RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W TFB1P32776 642 aa2.29□□□□□ -2.04
BRO1YPL084W NIP100P33420 868 aa2.29□□□□□ -2.04
BRO1YPL084W ARA1P38115 344 aa2.29□□□□□ -2.04
BRO1YPL084W FAU1P40099 211 aa2.29□□□□□ -2.04
BRO1YPL084W COS5P47187 383 aa2.29□□□□□ -2.04
BRO1YPL084W DON1Q05610 365 aa2.29□□□□□ -2.04
BRO1YPL084W COS7Q07788 383 aa2.29□□□□□ -2.04
BRO1YPL084W KOG1P38873 1557 aa2.29□□□□□ -2.04
BRO1YPL084W GPH1P06738 902 aaKnown RBP2.29□□□□□ -2.04
BRO1YPL084W SRV2P17555 526 aaKnown RBP2.29□□□□□ -2.04
BRO1YPL084W SNT1P25357 1226 aa2.29□□□□□ -2.04
BRO1YPL084W YCR022CP25620 114 aa2.29□□□□□ -2.04
BRO1YPL084W ATS1P31386 333 aa2.29□□□□□ -2.04
BRO1YPL084W PRP21P32524 280 aaPredicted RBP2.29□□□□□ -2.04
BRO1YPL084W FRE2P36033 711 aa2.29□□□□□ -2.04
BRO1YPL084W APE3P37302 537 aaKnown RBP2.29□□□□□ -2.04
BRO1YPL084W YJL070CP40361 888 aa2.29□□□□□ -2.04
BRO1YPL084W ART5P53244 586 aaKnown RBP2.29□□□□□ -2.04
BRO1YPL084W AIM32Q04689 311 aa2.29□□□□□ -2.04
BRO1YPL084W VPS74Q06385 345 aa2.29□□□□□ -2.04
BRO1YPL084W DAP1Q12091 152 aa2.29□□□□□ -2.04
BRO1YPL084W NDC1P32500 655 aa2.28□□□□□ -2.04
BRO1YPL084W ISC1P40015 477 aaKnown RBP2.28□□□□□ -2.04
BRO1YPL084W TFG2P41896 400 aaPredicted RBP2.28□□□□□ -2.04
BRO1YPL084W ELP2P42935 788 aa2.28□□□□□ -2.04
BRO1YPL084W RPS0BP46654 252 aaKnown RBP2.28□□□□□ -2.04
BRO1YPL084W NCS2P53923 493 aaPredicted RBP2.28□□□□□ -2.04
BRO1YPL084W RPM2Q02773 1202 aa2.28□□□□□ -2.04
BRO1YPL084W YDR387CQ04162 555 aa2.28□□□□□ -2.04
BRO1YPL084W RIP1P08067 215 aa2.28□□□□□ -2.04
BRO1YPL084W MTF1P14908 341 aaKnown RBP2.28□□□□□ -2.04
BRO1YPL084W GYP6P32806 458 aa2.28□□□□□ -2.04
BRO1YPL084W REC114P32841 428 aa2.28□□□□□ -2.04
BRO1YPL084W RSM22P36056 628 aa2.28□□□□□ -2.04
BRO1YPL084W MTC4P38335 694 aaKnown RBP2.28□□□□□ -2.04
BRO1YPL084W SHO1P40073 367 aa2.28□□□□□ -2.04
BRO1YPL084W CAK1P43568 368 aaPredicted RBP2.28□□□□□ -2.04
BRO1YPL084W RTT101P47050 842 aa2.28□□□□□ -2.04
BRO1YPL084W YML6P51998 286 aa2.28□□□□□ -2.04
BRO1YPL084W OGG1P53397 376 aaPredicted RBP2.28□□□□□ -2.04
BRO1YPL084W HSP31Q04432 237 aa2.28□□□□□ -2.04
BRO1YPL084W CCT2P39076 527 aaKnown RBP2.27□□□□□ -2.05
BRO1YPL084W GWT1P47026 490 aa2.27□□□□□ -2.05
BRO1YPL084W YIF1P53845 314 aaKnown RBP2.27□□□□□ -2.05
BRO1YPL084W DSL1P53847 754 aa2.27□□□□□ -2.05
BRO1YPL084W SKO1Q02100 647 aa2.27□□□□□ -2.05
BRO1YPL084W NDD1Q08887 554 aa2.27□□□□□ -2.05
BRO1YPL084W VPS54Q12071 889 aa2.27□□□□□ -2.05
BRO1YPL084W TIP41Q12199 356 aa2.27□□□□□ -2.05
BRO1YPL084W VAM3Q12241 283 aa2.27□□□□□ -2.05
BRO1YPL084W YLR278CQ05854 1341 aa2.27□□□□□ -2.05
BRO1YPL084W CPR2P23285 205 aa2.27□□□□□ -2.05
BRO1YPL084W HIR2P32480 875 aa2.27□□□□□ -2.05
BRO1YPL084W TCB2P48231 1178 aa2.27□□□□□ -2.05
BRO1YPL084W PCP1P53259 346 aa2.27□□□□□ -2.05
BRO1YPL084W SET6Q12529 373 aa2.27□□□□□ -2.05
BRO1YPL084W RPL15AP05748 204 aaKnown RBP2.26□□□□□ -2.05
BRO1YPL084W YML002WP0CF17 737 aa2.26□□□□□ -2.05
BRO1YPL084W URA4P20051 364 aa2.26□□□□□ -2.05
BRO1YPL084W RHB1P25378 209 aa2.26□□□□□ -2.05
BRO1YPL084W BEM1P29366 551 aa2.26□□□□□ -2.05
BRO1YPL084W SPC110P32380 944 aa2.26□□□□□ -2.05
BRO1YPL084W RTT107P38850 1070 aa2.26□□□□□ -2.05
BRO1YPL084W HAT2P39984 401 aa2.26□□□□□ -2.05
BRO1YPL084W RPR2P40571 144 aa2.26□□□□□ -2.05
BRO1YPL084W SAS2P40963 338 aa2.26□□□□□ -2.05
BRO1YPL084W YFR016CP43597 1233 aaKnown RBP2.26□□□□□ -2.05
BRO1YPL084W HCR1Q05775 265 aaKnown RBP2.26□□□□□ -2.05
BRO1YPL084W AYT1Q12226 474 aa2.26□□□□□ -2.05
BRO1YPL084W HSP42Q12329 375 aa2.26□□□□□ -2.05
BRO1YPL084W SEC63P14906 663 aa2.26□□□□□ -2.05
BRO1YPL084W RPI1P23250 407 aaKnown RBP2.26□□□□□ -2.05
BRO1YPL084W YCR100CP25606 316 aa2.26□□□□□ -2.05
BRO1YPL084W SIN4P32259 974 aa2.26□□□□□ -2.05
BRO1YPL084W APE2P32454 952 aaKnown RBP2.26□□□□□ -2.05
BRO1YPL084W MMS4P38257 691 aa2.26□□□□□ -2.05
BRO1YPL084W RRT2P38332 387 aa2.26□□□□□ -2.05
BRO1YPL084W RPH1P39956 796 aa2.26□□□□□ -2.05
BRO1YPL084W HOT1Q03213 719 aa2.26□□□□□ -2.05
BRO1YPL084W ACL4Q03771 387 aa2.26□□□□□ -2.05
BRO1YPL084W YMR130WQ04223 302 aa2.26□□□□□ -2.05
BRO1YPL084W GYL1Q04322 720 aa2.26□□□□□ -2.05
BRO1YPL084W YMR317WQ04893 1140 aa2.26□□□□□ -2.05
BRO1YPL084W MDM30Q05930 598 aa2.26□□□□□ -2.05
BRO1YPL084W DIS3Q08162 1001 aaKnown RBP2.26□□□□□ -2.05
BRO1YPL084W CYB2P00175 591 aa2.25□□□□□ -2.05
BRO1YPL084W RPL20AP0CX23 172 aaKnown RBP2.25□□□□□ -2.05
BRO1YPL084W RPL20BP0CX24 172 aaPredicted RBP2.25□□□□□ -2.05
BRO1YPL084W MDH1P17505 334 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
BRO1YPL084W BRF1P29056 596 aa2.25□□□□□ -2.05
BRO1YPL084W PRO3P32263 286 aaKnown RBP2.25□□□□□ -2.05
BRO1YPL084W NDI1P32340 513 aa2.25□□□□□ -2.05
BRO1YPL084W PEX5P35056 612 aa2.25□□□□□ -2.05
BRO1YPL084W PIM1P36775 1133 aa2.25□□□□□ -2.05
BRO1YPL084W SLM4P38247 162 aa2.25□□□□□ -2.05
BRO1YPL084W RFC3P38629 340 aa2.25□□□□□ -2.05
BRO1YPL084W DHH1P39517 506 aaKnown RBP2.25□□□□□ -2.05
BRO1YPL084W YAT2P40017 923 aa2.25□□□□□ -2.05
BRO1YPL084W CRZ1P53968 678 aa2.25□□□□□ -2.05
BRO1YPL084W PNG1Q02890 363 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms