RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB6, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB6	YBR253W	MATALPHA2	P0CY08	210 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	HMLALPHA2	P0CY09	210 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	PMR1	P13586	950 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	PRP2	P20095	876 aa	Predicted RBP	4.64	□□□□□ -1.67
SRB6	YBR253W	STE11	P23561	717 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	GEX1	P25596	615 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	PTC6	P25646	442 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	MRPL9	P31334	269 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	RIM1	P32445	135 aa	Known RBP	4.64	□□□□□ -1.67
SRB6	YBR253W	HSM3	P38348	480 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	LIN1	P38852	340 aa	Predicted RBP	4.64	□□□□□ -1.67
SRB6	YBR253W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SRB6	YBR253W	MNN9	P39107	395 aa	Known RBP	4.64	□□□□□ -1.67
SRB6	YBR253W	MBB1	P39534	108 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	RNT1	Q02555	471 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	YMR178W	Q03219	274 aa	Known RBP	4.64	□□□□□ -1.67
SRB6	YBR253W	CUR1	Q06469	252 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	NDL1	Q06568	189 aa		4.64	□□□□□ -1.67
SRB6	YBR253W	LEU4	P06208	619 aa	Known RBP	4.63	□□□□□ -1.67
SRB6	YBR253W	RHO2	P06781	192 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	RIP1	P08067	215 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	RAP1	P11938	827 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	KRE2	P27809	442 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	LIP5	P32875	414 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	GMH1	P36125	273 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	PPS1	P38148	807 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	RFT1	P38206	574 aa	Predicted RBP	4.63	□□□□□ -1.67
SRB6	YBR253W	MED8	P38304	223 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	VHC1	P38329	1120 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	PCA1	P38360	1216 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	MIT1	P40002	666 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	ARG2	P40360	574 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	NDC80	P40460	691 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	CIN1	P40987	1014 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	YFL015C	P43578	164 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	ROG1	P53118	685 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	YGR126W	P53274	230 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	YPR003C	P53394	754 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	MRS2	Q01926	470 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	YMR102C	Q03177	834 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	PFA5	Q03289	374 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	GFD1	Q04839	188 aa	Known RBP	4.63	□□□□□ -1.67
SRB6	YBR253W	YDL057W	Q07379	328 aa		4.63	□□□□□ -1.67
SRB6	YBR253W	SSK22	P25390	1331 aa	Predicted RBP	4.63	□□□□□ -1.67
SRB6	YBR253W	COX3	P00420	269 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	CDC37	P06101	506 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	PEP4	P07267	405 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	RNA1	P11745	407 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	SAG1	P20840	650 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	MTR2	P34232	184 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	TSA1	P34760	196 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	YKT6	P36015	200 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	CBR1	P38626	284 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	RTT107	P38850	1070 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	MNL1	P38888	796 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	YHR210C	P38893	341 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	DSN1	P40568	576 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	LAM5	P43560	674 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	MNN10	P50108	393 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	YTP1	P53584	459 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	SMX3	P54999	86 aa	Predicted RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	SMA1	Q02651	245 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	YDR541C	Q03049	344 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	CWC21	Q03375	135 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	EKI1	Q03764	534 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	SMA2	Q04658	369 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	MDM30	Q05930	598 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	RAD34	Q06665	692 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	NTO1	Q12311	748 aa		4.62	□□□□□ -1.67
SRB6	YBR253W	RRP5	Q05022	1729 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.62	□□□□□ -1.67
SRB6	YBR253W	PPR1	P07272	904 aa	Predicted RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	ALG1	P16661	449 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	SGV1	P23293	657 aa	Known RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	RHB1	P25378	209 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	YJU2	P28320	278 aa	Predicted RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	PMI40	P29952	429 aa	Known RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	SIN4	P32259	974 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	TOD6	P34219	525 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	COY1	P34237	679 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	PTK1	P36002	662 aa	Predicted RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	YBR139W	P38109	508 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	GPI16	P38875	610 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	YMR147W	P40218	223 aa	Known RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	CTK3	P46963	296 aa	Predicted RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	ASN2	P49090	572 aa	Known RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	RIM8	P53179	542 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	ADE13	Q05911	482 aa	Known RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	STE23	Q06010	1027 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	ARV1	Q06541	321 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	MCP2	Q06567	569 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	YLR040C	Q07988	224 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	THP1	Q08231	455 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	RKM1	Q08961	583 aa	Predicted RBP	4.61	□□□□□ -1.67
SRB6	YBR253W	ULA1	Q12059	462 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	NCE102	Q12207	173 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
SRB6	YBR253W	YOR012W	Q12351	137 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	RRD2	Q12461	358 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	SRN2	Q99176	213 aa		4.61	□□□□□ -1.67
SRB6	YBR253W	YRF1-2	P40105	1681 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms