RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB6, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB6YBR253W DRS1P32892 752 aaKnown RBP11.46□□□□□ -0.57
SRB6YBR253W MTC1P47018 478 aaKnown RBP10.48□□□□□ -0.73
SRB6YBR253W BFR2Q06631 534 aaKnown RBP10.32□□□□□ -0.76
SRB6YBR253W TFA1P36100 482 aa10.31□□□□□ -0.76
SRB6YBR253W RQC2Q12532 1038 aaKnown RBP9.63□□□□□ -0.87
SRB6YBR253W AVT3P36062 692 aa9.56□□□□□ -0.88
SRB6YBR253W DIP2Q12220 943 aaPredicted RBP9.42□□□□□ -0.9
SRB6YBR253W TAF7Q05021 590 aa9.03□□□□□ -0.96
SRB6YBR253W DMA1P38823 416 aa8.86□□□□□ -0.99
SRB6YBR253W RSE1Q04693 1361 aaKnown RBP8.64□□□□□ -1.03
SRB6YBR253W LEO1P38439 464 aa8.49□□□□□ -1.05
SRB6YBR253W PTP3P40048 928 aa8.46□□□□□ -1.06
SRB6YBR253W RPL17AP05740 184 aaKnown RBP8.29□□□□□ -1.08
SRB6YBR253W RPL17BP46990 184 aaKnown RBP8.29□□□□□ -1.08
SRB6YBR253W ISW2Q08773 1120 aa8.29□□□□□ -1.08
SRB6YBR253W RPG1P38249 964 aaKnown RBP8.18□□□□□ -1.1
SRB6YBR253W SSP1P38871 571 aa8.16□□□□□ -1.1
SRB6YBR253W LEU3P08638 886 aa8.14□□□□□ -1.11
SRB6YBR253W RIM101P33400 625 aa8.11□□□□□ -1.11
SRB6YBR253W REB1P21538 810 aa8.08□□□□□ -1.12
SRB6YBR253W SPT21P35209 758 aa8.06□□□□□ -1.12
SRB6YBR253W SAS10Q12136 610 aaPredicted RBP8.06□□□□□ -1.12
SRB6YBR253W YAH1Q12184 172 aaKnown RBP7.94□□□□□ -1.14
SRB6YBR253W OXP1P28273 1286 aa7.92□□□□□ -1.14
SRB6YBR253W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
SRB6YBR253W DMA2P53924 522 aa7.9□□□□□ -1.14
SRB6YBR253W PRI1P10363 409 aa7.89□□□□□ -1.15
SRB6YBR253W YLR271WQ06152 274 aa7.85□□□□□ -1.15
SRB6YBR253W RPN1P38764 993 aaKnown RBP7.82□□□□□ -1.16
SRB6YBR253W ABP1P15891 592 aaKnown RBP7.78□□□□□ -1.16
SRB6YBR253W YIL055CP40523 627 aaKnown RBP7.76□□□□□ -1.17
SRB6YBR253W MGA2P40578 1113 aa7.76□□□□□ -1.17
SRB6YBR253W CST9Q06032 482 aa7.69□□□□□ -1.18
SRB6YBR253W RLF2Q12495 606 aa7.69□□□□□ -1.18
SRB6YBR253W RSM7P47150 247 aa7.65□□□□□ -1.18
SRB6YBR253W CKB1P43639 278 aa7.62□□□□□ -1.19
SRB6YBR253W AAD16Q02895 342 aa7.62□□□□□ -1.19
SRB6YBR253W SPB4P25808 606 aaPredicted RBP7.61□□□□□ -1.19
SRB6YBR253W YKR023WP36119 530 aaKnown RBP7.59□□□□□ -1.19
SRB6YBR253W TSR3Q12094 313 aaKnown RBP7.58□□□□□ -1.2
SRB6YBR253W FAP1P53971 965 aa7.56□□□□□ -1.2
SRB6YBR253W VPS70P47161 811 aa7.54□□□□□ -1.2
SRB6YBR253W PSD2P53037 1138 aaKnown RBP7.54□□□□□ -1.2
SRB6YBR253W SET1P38827 1080 aaKnown RBP7.53□□□□□ -1.2
SRB6YBR253W YPR148CQ06523 435 aa7.53□□□□□ -1.2
SRB6YBR253W RAM2P29703 316 aa7.51□□□□□ -1.21
SRB6YBR253W AI2P03876 854 aa7.46□□□□□ -1.22
SRB6YBR253W HOP09932 586 aa7.45□□□□□ -1.22
SRB6YBR253W KIN1P13185 1064 aa7.45□□□□□ -1.22
SRB6YBR253W IFH1P39520 1085 aa7.45□□□□□ -1.22
SRB6YBR253W DSF2P38213 736 aa7.42□□□□□ -1.22
SRB6YBR253W TFC8Q12308 588 aa7.42□□□□□ -1.22
SRB6YBR253W DCD1P06773 312 aa7.39□□□□□ -1.23
SRB6YBR253W YNR021WP53723 404 aaKnown RBP7.39□□□□□ -1.23
SRB6YBR253W PBS2P08018 668 aa7.38□□□□□ -1.23
SRB6YBR253W RCR1P38212 213 aa7.36□□□□□ -1.23
SRB6YBR253W GLC3P32775 704 aa7.35□□□□□ -1.23
SRB6YBR253W HGH1P48362 394 aaKnown RBP7.34□□□□□ -1.23
SRB6YBR253W BBC1P47068 1157 aa7.32□□□□□ -1.24
SRB6YBR253W AIM7Q12156 149 aa7.31□□□□□ -1.24
SRB6YBR253W MRM1P25270 412 aa7.3□□□□□ -1.24
SRB6YBR253W YML020WQ03722 664 aa7.3□□□□□ -1.24
SRB6YBR253W IES2P40154 320 aa7.28□□□□□ -1.24
SRB6YBR253W MAK11P20484 414 aaKnown RBP7.27□□□□□ -1.25
SRB6YBR253W GUA1P38625 525 aaKnown RBP7.27□□□□□ -1.25
SRB6YBR253W MAM3Q12296 706 aa7.27□□□□□ -1.25
SRB6YBR253W AIM44Q99299 758 aa7.26□□□□□ -1.25
SRB6YBR253W BCH2P36122 765 aa7.24□□□□□ -1.25
SRB6YBR253W DIT2P21595 489 aa7.23□□□□□ -1.25
SRB6YBR253W NOP8Q08287 484 aaPredicted RBP7.23□□□□□ -1.25
SRB6YBR253W MRPL32P25348 183 aa7.22□□□□□ -1.25
SRB6YBR253W CDC27P38042 758 aa7.22□□□□□ -1.25
SRB6YBR253W RTG3P38165 486 aa7.22□□□□□ -1.25
SRB6YBR253W NUP42P49686 430 aaKnown RBP7.22□□□□□ -1.25
SRB6YBR253W EPS1P40557 701 aa7.2□□□□□ -1.26
SRB6YBR253W ORC1P54784 914 aaPredicted RBP7.2□□□□□ -1.26
SRB6YBR253W MAK21Q12176 1025 aaKnown RBP7.19□□□□□ -1.26
SRB6YBR253W SSA1P10591 642 aaKnown RBP7.18□□□□□ -1.26
SRB6YBR253W COQ8P27697 501 aa7.18□□□□□ -1.26
SRB6YBR253W REF2P42073 533 aaPredicted RBP7.18□□□□□ -1.26
SRB6YBR253W GEF1P37020 779 aa7.17□□□□□ -1.26
SRB6YBR253W SLX8P40072 274 aa7.17□□□□□ -1.26
SRB6YBR253W HPC2Q01448 625 aa7.17□□□□□ -1.26
SRB6YBR253W TFB3Q03290 321 aa7.16□□□□□ -1.26
SRB6YBR253W ATF2P53296 535 aa7.14□□□□□ -1.27
SRB6YBR253W SUB2Q07478 446 aaKnown RBP7.14□□□□□ -1.27
SRB6YBR253W NAP1P25293 417 aaKnown RBP7.12□□□□□ -1.27
SRB6YBR253W BDF1P35817 686 aa7.11□□□□□ -1.27
SRB6YBR253W VPS29P38759 282 aa7.09□□□□□ -1.27
SRB6YBR253W PKC1P24583 1151 aa7.08□□□□□ -1.28
SRB6YBR253W BRL1P38770 471 aa7.08□□□□□ -1.28
SRB6YBR253W IOC4Q04213 475 aa7.08□□□□□ -1.28
SRB6YBR253W EDS1P38073 919 aa7.07□□□□□ -1.28
SRB6YBR253W NOP53Q12080 455 aaKnown RBP7.07□□□□□ -1.28
SRB6YBR253W COX6P00427 148 aa7.06□□□□□ -1.28
SRB6YBR253W MIF2P35201 549 aa7.06□□□□□ -1.28
SRB6YBR253W BIM1P40013 344 aa7.04□□□□□ -1.28
SRB6YBR253W PRY3P47033 881 aa7.04□□□□□ -1.28
SRB6YBR253W GLN1P32288 370 aaKnown RBP7.03□□□□□ -1.28
SRB6YBR253W ATG32P40458 529 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms