RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W HIR2P32480 875 aa2.76□□□□□ -1.97
SHS1YDL225W ECM25P32525 599 aa2.76□□□□□ -1.97
SHS1YDL225W TFB1P32776 642 aa2.76□□□□□ -1.97
SHS1YDL225W YCR041WP37265 110 aa2.76□□□□□ -1.97
SHS1YDL225W IDP2P41939 412 aa2.76□□□□□ -1.97
SHS1YDL225W RRT5P43607 289 aa2.76□□□□□ -1.97
SHS1YDL225W YJR011CP47086 261 aaPredicted RBP2.76□□□□□ -1.97
SHS1YDL225W YIP1P53039 248 aa2.76□□□□□ -1.97
SHS1YDL225W ART5P53244 586 aaKnown RBP2.76□□□□□ -1.97
SHS1YDL225W RMT2Q03305 412 aa2.76□□□□□ -1.97
SHS1YDL225W YLR345WQ06137 509 aa2.76□□□□□ -1.97
SHS1YDL225W CPR1P14832 162 aaKnown RBP2.76□□□□□ -1.97
SHS1YDL225W CLB1P24868 471 aa2.76□□□□□ -1.97
SHS1YDL225W RNA14P25298 677 aaKnown RBP2.76□□□□□ -1.97
SHS1YDL225W RHB1P25378 209 aa2.76□□□□□ -1.97
SHS1YDL225W GEX1P25596 615 aa2.76□□□□□ -1.97
SHS1YDL225W KRE2P27809 442 aa2.76□□□□□ -1.97
SHS1YDL225W BEM1P29366 551 aa2.76□□□□□ -1.97
SHS1YDL225W CRM1P30822 1084 aaKnown RBP2.76□□□□□ -1.97
SHS1YDL225W PIM1P36775 1133 aa2.76□□□□□ -1.97
SHS1YDL225W YHR054CP38780 354 aa2.76□□□□□ -1.97
SHS1YDL225W ZIM17P42844 174 aa2.76□□□□□ -1.97
SHS1YDL225W CAK1P43568 368 aaPredicted RBP2.76□□□□□ -1.97
SHS1YDL225W ECM27P47144 725 aa2.76□□□□□ -1.97
SHS1YDL225W POP6P53218 158 aa2.76□□□□□ -1.97
SHS1YDL225W CAF40P53829 373 aa2.76□□□□□ -1.97
SHS1YDL225W SMC6Q12749 1114 aa2.76□□□□□ -1.97
SHS1YDL225W HIS4P00815 799 aaKnown RBP2.75□□□□□ -1.97
SHS1YDL225W HIP1P06775 603 aa2.75□□□□□ -1.97
SHS1YDL225W VMA8P32610 256 aaKnown RBP2.75□□□□□ -1.97
SHS1YDL225W MRP4P32902 394 aa2.75□□□□□ -1.97
SHS1YDL225W MSO1P53604 210 aaKnown RBP2.75□□□□□ -1.97
SHS1YDL225W YMR130WQ04223 302 aa2.75□□□□□ -1.97
SHS1YDL225W HNT3Q08702 217 aa2.75□□□□□ -1.97
SHS1YDL225W RKM1Q08961 583 aaPredicted RBP2.75□□□□□ -1.97
SHS1YDL225W ERP4Q12450 207 aa2.75□□□□□ -1.97
SHS1YDL225W CHS1P08004 1131 aa2.74□□□□□ -1.97
SHS1YDL225W SAM1P10659 382 aaKnown RBP2.74□□□□□ -1.97
SHS1YDL225W SAM2P19358 384 aaKnown RBP2.74□□□□□ -1.97
SHS1YDL225W URA4P20051 364 aa2.74□□□□□ -1.97
SHS1YDL225W CPR2P23285 205 aa2.74□□□□□ -1.97
SHS1YDL225W RGT1P32862 1170 aa2.74□□□□□ -1.97
SHS1YDL225W APE3P37302 537 aaKnown RBP2.74□□□□□ -1.97
SHS1YDL225W YBP1P38315 674 aa2.74□□□□□ -1.97
SHS1YDL225W YHR218WP38899 603 aa2.74□□□□□ -1.97
SHS1YDL225W TCB2P48231 1178 aa2.74□□□□□ -1.97
SHS1YDL225W FRE4P53746 719 aa2.74□□□□□ -1.97
SHS1YDL225W ACL4Q03771 387 aa2.74□□□□□ -1.97
SHS1YDL225W DIS3Q08162 1001 aaKnown RBP2.74□□□□□ -1.97
SHS1YDL225W MUM3Q08750 479 aa2.74□□□□□ -1.97
SHS1YDL225W YPL199CQ08954 240 aa2.74□□□□□ -1.97
SHS1YDL225W VPS54Q12071 889 aa2.74□□□□□ -1.97
SHS1YDL225W YPR022CQ12139 1133 aa2.74□□□□□ -1.97
SHS1YDL225W PMR1P13586 950 aa2.73□□□□□ -1.97
SHS1YDL225W BRF1P29056 596 aa2.73□□□□□ -1.97
SHS1YDL225W NAT2P37293 288 aa2.73□□□□□ -1.97
SHS1YDL225W MMS4P38257 691 aa2.73□□□□□ -1.97
SHS1YDL225W RRT2P38332 387 aa2.73□□□□□ -1.97
SHS1YDL225W PCA1P38360 1216 aa2.73□□□□□ -1.97
SHS1YDL225W TIF5P38431 405 aaKnown RBP2.73□□□□□ -1.97
SHS1YDL225W SRP72P38688 640 aaKnown RBP2.73□□□□□ -1.97
SHS1YDL225W MKT1P40850 830 aaKnown RBP2.73□□□□□ -1.97
SHS1YDL225W YJL132WP47014 750 aa2.73□□□□□ -1.97
SHS1YDL225W GOR1P53839 350 aa2.73□□□□□ -1.97
SHS1YDL225W HOT1Q03213 719 aa2.73□□□□□ -1.97
SHS1YDL225W AIM32Q04689 311 aa2.73□□□□□ -1.97
SHS1YDL225W YCL021W-AQ96VH3 125 aa2.73□□□□□ -1.97
SHS1YDL225W HOM3P10869 527 aa2.73□□□□□ -1.97
SHS1YDL225W CPR3P25719 182 aa2.73□□□□□ -1.97
SHS1YDL225W TIP1P27654 210 aaPredicted RBP2.73□□□□□ -1.97
SHS1YDL225W ITR1P30605 584 aa2.73□□□□□ -1.97
SHS1YDL225W PXA2P34230 853 aa2.73□□□□□ -1.97
SHS1YDL225W SOR1P35497 357 aaKnown RBP2.73□□□□□ -1.97
SHS1YDL225W SLM4P38247 162 aa2.73□□□□□ -1.97
SHS1YDL225W LYS1P38998 373 aaRIP-Chip data2.73□□□□□ -1.97not detected
SHS1YDL225W MST28P39552 234 aa2.73□□□□□ -1.97
SHS1YDL225W YFL067WP43537 175 aa2.73□□□□□ -1.97
SHS1YDL225W HMS2P47175 358 aa2.73□□□□□ -1.97
SHS1YDL225W YML6P51998 286 aa2.73□□□□□ -1.97
SHS1YDL225W RPT4P53549 437 aaKnown RBP2.73□□□□□ -1.97
SHS1YDL225W IMP4P53941 290 aaKnown RBP2.73□□□□□ -1.97
SHS1YDL225W MRP51Q02950 344 aa2.73□□□□□ -1.97
SHS1YDL225W MMR1Q06324 491 aa2.73□□□□□ -1.97
SHS1YDL225W SOR2Q07786 357 aa2.73□□□□□ -1.97
SHS1YDL225W REX4Q08237 289 aa2.73□□□□□ -1.97
SHS1YDL225W TIM18Q08749 192 aa2.73□□□□□ -1.97
SHS1YDL225W THP3Q12049 470 aaKnown RBP2.73□□□□□ -1.97
SHS1YDL225W TY1B-AO13527 1196 aaKnown RBP2.72□□□□□ -1.97
SHS1YDL225W SCEIP03882 235 aa2.72□□□□□ -1.97
SHS1YDL225W SPO7P18410 259 aa2.72□□□□□ -1.97
SHS1YDL225W SMY1P32364 656 aaKnown RBP2.72□□□□□ -1.97
SHS1YDL225W LAM5P43560 674 aa2.72□□□□□ -1.97
SHS1YDL225W YNR048WP53740 393 aa2.72□□□□□ -1.97
SHS1YDL225W BOR1P53838 576 aa2.72□□□□□ -1.97
SHS1YDL225W PKH2Q12236 1081 aaKnown RBP2.72□□□□□ -1.97
SHS1YDL225W ORT1Q12375 292 aa2.72□□□□□ -1.97
SHS1YDL225W ARG4P04076 463 aaPredicted RBP2.71□□□□□ -1.98
SHS1YDL225W HEM15P16622 393 aa2.71□□□□□ -1.98
SHS1YDL225W MDH1P17505 334 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SHS1YDL225W CLN1P20437 546 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms