RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C PCP1P53259 346 aa1.44□□□□□ -2.18
NIP100YPL174C PNG1Q02890 363 aa1.44□□□□□ -2.18
NIP100YPL174C DFR1P07807 211 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
NIP100YPL174C RPL19AP0CX82 189 aaKnown RBP1.43□□□□□ -2.18
NIP100YPL174C RPL19BP0CX83 189 aaPredicted RBP1.43□□□□□ -2.18
NIP100YPL174C PRP2P20095 876 aaPredicted RBP1.43□□□□□ -2.18
NIP100YPL174C RPI1P23250 407 aaKnown RBP1.43□□□□□ -2.18
NIP100YPL174C MRX6P48564 524 aa1.43□□□□□ -2.18
NIP100YPL174C NCS2P53923 493 aaPredicted RBP1.43□□□□□ -2.18
NIP100YPL174C RRG7Q08774 242 aaPredicted RBP1.43□□□□□ -2.18
NIP100YPL174C YER078W-AQ3E7A2 54 aa1.43□□□□□ -2.18
NIP100YPL174C SUP35P05453 685 aaKnown RBP1.43□□□□□ -2.18
NIP100YPL174C CLN1P20437 546 aa1.43□□□□□ -2.18
NIP100YPL174C LSB5P25369 354 aa1.43□□□□□ -2.18
NIP100YPL174C RAD14P28519 371 aa1.43□□□□□ -2.18
NIP100YPL174C MFT1P33441 392 aaKnown RBP1.43□□□□□ -2.18
NIP100YPL174C STB6P36085 766 aa1.43□□□□□ -2.18
NIP100YPL174C VID27P40157 782 aa1.43□□□□□ -2.18
NIP100YPL174C VTC2P43585 828 aa1.43□□□□□ -2.18
NIP100YPL174C YIF1P53845 314 aaKnown RBP1.43□□□□□ -2.18
NIP100YPL174C FIN1Q03898 291 aa1.43□□□□□ -2.18
NIP100YPL174C PKH2Q12236 1081 aaKnown RBP1.43□□□□□ -2.18
NIP100YPL174C RKM5Q12367 367 aa1.43□□□□□ -2.18
NIP100YPL174C SUC2P00724 532 aa1.42□□□□□ -2.18
NIP100YPL174C CLN3P13365 580 aa1.42□□□□□ -2.18
NIP100YPL174C SPO7P18410 259 aa1.42□□□□□ -2.18
NIP100YPL174C SNT1P25357 1226 aa1.42□□□□□ -2.18
NIP100YPL174C OCA4P25366 362 aa1.42□□□□□ -2.18
NIP100YPL174C ATP11P32453 318 aa1.42□□□□□ -2.18
NIP100YPL174C MNP1P53163 194 aaPredicted RBP1.42□□□□□ -2.18
NIP100YPL174C SHY1P53266 389 aa1.42□□□□□ -2.18
NIP100YPL174C ALF1P53904 254 aa1.42□□□□□ -2.18
NIP100YPL174C SOV1Q04748 898 aa1.42□□□□□ -2.18
NIP100YPL174C RIM20Q12033 661 aa1.42□□□□□ -2.18
NIP100YPL174C SEM1O94742 89 aa1.42□□□□□ -2.18
NIP100YPL174C RHO2P06781 192 aa1.42□□□□□ -2.18
NIP100YPL174C SPS22P25380 463 aa1.42□□□□□ -2.18
NIP100YPL174C PIM1P36775 1133 aa1.42□□□□□ -2.18
NIP100YPL174C ARF3P40994 183 aaRIP-Chip data1.42□□□□□ -2.18 RIP-Chip
NIP100YPL174C YGR149WP48236 432 aa1.42□□□□□ -2.18
NIP100YPL174C YDR056CQ12025 205 aa1.42□□□□□ -2.18
NIP100YPL174C NMD4Q12129 218 aa1.42□□□□□ -2.18
NIP100YPL174C NCE102Q12207 173 aaRIP-Chip data1.42□□□□□ -2.18not detected
NIP100YPL174C YDL007C-AQ2V2Q0 85 aa1.42□□□□□ -2.18
NIP100YPL174C CHS1P08004 1131 aa1.41□□□□□ -2.18
NIP100YPL174C MNS1P32906 549 aa1.41□□□□□ -2.18
NIP100YPL174C SWD3P38123 315 aa1.41□□□□□ -2.18
NIP100YPL174C CCT6P39079 546 aa1.41□□□□□ -2.18
NIP100YPL174C MRP51Q02950 344 aa1.41□□□□□ -2.18
NIP100YPL174C HER2Q03557 464 aa1.41□□□□□ -2.18
NIP100YPL174C SNX3Q08826 162 aaKnown RBP1.41□□□□□ -2.18
NIP100YPL174C HRT3Q12347 344 aa1.41□□□□□ -2.18
NIP100YPL174C SPS4P09937 338 aa1.41□□□□□ -2.18
NIP100YPL174C RPL3P14126 387 aaKnown RBP1.41□□□□□ -2.18
NIP100YPL174C MUD1P32605 298 aaKnown RBP1.41□□□□□ -2.18
NIP100YPL174C RFS1P38234 210 aaKnown RBP1.41□□□□□ -2.18
NIP100YPL174C NOP16P40007 231 aaKnown RBP1.41□□□□□ -2.18
NIP100YPL174C PRM5P40476 318 aa1.41□□□□□ -2.18
NIP100YPL174C ECM27P47144 725 aa1.41□□□□□ -2.18
NIP100YPL174C YIP1P53039 248 aa1.41□□□□□ -2.18
NIP100YPL174C ODC1Q03028 310 aa1.41□□□□□ -2.18
NIP100YPL174C GIR2Q03768 265 aaPredicted RBP1.41□□□□□ -2.18
NIP100YPL174C YMR027WQ04371 470 aa1.41□□□□□ -2.18
NIP100YPL174C SEC39Q12745 709 aa1.41□□□□□ -2.18
NIP100YPL174C YLR278CQ05854 1341 aa1.41□□□□□ -2.18
NIP100YPL174C SLY1P22213 666 aa1.4□□□□□ -2.18
NIP100YPL174C ELO2P25358 347 aa1.4□□□□□ -2.18
NIP100YPL174C PRD1P25375 712 aa1.4□□□□□ -2.18
NIP100YPL174C ESL1P40456 1118 aa1.4□□□□□ -2.18
NIP100YPL174C SYG1P40528 902 aa1.4□□□□□ -2.18
NIP100YPL174C HXT14P42833 540 aa1.4□□□□□ -2.18
NIP100YPL174C YGL108CP53139 140 aa1.4□□□□□ -2.18
NIP100YPL174C DRN1P53255 507 aaKnown RBP1.4□□□□□ -2.18
NIP100YPL174C PPM1Q04081 328 aa1.4□□□□□ -2.18
NIP100YPL174C YDR387CQ04162 555 aa1.4□□□□□ -2.18
NIP100YPL174C MFB1Q04922 465 aa1.4□□□□□ -2.18
NIP100YPL174C TIM18Q08749 192 aa1.4□□□□□ -2.18
NIP100YPL174C ATG29Q12092 213 aa1.4□□□□□ -2.18
NIP100YPL174C WBP1P33767 430 aaKnown RBP1.4□□□□□ -2.19
NIP100YPL174C TWF1P53250 332 aa1.4□□□□□ -2.19
NIP100YPL174C HAL1Q01766 294 aa1.4□□□□□ -2.19
NIP100YPL174C BET5Q03630 159 aa1.4□□□□□ -2.19
NIP100YPL174C KEL3Q08979 651 aaPredicted RBP1.4□□□□□ -2.19
NIP100YPL174C WTM1Q12363 437 aaKnown RBP1.4□□□□□ -2.19
NIP100YPL174C HIS4P00815 799 aaKnown RBP1.39□□□□□ -2.19
NIP100YPL174C ARG4P04076 463 aaPredicted RBP1.39□□□□□ -2.19
NIP100YPL174C ATP10P18496 279 aa1.39□□□□□ -2.19
NIP100YPL174C PPH22P23595 377 aa1.39□□□□□ -2.19
NIP100YPL174C SPB1P25582 841 aaPredicted RBP1.39□□□□□ -2.19
NIP100YPL174C UTH1P36135 365 aa1.39□□□□□ -2.19
NIP100YPL174C HMS2P47175 358 aa1.39□□□□□ -2.19
NIP100YPL174C ART5P53244 586 aaKnown RBP1.39□□□□□ -2.19
NIP100YPL174C VPS75P53853 264 aa1.39□□□□□ -2.19
NIP100YPL174C ADA2Q02336 434 aa1.39□□□□□ -2.19
NIP100YPL174C MHR1Q06630 226 aa1.39□□□□□ -2.19
NIP100YPL174C TMS1Q12116 473 aa1.39□□□□□ -2.19
NIP100YPL174C NAT1P12945 854 aaKnown RBP1.39□□□□□ -2.19
NIP100YPL174C PCL1P24867 279 aa1.39□□□□□ -2.19
NIP100YPL174C POP5P28005 173 aa1.39□□□□□ -2.19
NIP100YPL174C GPI10P30777 616 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms