RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	YKR051W	P36142	418 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	APM3	P38153	483 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	ECM13	P38195	257 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	MUM2	P38236	366 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	SAF1	P38352	637 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	PHO12	P38693	467 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	DHH1	P39517	506 aa	Known RBP	4.61	□□□□□ -1.67
RVB1	YDR190C	RBG1	P39729	369 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	MTW1	P39731	289 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YJL070C	P40361	888 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	UTP18	P40362	594 aa	Predicted RBP	4.61	□□□□□ -1.67
RVB1	YDR190C	RIC1	P40395	1056 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YIR016W	P40572	265 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	GTS1	P40956	396 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	OYE3	P41816	400 aa	Predicted RBP	4.61	□□□□□ -1.67
RVB1	YDR190C	GZF3	P42944	551 aa	Known RBP	4.61	□□□□□ -1.67
RVB1	YDR190C	DUG1	P43616	481 aa	Known RBP	4.61	□□□□□ -1.67
RVB1	YDR190C	HXT16	P47185	567 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	COG1	P53079	417 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	VPS62	P53285	467 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YNL143C	P53908	130 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YNL095C	P53932	642 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	VAC7	P53950	1165 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	SED5	Q01590	340 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
RVB1	YDR190C	SPR6	Q01684	191 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YMR010W	Q03687	405 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YDR239C	Q03780	787 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	PEX12	Q04370	399 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YDR124W	Q04608	324 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	GSF2	Q04697	403 aa	Known RBP	4.61	□□□□□ -1.67
RVB1	YDR190C	GGA1	Q06336	557 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	GPI11	Q06636	219 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	VAM6	Q07468	1049 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
RVB1	YDR190C	MSH5	Q12175	901 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	YDR215C	Q12240	137 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	IES3	Q12345	250 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	AHA1	Q12449	350 aa	Known RBP	4.61	□□□□□ -1.67
RVB1	YDR190C	YLR422W	Q06409	1932 aa		4.61	□□□□□ -1.67
RVB1	YDR190C	CDC21	P06785	304 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	SPT3	P06844	337 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	ATP1	P07251	545 aa	Known RBP	4.6	□□□□□ -1.67
RVB1	YDR190C	HMG1	P12683	1054 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	ARF2	P19146	181 aa	Known RBP	4.6	□□□□□ -1.67
RVB1	YDR190C	CMK2	P22517	447 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	ERG6	P25087	383 aa	Known RBP	4.6	□□□□□ -1.67
RVB1	YDR190C	BRF1	P29056	596 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	MF(ALPHA)2	P32435	120 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	COX13	P32799	129 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	RIB7	P33312	244 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	CAF4	P36130	643 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	YBR241C	P38142	488 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	LDB7	P38210	180 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	YHR045W	P38775	560 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	SSZ1	P38788	538 aa	Known RBP	4.6	□□□□□ -1.67
RVB1	YDR190C	RGI1	P40043	161 aa	Predicted RBP	4.6	□□□□□ -1.67
RVB1	YDR190C	MEP2	P41948	499 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	SHE4	P51534	789 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	AIM14	P53109	570 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	TOF2	Q02208	771 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	SSL1	Q04673	461 aa	Predicted RBP	4.6	□□□□□ -1.67
RVB1	YDR190C	MCP2	Q06567	569 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	RAD34	Q06665	692 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	YLR413W	Q06689	675 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	HBT1	Q07653	1046 aa	Known RBP	4.6	□□□□□ -1.67
RVB1	YDR190C	XYL2	Q07993	356 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	UAF30	Q08747	228 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	YPQ1	Q12010	308 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	NSI1	Q12457	570 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	PEX11	Q12462	236 aa		4.6	□□□□□ -1.67
RVB1	YDR190C	PHO5	P00635	467 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	FBA1	P14540	359 aa	Known RBP	4.59	□□□□□ -1.67
RVB1	YDR190C	CBS2	P14905	389 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	CLB2	P24869	491 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	PEX3	P28795	441 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	COQ2	P32378	372 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	ARP2	P32381	391 aa	Known RBP	4.59	□□□□□ -1.67
RVB1	YDR190C	RPS1A	P33442	255 aa	Known RBP	4.59	□□□□□ -1.67
RVB1	YDR190C	UTP11	P34247	250 aa	Predicted RBP	4.59	□□□□□ -1.67
RVB1	YDR190C	SPC34	P36131	295 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	MRPL40	P36534	297 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	TAT1	P38085	619 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	ERV46	P39727	415 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	DOT6	P40059	670 aa	Known RBP	4.59	□□□□□ -1.67
RVB1	YDR190C	FAF1	P40546	346 aa	Predicted RBP	4.59	□□□□□ -1.67
RVB1	YDR190C	MSS2	P40990	351 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	GCD10	P41814	478 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	YFL052W	P43551	465 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	GTO1	P48239	356 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	RBL2	P48606	106 aa	Known RBP	4.59	□□□□□ -1.67
RVB1	YDR190C	FRE4	P53746	719 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	DSL1	P53847	754 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	ASI1	P54074	624 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	MET31	Q03081	177 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	MCM21	Q06675	368 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	SWA2	Q06677	668 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	PSR1	Q07800	427 aa		4.59	□□□□□ -1.67
RVB1	YDR190C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RVB1	YDR190C	NDD1	Q08887	554 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 124.5 ms