RNA–Protein interactions for RNA: YDR041W

RSM10, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM10, Length 612 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM10	YDR041W	BTS1	Q12051	335 aa		4.97	□□□□□ -1.61
RSM10	YDR041W	TGS1	Q12052	315 aa		4.97	□□□□□ -1.61
RSM10	YDR041W	MRH1	Q12117	320 aa	Predicted RBP	4.97	□□□□□ -1.61
RSM10	YDR041W	ATG9	Q12142	997 aa		4.97	□□□□□ -1.61
RSM10	YDR041W	RAV1	P47104	1357 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	RVS161	P25343	265 aa	Known RBP	4.96	□□□□□ -1.62
RSM10	YDR041W	MSS1	P32559	526 aa	Predicted RBP	4.96	□□□□□ -1.62
RSM10	YDR041W	RPL32	P38061	130 aa	Known RBP	4.96	□□□□□ -1.62
RSM10	YDR041W	CTP1	P38152	299 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	SPC97	P38863	823 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	YHR210C	P38893	341 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	PLB1	P39105	664 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	LAS21	P40367	830 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	CHA4	P43634	648 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	TOS3	P43637	560 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	ATG27	P46989	271 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	ESBP6	P53918	673 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	YDL242W	Q07746	117 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	TEN1	Q07921	160 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	PEX27	Q08580	376 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	GLE1	Q12315	538 aa		4.96	□□□□□ -1.62
RSM10	YDR041W	PMA1	P05030	918 aa	Known RBP	4.95	□□□□□ -1.62
RSM10	YDR041W	ABF1	P14164	731 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	DAL81	P21657	970 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	HXT2	P23585	541 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	CDC20	P26309	610 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	ATP11	P32453	318 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	DUG2	P38149	878 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	MAL32	P38158	584 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	ALP1	P38971	573 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	PCF11	P39081	626 aa	Predicted RBP	4.95	□□□□□ -1.62
RSM10	YDR041W	PAC11	P40960	533 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	RIM8	P53179	542 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	DRN1	P53255	507 aa	Known RBP	4.95	□□□□□ -1.62
RSM10	YDR041W	YGR117C	P53270	476 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	MRPS35	P53292	345 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	MAL12	P53341	584 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	APM1	Q00776	475 aa	Predicted RBP	4.95	□□□□□ -1.62
RSM10	YDR041W	COQ9	Q05779	260 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	DIB1	Q06819	143 aa	Predicted RBP	4.95	□□□□□ -1.62
RSM10	YDR041W	POS5	Q06892	414 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	NSE1	Q07913	336 aa		4.95	□□□□□ -1.62
RSM10	YDR041W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
RSM10	YDR041W	SCEI	P03882	235 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	CHO2	P05374	869 aa	Known RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	RIP1	P08067	215 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	PCT1	P13259	424 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	RHB1	P25378	209 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	YUR1	P26725	428 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RSM10	YDR041W	SKG6	P32900	734 aa	Predicted RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	BUD2	P33314	1104 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	ECT1	P33412	323 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	SPT10	P35208	640 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	ELF1	P36053	145 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	SPP381	P38282	291 aa	Predicted RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	TSC10	P38342	320 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	DBP8	P38719	431 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	YHR182W	P38870	785 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	STN1	P38960	494 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	CDC40	P40968	455 aa	Predicted RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	SPG5	P42933	373 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	YFR020W	P43600	232 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	ERG26	P53199	349 aa	Known RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	VPS62	P53285	467 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	RET3	P53600	189 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	AAT1	Q01802	451 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	SLU7	Q02775	382 aa	Known RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	STD1	Q02794	444 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	SYO1	Q07395	620 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	ACK1	Q07622	623 aa	Predicted RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	GET4	Q12125	312 aa		4.94	□□□□□ -1.62
RSM10	YDR041W	LSP1	Q12230	341 aa	Known RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	BRR1	Q99177	341 aa	Predicted RBP	4.94	□□□□□ -1.62
RSM10	YDR041W	AAC1	P04710	309 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	COR1	P07256	457 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	RAP1	P11938	827 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	YPK1	P12688	680 aa	Known RBP	4.93	□□□□□ -1.62
RSM10	YDR041W	YPK2	P18961	677 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	SGV1	P23293	657 aa	Known RBP	4.93	□□□□□ -1.62
RSM10	YDR041W	DAL2	P25335	343 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	ELO2	P25358	347 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	FUB1	P25659	250 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	PRR1	P28708	518 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	ZIP1	P31111	875 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	SIN4	P32259	974 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	YPS1	P32329	569 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	FRE1	P32791	686 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	OCT1	P35999	772 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	RRN10	P38204	145 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	PCA1	P38360	1216 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	PRP39	P39682	629 aa	Known RBP	4.93	□□□□□ -1.62
RSM10	YDR041W	UBP5	P39944	805 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	OPT1	P40897	799 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	BUD17	P53727	317 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	RPS15	Q01855	142 aa	Known RBP	4.93	□□□□□ -1.62
RSM10	YDR041W	UBP16	Q02863	499 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	TAF12	Q03761	539 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	URH1	Q04179	340 aa		4.93	□□□□□ -1.62
RSM10	YDR041W	BSC6	Q08280	497 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms