RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C DTD1Q07648 150 aaKnown RBP5.05□□□□□ -1.6
ATG20YDL113C NTO1Q12311 748 aa5.05□□□□□ -1.6
ATG20YDL113C YOR012WQ12351 137 aa5.05□□□□□ -1.6
ATG20YDL113C UBR1P19812 1950 aa5.05□□□□□ -1.6
ATG20YDL113C ATR1P13090 542 aa5.05□□□□□ -1.6
ATG20YDL113C GBP2P25555 427 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
ATG20YDL113C AAR2P32357 355 aaPredicted RBP5.05□□□□□ -1.6
ATG20YDL113C GMH1P36125 273 aa5.05□□□□□ -1.6
ATG20YDL113C SKG1P36169 355 aa5.05□□□□□ -1.6
ATG20YDL113C TAE1P38340 232 aa5.05□□□□□ -1.6
ATG20YDL113C ATG7P38862 630 aa5.05□□□□□ -1.6
ATG20YDL113C YER034WP40022 185 aaKnown RBP5.05□□□□□ -1.6
ATG20YDL113C LAS21P40367 830 aa5.05□□□□□ -1.6
ATG20YDL113C AZF1P41696 914 aa5.05□□□□□ -1.6
ATG20YDL113C ELP2P42935 788 aa5.05□□□□□ -1.6
ATG20YDL113C MTR3P48240 250 aaPredicted RBP5.05□□□□□ -1.6
ATG20YDL113C VMA10P48836 114 aaKnown RBP5.05□□□□□ -1.6
ATG20YDL113C PPT1P53043 513 aa5.05□□□□□ -1.6
ATG20YDL113C RMR1P53060 241 aa5.05□□□□□ -1.6
ATG20YDL113C FLC3P53121 802 aa5.05□□□□□ -1.6
ATG20YDL113C YGL108CP53139 140 aa5.05□□□□□ -1.6
ATG20YDL113C SFB2P53953 876 aa5.05□□□□□ -1.6
ATG20YDL113C SDH1Q00711 640 aa5.05□□□□□ -1.6
ATG20YDL113C EFR3Q03653 782 aaKnown RBP5.05□□□□□ -1.6
ATG20YDL113C GGA1Q06336 557 aa5.05□□□□□ -1.6
ATG20YDL113C YLR413WQ06689 675 aa5.05□□□□□ -1.6
ATG20YDL113C ATG10Q07879 167 aa5.05□□□□□ -1.6
ATG20YDL113C TRM8Q12009 286 aa5.05□□□□□ -1.6
ATG20YDL113C RPS9AO13516 197 aaKnown RBP5.04□□□□□ -1.6
ATG20YDL113C ERG6P25087 383 aaKnown RBP5.04□□□□□ -1.6
ATG20YDL113C PEX3P28795 441 aa5.04□□□□□ -1.6
ATG20YDL113C CDC5P32562 705 aa5.04□□□□□ -1.6
ATG20YDL113C AFR1P33304 620 aa5.04□□□□□ -1.6
ATG20YDL113C YKL097CP34245 136 aa5.04□□□□□ -1.6
ATG20YDL113C DEF1P35732 738 aaKnown RBP5.04□□□□□ -1.6
ATG20YDL113C COS111P38308 924 aa5.04□□□□□ -1.6
ATG20YDL113C NEM1P38757 446 aa5.04□□□□□ -1.6
ATG20YDL113C YHR218WP38899 603 aa5.04□□□□□ -1.6
ATG20YDL113C YEL073CP39974 107 aa5.04□□□□□ -1.6
ATG20YDL113C MEP1P40260 492 aa5.04□□□□□ -1.6
ATG20YDL113C AYR1P40471 297 aa5.04□□□□□ -1.6
ATG20YDL113C YJR030CP47101 745 aa5.04□□□□□ -1.6
ATG20YDL113C NAS6P50086 228 aa5.04□□□□□ -1.6
ATG20YDL113C YGR015CP53208 328 aa5.04□□□□□ -1.6
ATG20YDL113C ARE2P53629 642 aaKnown RBP5.04□□□□□ -1.6
ATG20YDL113C AQR1P53943 586 aa5.04□□□□□ -1.6
ATG20YDL113C PEX12Q04370 399 aa5.04□□□□□ -1.6
ATG20YDL113C GPI11Q06636 219 aa5.04□□□□□ -1.6
ATG20YDL113C SWA2Q06677 668 aa5.04□□□□□ -1.6
ATG20YDL113C LOT6Q07923 191 aa5.04□□□□□ -1.6
ATG20YDL113C YTM1Q12024 460 aaPredicted RBP5.04□□□□□ -1.6
ATG20YDL113C RPN5Q12250 445 aaKnown RBP5.04□□□□□ -1.6
ATG20YDL113C GTT2Q12390 233 aa5.04□□□□□ -1.6
ATG20YDL113C RPS14AP06367 137 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C RHO1P06780 209 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C RSR1P13856 272 aa5.03□□□□□ -1.6
ATG20YDL113C PUP3P25451 205 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C RFA2P26754 273 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C IDH2P28241 369 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C UBC8P28263 218 aa5.03□□□□□ -1.6
ATG20YDL113C PMT1P33775 817 aa5.03□□□□□ -1.6
ATG20YDL113C MDJ1P35191 511 aa5.03□□□□□ -1.6
ATG20YDL113C RMA1P36001 430 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C CBP4P37267 147 aa5.03□□□□□ -1.6
ATG20YDL113C AHP1P38013 176 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C SIC1P38634 284 aa5.03□□□□□ -1.6
ATG20YDL113C APE4P38821 490 aa5.03□□□□□ -1.6
ATG20YDL113C RPS14BP39516 138 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C YRB2P40517 327 aa5.03□□□□□ -1.6
ATG20YDL113C HIS6P40545 261 aa5.03□□□□□ -1.6
ATG20YDL113C PFA3P42836 336 aa5.03□□□□□ -1.6
ATG20YDL113C LSB6P42951 607 aa5.03□□□□□ -1.6
ATG20YDL113C IMP4P53941 290 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C IDP3P53982 420 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C MPS1P54199 764 aa5.03□□□□□ -1.6
ATG20YDL113C ECM11Q04110 302 aa5.03□□□□□ -1.6
ATG20YDL113C MLH3Q12083 715 aa5.03□□□□□ -1.6
ATG20YDL113C STE3P06783 470 aa5.03□□□□□ -1.6
ATG20YDL113C COR1P07256 457 aa5.03□□□□□ -1.6
ATG20YDL113C HTS1P07263 546 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C RPS4AP0CX35 261 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C RPS4BP0CX36 261 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C MET8P15807 274 aa5.03□□□□□ -1.6
ATG20YDL113C MSB1P21339 1137 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C SAC1P32368 623 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C ARP2P32381 391 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C HXT4P32467 576 aa5.03□□□□□ -1.6
ATG20YDL113C SEC17P32602 292 aa5.03□□□□□ -1.6
ATG20YDL113C RPF2P36160 344 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C IML3P38265 245 aa5.03□□□□□ -1.6
ATG20YDL113C UBA4P38820 440 aa5.03□□□□□ -1.6
ATG20YDL113C HXT6P39003 570 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C HXT7P39004 570 aa5.03□□□□□ -1.6
ATG20YDL113C NDE1P40215 560 aa5.03□□□□□ -1.6
ATG20YDL113C CAB2P40506 365 aa5.03□□□□□ -1.6
ATG20YDL113C VHR1P40522 640 aa5.03□□□□□ -1.6
ATG20YDL113C GZF3P42944 551 aaKnown RBP5.03□□□□□ -1.6
ATG20YDL113C GYP8P43570 497 aa5.03□□□□□ -1.6
ATG20YDL113C GCV1P48015 400 aa5.03□□□□□ -1.6
ATG20YDL113C SGF73P53165 657 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms