RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W LTP1P40347 161 aa5.92□□□□□ -1.46
CAF40YNL288W PRM2P40534 656 aa5.92□□□□□ -1.46
CAF40YNL288W TDA10P42938 290 aa5.92□□□□□ -1.46
CAF40YNL288W STB2P46679 850 aa5.92□□□□□ -1.46
CAF40YNL288W MAD3P47074 515 aa5.92□□□□□ -1.46
CAF40YNL288W HXT16P47185 567 aa5.92□□□□□ -1.46
CAF40YNL288W GTR2P53290 341 aa5.92□□□□□ -1.46
CAF40YNL288W YNL260CP53846 198 aa5.92□□□□□ -1.46
CAF40YNL288W MRS2Q01926 470 aa5.92□□□□□ -1.46
CAF40YNL288W VHS1Q03785 461 aa5.92□□□□□ -1.46
CAF40YNL288W SHE9Q04172 456 aa5.92□□□□□ -1.46
CAF40YNL288W YMR034CQ05131 434 aaPredicted RBP5.92□□□□□ -1.46
CAF40YNL288W RIF2Q06208 395 aa5.92□□□□□ -1.46
CAF40YNL288W ENT4Q07872 247 aa5.92□□□□□ -1.46
CAF40YNL288W ATG34Q12292 412 aa5.92□□□□□ -1.46
CAF40YNL288W NOT5Q12514 560 aaPredicted RBP5.92□□□□□ -1.46
CAF40YNL288W RPL1AP0CX43 217 aaKnown RBP5.91□□□□□ -1.46
CAF40YNL288W RPL1BP0CX44 217 aaKnown RBP5.91□□□□□ -1.46
CAF40YNL288W LAT1P12695 482 aaKnown RBP5.91□□□□□ -1.46
CAF40YNL288W SNF5P18480 905 aa5.91□□□□□ -1.46
CAF40YNL288W PET309P32522 965 aaPredicted RBP5.91□□□□□ -1.46
CAF40YNL288W CBF5P33322 483 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
CAF40YNL288W HSM3P38348 480 aa5.91□□□□□ -1.46
CAF40YNL288W YHR033WP38690 423 aa5.91□□□□□ -1.46
CAF40YNL288W BZZ1P38822 633 aa5.91□□□□□ -1.46
CAF40YNL288W AXL2P38928 823 aa5.91□□□□□ -1.46
CAF40YNL288W YDR089WP38966 869 aa5.91□□□□□ -1.46
CAF40YNL288W TY4A-JP47023 414 aa5.91□□□□□ -1.46
CAF40YNL288W YJR030CP47101 745 aa5.91□□□□□ -1.46
CAF40YNL288W PIN2Q12057 282 aa5.91□□□□□ -1.46
CAF40YNL288W RKM5Q12367 367 aa5.91□□□□□ -1.46
CAF40YNL288W SRN2Q99176 213 aa5.91□□□□□ -1.46
CAF40YNL288W SPT3P06844 337 aa5.9□□□□□ -1.46
CAF40YNL288W GUK1P15454 187 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W FUR1P18562 216 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W RPC19P28000 142 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W CDC13P32797 924 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W DOM34P33309 386 aa5.9□□□□□ -1.46
CAF40YNL288W SDH3P33421 198 aa5.9□□□□□ -1.46
CAF40YNL288W RMA1P36001 430 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W RRN3P36070 627 aa5.9□□□□□ -1.46
CAF40YNL288W MCM7P38132 845 aa5.9□□□□□ -1.46
CAF40YNL288W YBR062CP38239 180 aa5.9□□□□□ -1.46
CAF40YNL288W SEC31P38968 1273 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W VMA13P41807 478 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W GCD10P41814 478 aa5.9□□□□□ -1.46
CAF40YNL288W YFR020WP43600 232 aa5.9□□□□□ -1.46
CAF40YNL288W MET12P46151 657 aa5.9□□□□□ -1.46
CAF40YNL288W HNT2P49775 206 aa5.9□□□□□ -1.46
CAF40YNL288W RTS3P53289 263 aa5.9□□□□□ -1.46
CAF40YNL288W AAT1Q01802 451 aa5.9□□□□□ -1.46
CAF40YNL288W RRN11Q04712 507 aa5.9□□□□□ -1.46
CAF40YNL288W YDR262WQ12331 272 aa5.9□□□□□ -1.46
CAF40YNL288W GPR1Q12361 961 aa5.9□□□□□ -1.46
CAF40YNL288W YPT6Q99260 215 aa5.9□□□□□ -1.46
CAF40YNL288W HRP1Q99383 534 aaKnown RBP5.9□□□□□ -1.46
CAF40YNL288W YMR085WP0CF18 432 aa5.89□□□□□ -1.47
CAF40YNL288W CDC34P14682 295 aa5.89□□□□□ -1.47
CAF40YNL288W ART10P18634 518 aaKnown RBP5.89□□□□□ -1.47
CAF40YNL288W CWP1P28319 239 aa5.89□□□□□ -1.47
CAF40YNL288W BAP2P38084 609 aa5.89□□□□□ -1.47
CAF40YNL288W CTP1P38152 299 aa5.89□□□□□ -1.47
CAF40YNL288W GGC1P38988 300 aa5.89□□□□□ -1.47
CAF40YNL288W SCS2P40075 244 aaKnown RBP5.89□□□□□ -1.47
CAF40YNL288W LRO1P40345 661 aa5.89□□□□□ -1.47
CAF40YNL288W FKH2P41813 862 aa5.89□□□□□ -1.47
CAF40YNL288W YJR154WP47181 346 aa5.89□□□□□ -1.47
CAF40YNL288W MRM2P53123 320 aa5.89□□□□□ -1.47
CAF40YNL288W YGR250CP53316 781 aaKnown RBP5.89□□□□□ -1.47
CAF40YNL288W NOP19P53317 196 aaPredicted RBP5.89□□□□□ -1.47
CAF40YNL288W GAS3Q03655 524 aa5.89□□□□□ -1.47
CAF40YNL288W CTK1Q03957 528 aaKnown RBP5.89□□□□□ -1.47
CAF40YNL288W YLR456WQ06199 204 aa5.89□□□□□ -1.47
CAF40YNL288W RAD34Q06665 692 aa5.89□□□□□ -1.47
CAF40YNL288W GPB1Q08886 897 aa5.89□□□□□ -1.47
CAF40YNL288W YLR049CQ12110 428 aa5.89□□□□□ -1.47
CAF40YNL288W YPR011CQ12251 326 aa5.89□□□□□ -1.47
CAF40YNL288W RGT2Q12300 763 aa5.89□□□□□ -1.47
CAF40YNL288W YCL012CQ8J0M4 134 aa5.89□□□□□ -1.47
CAF40YNL288W COS2P0CX12 379 aa5.88□□□□□ -1.47
CAF40YNL288W COS3P0CX13 379 aa5.88□□□□□ -1.47
CAF40YNL288W CMP2P14747 604 aa5.88□□□□□ -1.47
CAF40YNL288W PRP6P19735 899 aaPredicted RBP5.88□□□□□ -1.47
CAF40YNL288W PTP1P25044 335 aa5.88□□□□□ -1.47
CAF40YNL288W BUB2P26448 306 aaPredicted RBP5.88□□□□□ -1.47
CAF40YNL288W HXT4P32467 576 aa5.88□□□□□ -1.47
CAF40YNL288W NIP1P32497 812 aaKnown RBP5.88□□□□□ -1.47
CAF40YNL288W SFC1P33303 322 aa5.88□□□□□ -1.47
CAF40YNL288W SKN1P33336 771 aa5.88□□□□□ -1.47
CAF40YNL288W EMC3P36039 253 aa5.88□□□□□ -1.47
CAF40YNL288W BMT2P38278 337 aa5.88□□□□□ -1.47
CAF40YNL288W VPS41P38959 992 aa5.88□□□□□ -1.47
CAF40YNL288W LYS1P38998 373 aaRIP-Chip data5.88□□□□□ -1.47 RIP-Chip
CAF40YNL288W HXT6P39003 570 aaKnown RBP5.88□□□□□ -1.47
CAF40YNL288W HXT7P39004 570 aa5.88□□□□□ -1.47
CAF40YNL288W COS4P43542 379 aa5.88□□□□□ -1.47
CAF40YNL288W DUG1P43616 481 aaKnown RBP5.88□□□□□ -1.47
CAF40YNL288W YJL049WP47048 450 aa5.88□□□□□ -1.47
CAF40YNL288W SGF73P53165 657 aa5.88□□□□□ -1.47
CAF40YNL288W ARE2P53629 642 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms