RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	GIM4	P40005	111 aa	Known RBP	4.12	□□□□□ -1.75
SPN1	YPR133C	YFR020W	P43600	232 aa		4.12	□□□□□ -1.75
SPN1	YPR133C	BNA1	P47096	177 aa		4.12	□□□□□ -1.75
SPN1	YPR133C	MSE1	P48525	536 aa		4.12	□□□□□ -1.75
SPN1	YPR133C	UBC9	P50623	157 aa	Predicted RBP	4.12	□□□□□ -1.75
SPN1	YPR133C	PUS9	Q12069	462 aa		4.12	□□□□□ -1.75
SPN1	YPR133C	YOL107W	Q12239	342 aa		4.12	□□□□□ -1.75
SPN1	YPR133C	LAS17	Q12446	633 aa		4.12	□□□□□ -1.75
SPN1	YPR133C	RPS21B	Q3E754	87 aa	Known RBP	4.12	□□□□□ -1.75
SPN1	YPR133C	YPT1	P01123	206 aa	Known RBP	4.11	□□□□□ -1.75
SPN1	YPR133C	PMS1	P14242	873 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	YCL042W	P25572	119 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	MSP1	P28737	362 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	YBL055C	P34220	418 aa	Predicted RBP	4.11	□□□□□ -1.75
SPN1	YPR133C	MIA40	P36046	403 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	RRT2	P38332	387 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	RTT107	P38850	1070 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	CTF8	P38877	133 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	MSS4	P38994	779 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	YMR124W	P39523	943 aa	Known RBP	4.11	□□□□□ -1.75
SPN1	YPR133C	ALG8	P40351	577 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	JJJ1	P53863	590 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	TRM12	Q04235	462 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	HLR1	Q04429	423 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	BLS1	Q06071	122 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	GRS2	Q06817	618 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	HUA2	Q12134	243 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	LEU9	Q12166	604 aa	Known RBP	4.11	□□□□□ -1.75
SPN1	YPR133C	YDR018C	Q12185	396 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	GTT2	Q12390	233 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	LAG2	Q92325	660 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	TAD3	Q9URQ3	322 aa		4.11	□□□□□ -1.75
SPN1	YPR133C	GAL7	P08431	366 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	HOM3	P10869	527 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	PHO13	P19881	312 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	HRR25	P29295	494 aa	Known RBP	4.1	□□□□□ -1.75
SPN1	YPR133C	PET127	P32606	800 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	STB6	P36085	766 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	RPF2	P36160	344 aa	Known RBP	4.1	□□□□□ -1.75
SPN1	YPR133C	RKM3	P38222	552 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	SET5	P38890	526 aa	Known RBP	4.1	□□□□□ -1.75
SPN1	YPR133C	BEM4	P39011	633 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	DHH1	P39517	506 aa	Known RBP	4.1	□□□□□ -1.75
SPN1	YPR133C	SER3	P40054	469 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	SEC24	P40482	926 aa	Known RBP	4.1	□□□□□ -1.75
SPN1	YPR133C	RPC17	P47076	161 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	BRO1	P48582	844 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	RNR4	P49723	345 aa	Known RBP	4.1	□□□□□ -1.75
SPN1	YPR133C	FHN1	P53279	174 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	SSL2	Q00578	843 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	OSH6	Q02201	448 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	TRS31	Q03337	283 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	SPC19	Q03954	165 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	YET2	Q04210	160 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	GAD1	Q04792	585 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	MDM30	Q05930	598 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	VTA1	Q06263	330 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	TEN1	Q07921	160 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	RAX1	Q08760	435 aa		4.1	□□□□□ -1.75
SPN1	YPR133C	COX1	P00401	534 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	ERG11	P10614	530 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	AMD1	P15274	810 aa	Known RBP	4.09	□□□□□ -1.75
SPN1	YPR133C	RER1	P25560	188 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	BUB3	P26449	341 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	NDI1	P32340	513 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	MEI5	P32489	222 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	RPS0A	P32905	252 aa	Known RBP	4.09	□□□□□ -1.75
SPN1	YPR133C	SFC1	P33303	322 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	RRN3	P36070	627 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	FAT1	P38225	669 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	YBP1	P38315	674 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	YHR045W	P38775	560 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	RLP7	P40693	322 aa	Known RBP	4.09	□□□□□ -1.75
SPN1	YPR133C	PHB1	P40961	287 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	PFA3	P42836	336 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	BNA2	P47125	453 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	YML6	P51998	286 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	SGF73	P53165	657 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	YPR003C	P53394	754 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	MOT3	P54785	490 aa	Known RBP	4.09	□□□□□ -1.75
SPN1	YPR133C	SLU7	Q02775	382 aa	Known RBP	4.09	□□□□□ -1.75
SPN1	YPR133C	LRS4	Q04087	347 aa	Known RBP	4.09	□□□□□ -1.75
SPN1	YPR133C	OMS1	Q06668	471 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	IRC13	Q08630	104 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	ATG9	Q12142	997 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	LDB17	Q12342	491 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	YOR012W	Q12351	137 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SPN1	YPR133C	YLR111W	Q12528	110 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	YBR182C-A	Q8TGU6	64 aa		4.09	□□□□□ -1.75
SPN1	YPR133C	PNO1	Q99216	274 aa	Known RBP	4.09	□□□□□ -1.75
SPN1	YPR133C	CDC39	P25655	2108 aa	Known RBP	4.09	□□□□□ -1.76
SPN1	YPR133C	CDC26	P14724	124 aa		4.08	□□□□□ -1.76
SPN1	YPR133C	TYR1	P20049	452 aa		4.08	□□□□□ -1.76
SPN1	YPR133C	ATP12	P22135	325 aa		4.08	□□□□□ -1.76
SPN1	YPR133C	NAM9	P27929	486 aa		4.08	□□□□□ -1.76
SPN1	YPR133C	ATP11	P32453	318 aa		4.08	□□□□□ -1.76
SPN1	YPR133C	MGM101	P32787	269 aa	Known RBP	4.08	□□□□□ -1.76
SPN1	YPR133C	CAB3	P36076	571 aa		4.08	□□□□□ -1.76
SPN1	YPR133C	MAK5	P38112	773 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms