1.79
SPB4YFL002C DIC1Q06143 298 aa3.86□□□□□ -1.79
SPB4YFL002C YCR007CP25354 239 aa3.86□□□□□ -1.79
SPB4YFL002C BUB3P26449 341 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms