RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W MSS1P32559 526 aaPredicted RBP6.95□□□□□ -1.3
TOD6YBL054W SSO1P32867 290 aa6.95□□□□□ -1.3
TOD6YBL054W RPS1AP33442 255 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W ARP1P38696 384 aa6.95□□□□□ -1.3
TOD6YBL054W EFM1P38732 585 aa6.95□□□□□ -1.3
TOD6YBL054W NDE1P40215 560 aa6.95□□□□□ -1.3
TOD6YBL054W MPM1P40364 252 aa6.95□□□□□ -1.3
TOD6YBL054W YJL218WP40892 196 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W OPT1P40897 799 aa6.95□□□□□ -1.3
TOD6YBL054W GAB1P41733 394 aa6.95□□□□□ -1.3
TOD6YBL054W SKP2P42843 763 aa6.95□□□□□ -1.3
TOD6YBL054W MDV1P47025 714 aa6.95□□□□□ -1.3
TOD6YBL054W CDC14Q00684 551 aa6.95□□□□□ -1.3
TOD6YBL054W RPL6AQ02326 176 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W MRPS16Q02608 121 aa6.95□□□□□ -1.3
TOD6YBL054W YPL068CQ02749 293 aa6.95□□□□□ -1.3
TOD6YBL054W YMR321CQ04898 105 aa6.95□□□□□ -1.3
TOD6YBL054W MFB1Q04922 465 aa6.95□□□□□ -1.3
TOD6YBL054W YMR034CQ05131 434 aaPredicted RBP6.95□□□□□ -1.3
TOD6YBL054W PHO92Q06390 306 aa6.95□□□□□ -1.3
TOD6YBL054W SYC1Q08553 188 aaPredicted RBP6.95□□□□□ -1.3
TOD6YBL054W DDC1Q08949 612 aa6.95□□□□□ -1.3
TOD6YBL054W SNF8Q12483 233 aa6.95□□□□□ -1.3
TOD6YBL054W ADE4P04046 510 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W DST1P07273 309 aa6.95□□□□□ -1.3
TOD6YBL054W SAM35P14693 329 aa6.95□□□□□ -1.3
TOD6YBL054W AMD1P15274 810 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W YDJ1P25491 409 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W GAC1P28006 793 aa6.95□□□□□ -1.3
TOD6YBL054W STE5P32917 917 aa6.95□□□□□ -1.3
TOD6YBL054W YKR051WP36142 418 aa6.95□□□□□ -1.3
TOD6YBL054W TSL1P38427 1098 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W STP2P38704 541 aa6.95□□□□□ -1.3
TOD6YBL054W VPS29P38759 282 aa6.95□□□□□ -1.3
TOD6YBL054W RRP4P38792 359 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W DHH1P39517 506 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W AFG3P39925 761 aa6.95□□□□□ -1.3
TOD6YBL054W ELO3P40319 345 aa6.95□□□□□ -1.3
TOD6YBL054W LSM1P47017 172 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W ECM27P47144 725 aa6.95□□□□□ -1.3
TOD6YBL054W BRE5P53741 515 aaKnown RBP6.95□□□□□ -1.3
TOD6YBL054W CAF40P53829 373 aa6.95□□□□□ -1.3
TOD6YBL054W KIN4Q01919 800 aa6.95□□□□□ -1.3
TOD6YBL054W YDR249CQ03787 373 aa6.95□□□□□ -1.3
TOD6YBL054W GRX8Q05926 109 aa6.95□□□□□ -1.3
TOD6YBL054W ENV7Q12003 364 aa6.95□□□□□ -1.3
TOD6YBL054W APC2Q12440 853 aa6.95□□□□□ -1.3
TOD6YBL054W RTN2Q12443 393 aa6.95□□□□□ -1.3
TOD6YBL054W LDB19Q12502 818 aa6.95□□□□□ -1.3
TOD6YBL054W HIS1P00498 297 aaKnown RBP6.94□□□□□ -1.3
TOD6YBL054W RAD52P06778 471 aaKnown RBP6.94□□□□□ -1.3
TOD6YBL054W TAH1P25638 111 aaPredicted RBP6.94□□□□□ -1.3
TOD6YBL054W AAR2P32357 355 aaPredicted RBP6.94□□□□□ -1.3
TOD6YBL054W MAK5P38112 773 aaPredicted RBP6.94□□□□□ -1.3
TOD6YBL054W YBR053CP38235 358 aa6.94□□□□□ -1.3
TOD6YBL054W YHR033WP38690 423 aa6.94□□□□□ -1.3
TOD6YBL054W STB5P38699 743 aa6.94□□□□□ -1.3
TOD6YBL054W YAP1801P38856 637 aa6.94□□□□□ -1.3
TOD6YBL054W VRG4P40107 337 aa6.94□□□□□ -1.3
TOD6YBL054W PRE6P40303 254 aaKnown RBP6.94□□□□□ -1.3
TOD6YBL054W NTA1P40354 457 aa6.94□□□□□ -1.3
TOD6YBL054W MEP2P41948 499 aa6.94□□□□□ -1.3
TOD6YBL054W AAD14P42884 376 aa6.94□□□□□ -1.3
TOD6YBL054W CAK1P43568 368 aaPredicted RBP6.94□□□□□ -1.3
TOD6YBL054W MPS2P53159 387 aa6.94□□□□□ -1.3
TOD6YBL054W NUP116Q02630 1113 aa6.94□□□□□ -1.3
TOD6YBL054W AIM36Q03798 255 aa6.94□□□□□ -1.3
TOD6YBL054W YDR514CQ04408 483 aa6.94□□□□□ -1.3
TOD6YBL054W EMI2Q04409 500 aaKnown RBP6.94□□□□□ -1.3
TOD6YBL054W ASR1Q06834 288 aa6.94□□□□□ -1.3
TOD6YBL054W YOL131WQ08270 108 aa6.94□□□□□ -1.3
TOD6YBL054W APC5Q08683 685 aa6.94□□□□□ -1.3
TOD6YBL054W RRG7Q08774 242 aaPredicted RBP6.94□□□□□ -1.3
TOD6YBL054W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
TOD6YBL054W ICT1Q12385 394 aa6.94□□□□□ -1.3
TOD6YBL054W YDR461C-AQ2V2P7 80 aa6.94□□□□□ -1.3
TOD6YBL054W AFI1Q99222 893 aa6.94□□□□□ -1.3
TOD6YBL054W GAL2P13181 574 aa6.93□□□□□ -1.3
TOD6YBL054W GAP1P19145 602 aaPredicted RBP6.93□□□□□ -1.3
TOD6YBL054W YIH1P25637 258 aa6.93□□□□□ -1.3
TOD6YBL054W APT2P36973 181 aa6.93□□□□□ -1.3
TOD6YBL054W DOT6P40059 670 aaKnown RBP6.93□□□□□ -1.3
TOD6YBL054W YTA6P40328 754 aa6.93□□□□□ -1.3
TOD6YBL054W YFL066CP43538 392 aa6.93□□□□□ -1.3
TOD6YBL054W ATG18P43601 500 aa6.93□□□□□ -1.3
TOD6YBL054W ATH1P48016 1211 aa6.93□□□□□ -1.3
TOD6YBL054W UBC12P52491 188 aa6.93□□□□□ -1.3
TOD6YBL054W MPC1P53157 130 aaKnown RBP6.93□□□□□ -1.3
TOD6YBL054W FMP48P53233 369 aa6.93□□□□□ -1.3
TOD6YBL054W SHY1P53266 389 aa6.93□□□□□ -1.3
TOD6YBL054W LSM7P53905 115 aaKnown RBP6.93□□□□□ -1.3
TOD6YBL054W EFM6P53970 246 aa6.93□□□□□ -1.3
TOD6YBL054W NUP100Q02629 959 aa6.93□□□□□ -1.3
TOD6YBL054W NSE5Q03718 556 aa6.93□□□□□ -1.3
TOD6YBL054W TIF35Q04067 274 aaKnown RBP6.93□□□□□ -1.3
TOD6YBL054W YLR283WQ05867 314 aa6.93□□□□□ -1.3
TOD6YBL054W UPC2Q12151 913 aa6.93□□□□□ -1.3
TOD6YBL054W FLP1P03870 423 aa6.92□□□□□ -1.3
TOD6YBL054W GLN3P18494 730 aa6.92□□□□□ -1.3
TOD6YBL054W CNB1P25296 175 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms