RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C TMA16Q08687 178 aa0.86□□□□□ -2.27
RKR1YMR247C MRN1Q08925 612 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27not detected
RKR1YMR247C RPN5Q12250 445 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C ATG34Q12292 412 aa0.86□□□□□ -2.27
RKR1YMR247C MED1Q12321 566 aa0.86□□□□□ -2.27
RKR1YMR247C RAD61Q99359 647 aa0.86□□□□□ -2.27
RKR1YMR247C COX1P00401 534 aa0.86□□□□□ -2.27
RKR1YMR247C YPT1P01123 206 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C SCEIP03882 235 aa0.86□□□□□ -2.27
RKR1YMR247C RPL6BP05739 176 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C ADE3P07245 946 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C GPA1P08539 472 aa0.86□□□□□ -2.27
RKR1YMR247C CDC16P09798 840 aa0.86□□□□□ -2.27
RKR1YMR247C EST1P17214 699 aaPredicted RBP0.86□□□□□ -2.27
RKR1YMR247C SEC18P18759 758 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C NUP1P20676 1076 aa0.86□□□□□ -2.27
RKR1YMR247C ACH1P32316 526 aa0.86□□□□□ -2.27
RKR1YMR247C VPH2P32341 215 aa0.86□□□□□ -2.27
RKR1YMR247C YBL059WP34224 193 aa0.86□□□□□ -2.27
RKR1YMR247C SKT5P34226 696 aa0.86□□□□□ -2.27
RKR1YMR247C TUL1P36096 758 aa0.86□□□□□ -2.27
RKR1YMR247C YKR015CP36111 568 aa0.86□□□□□ -2.27
RKR1YMR247C ROT2P38138 954 aa0.86□□□□□ -2.27
RKR1YMR247C REG2P38232 338 aa0.86□□□□□ -2.27
RKR1YMR247C EHT1P38295 451 aa0.86□□□□□ -2.27
RKR1YMR247C PCA1P38360 1216 aa0.86□□□□□ -2.27
RKR1YMR247C TIF5P38431 405 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C RFC1P38630 861 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C ARO9P38840 513 aaPredicted RBP0.86□□□□□ -2.27
RKR1YMR247C AXL1P40851 1208 aa0.86□□□□□ -2.27
RKR1YMR247C TFG2P41896 400 aaPredicted RBP0.86□□□□□ -2.27
RKR1YMR247C FET5P43561 622 aa0.86□□□□□ -2.27
RKR1YMR247C YGL260WP53056 76 aa0.86□□□□□ -2.27
RKR1YMR247C CAF130P53280 1122 aaPredicted RBP0.86□□□□□ -2.27
RKR1YMR247C BOR1P53838 576 aa0.86□□□□□ -2.27
RKR1YMR247C MTQ1P53944 314 aa0.86□□□□□ -2.27
RKR1YMR247C RPL6AQ02326 176 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C VHS1Q03785 461 aa0.86□□□□□ -2.27
RKR1YMR247C IVY1Q04934 453 aa0.86□□□□□ -2.27
RKR1YMR247C RBS1Q05672 457 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C VPS38Q05919 439 aa0.86□□□□□ -2.27
RKR1YMR247C NDL1Q06568 189 aa0.86□□□□□ -2.27
RKR1YMR247C AAD15Q08361 143 aa0.86□□□□□ -2.27
RKR1YMR247C RDR1Q08904 546 aa0.86□□□□□ -2.27
RKR1YMR247C PLP2Q12017 286 aa0.86□□□□□ -2.27
RKR1YMR247C CFT2Q12102 859 aaPredicted RBP0.86□□□□□ -2.27
RKR1YMR247C GCN2P15442 1659 aa0.86□□□□□ -2.27
RKR1YMR247C HIP1P06775 603 aa0.86□□□□□ -2.27
RKR1YMR247C PDA1P16387 420 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C ERG8P24521 451 aa0.86□□□□□ -2.27
RKR1YMR247C YME1P32795 747 aa0.86□□□□□ -2.27
RKR1YMR247C COX13P32799 129 aa0.86□□□□□ -2.27
RKR1YMR247C SIP2P34164 415 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C OSH3P38713 996 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C DFG10P40526 253 aa0.86□□□□□ -2.27
RKR1YMR247C SNG1P46950 547 aa0.86□□□□□ -2.27
RKR1YMR247C IKS1P47042 667 aa0.86□□□□□ -2.27
RKR1YMR247C VHT1P53241 593 aa0.86□□□□□ -2.27
RKR1YMR247C ARK1P53974 638 aa0.86□□□□□ -2.27
RKR1YMR247C YDR415CQ04033 374 aaPredicted RBP0.86□□□□□ -2.27
RKR1YMR247C SMC5Q08204 1093 aa0.86□□□□□ -2.27
RKR1YMR247C YOL057WQ08225 711 aa0.86□□□□□ -2.27
RKR1YMR247C RPN8Q08723 338 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C NDD1Q08887 554 aa0.86□□□□□ -2.27
RKR1YMR247C ECM5Q03214 1411 aa0.86□□□□□ -2.27
RKR1YMR247C IQG1Q12280 1495 aa0.86□□□□□ -2.27
RKR1YMR247C DUR1,2P32528 1835 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C MYO2P19524 1574 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C INH1P01097 85 aa0.86□□□□□ -2.27
RKR1YMR247C PAB1P04147 577 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27 RIP-Chip
RKR1YMR247C RPL15AP05748 204 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C HOM3P10869 527 aa0.86□□□□□ -2.27
RKR1YMR247C CKA1P15790 372 aa0.86□□□□□ -2.27
RKR1YMR247C YSP3P25036 478 aa0.86□□□□□ -2.27
RKR1YMR247C DAL2P25335 343 aa0.86□□□□□ -2.27
RKR1YMR247C MGR1P25573 417 aa0.86□□□□□ -2.27
RKR1YMR247C ALY1P36117 915 aa0.86□□□□□ -2.27
RKR1YMR247C FMP46P36141 133 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C BMT2P38278 337 aa0.86□□□□□ -2.27
RKR1YMR247C YHI9P38765 294 aa0.86□□□□□ -2.27
RKR1YMR247C YAL037WP39728 267 aa0.86□□□□□ -2.27
RKR1YMR247C MET18P40469 1032 aa0.86□□□□□ -2.27
RKR1YMR247C SWP82P43554 623 aa0.86□□□□□ -2.27
RKR1YMR247C SFH5P47008 294 aa0.86□□□□□ -2.27
RKR1YMR247C SHY1P53266 389 aa0.86□□□□□ -2.27
RKR1YMR247C YNR048WP53740 393 aa0.86□□□□□ -2.27
RKR1YMR247C INN1P53901 409 aa0.86□□□□□ -2.27
RKR1YMR247C GTR1Q00582 310 aa0.86□□□□□ -2.27
RKR1YMR247C MMT1Q03218 510 aa0.86□□□□□ -2.27
RKR1YMR247C YMR206WQ03695 313 aa0.86□□□□□ -2.27
RKR1YMR247C RCF1Q03713 159 aa0.86□□□□□ -2.27
RKR1YMR247C PRP42Q03776 544 aaKnown RBP0.86□□□□□ -2.27
RKR1YMR247C URH1Q04179 340 aa0.86□□□□□ -2.27
RKR1YMR247C YMR111CQ04461 462 aaPredicted RBP0.86□□□□□ -2.27
RKR1YMR247C COG4Q06096 861 aa0.86□□□□□ -2.27
RKR1YMR247C YBT1P32386 1661 aa0.86□□□□□ -2.27
RKR1YMR247C MRP13P12686 339 aa0.85□□□□□ -2.27
RKR1YMR247C LSB5P25369 354 aa0.85□□□□□ -2.27
RKR1YMR247C PMU1P36069 295 aa0.85□□□□□ -2.27
RKR1YMR247C MRPS9P38120 278 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms