RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C MRPL4P36517 319 aa3.22□□□□□ -1.89
VPS9YML097C YER130CP39959 443 aa3.22□□□□□ -1.89
VPS9YML097C TFG2P41896 400 aaPredicted RBP3.22□□□□□ -1.89
VPS9YML097C EAF7P53911 425 aaKnown RBP3.22□□□□□ -1.89
VPS9YML097C CTL1Q03220 320 aaKnown RBP3.22□□□□□ -1.89
VPS9YML097C VTI1Q04338 217 aa3.22□□□□□ -1.89
VPS9YML097C POS5Q06892 414 aa3.22□□□□□ -1.89
VPS9YML097C OSW1Q08692 278 aa3.22□□□□□ -1.89
VPS9YML097C HER1Q12276 1246 aa3.22□□□□□ -1.89
VPS9YML097C BNR1P40450 1375 aa3.22□□□□□ -1.89
VPS9YML097C HOM2P13663 365 aaKnown RBP3.21□□□□□ -1.9
VPS9YML097C RPI1P23250 407 aaKnown RBP3.21□□□□□ -1.9
VPS9YML097C SNC1P31109 117 aa3.21□□□□□ -1.9
VPS9YML097C SIN4P32259 974 aa3.21□□□□□ -1.9
VPS9YML097C YEL043WP32618 956 aa3.21□□□□□ -1.9
VPS9YML097C PEX2P32800 271 aa3.21□□□□□ -1.9
VPS9YML097C SOR1P35497 357 aaKnown RBP3.21□□□□□ -1.9
VPS9YML097C ASC1P38011 319 aaKnown RBP3.21□□□□□ -1.9
VPS9YML097C RRN10P38204 145 aa3.21□□□□□ -1.9
VPS9YML097C RRP4P38792 359 aaKnown RBP3.21□□□□□ -1.9
VPS9YML097C MNL1P38888 796 aa3.21□□□□□ -1.9
VPS9YML097C MLH1P38920 769 aa3.21□□□□□ -1.9
VPS9YML097C PHO90P39535 881 aa3.21□□□□□ -1.9
VPS9YML097C NAS2P40555 220 aa3.21□□□□□ -1.9
VPS9YML097C CHS6P40955 746 aa3.21□□□□□ -1.9
VPS9YML097C QRI1P43123 477 aaKnown RBP3.21□□□□□ -1.9
VPS9YML097C YJR154WP47181 346 aa3.21□□□□□ -1.9
VPS9YML097C ROG1P53118 685 aa3.21□□□□□ -1.9
VPS9YML097C NUP100Q02629 959 aa3.21□□□□□ -1.9
VPS9YML097C RSC9Q03124 581 aa3.21□□□□□ -1.9
VPS9YML097C IZH1Q03419 316 aa3.21□□□□□ -1.9
VPS9YML097C RPN9Q04062 393 aaKnown RBP3.21□□□□□ -1.9
VPS9YML097C RBA50Q04418 439 aa3.21□□□□□ -1.9
VPS9YML097C IVY1Q04934 453 aa3.21□□□□□ -1.9
VPS9YML097C GLO2Q05584 274 aa3.21□□□□□ -1.9
VPS9YML097C PHO92Q06390 306 aa3.21□□□□□ -1.9
VPS9YML097C SOR2Q07786 357 aa3.21□□□□□ -1.9
VPS9YML097C NRT1Q08485 598 aa3.21□□□□□ -1.9
VPS9YML097C UBX3Q12229 455 aa3.21□□□□□ -1.9
VPS9YML097C RRD2Q12461 358 aa3.21□□□□□ -1.9
VPS9YML097C LEU4P06208 619 aaKnown RBP3.2□□□□□ -1.9
VPS9YML097C TUB1P09733 447 aaKnown RBP3.2□□□□□ -1.9
VPS9YML097C YAP1P19880 650 aaKnown RBP3.2□□□□□ -1.9
VPS9YML097C PHO91P27514 894 aa3.2□□□□□ -1.9
VPS9YML097C PRP21P32524 280 aaPredicted RBP3.2□□□□□ -1.9
VPS9YML097C PDR3P33200 976 aa3.2□□□□□ -1.9
VPS9YML097C GDT1P38301 280 aaPredicted RBP3.2□□□□□ -1.9
VPS9YML097C PCA1P38360 1216 aa3.2□□□□□ -1.9
VPS9YML097C PCF11P39081 626 aaPredicted RBP3.2□□□□□ -1.9
VPS9YML097C OSW5P40219 148 aa3.2□□□□□ -1.9
VPS9YML097C SNO3P43544 222 aa3.2□□□□□ -1.9
VPS9YML097C NMD5P46970 1048 aa3.2□□□□□ -1.9
VPS9YML097C COP1P53622 1201 aaKnown RBP3.2□□□□□ -1.9
VPS9YML097C DSL1P53847 754 aa3.2□□□□□ -1.9
VPS9YML097C PDR16P53860 351 aaKnown RBP3.2□□□□□ -1.9
VPS9YML097C IDP3P53982 420 aaKnown RBP3.2□□□□□ -1.9
VPS9YML097C RHO4Q00246 291 aa3.2□□□□□ -1.9
VPS9YML097C SMA1Q02651 245 aa3.2□□□□□ -1.9
VPS9YML097C EKI1Q03764 534 aa3.2□□□□□ -1.9
VPS9YML097C YDR387CQ04162 555 aa3.2□□□□□ -1.9
VPS9YML097C HSP31Q04432 237 aa3.2□□□□□ -1.9
VPS9YML097C MDM30Q05930 598 aa3.2□□□□□ -1.9
VPS9YML097C MDY2Q12285 212 aa3.2□□□□□ -1.9
VPS9YML097C APE2P32454 952 aaKnown RBP3.19□□□□□ -1.9
VPS9YML097C PHD1P36093 366 aa3.19□□□□□ -1.9
VPS9YML097C FLO10P36170 1169 aa3.19□□□□□ -1.9
VPS9YML097C EFM2P38347 419 aa3.19□□□□□ -1.9
VPS9YML097C YIL024CP40543 189 aa3.19□□□□□ -1.9
VPS9YML097C SAS2P40963 338 aa3.19□□□□□ -1.9
VPS9YML097C GPI1P53306 609 aa3.19□□□□□ -1.9
VPS9YML097C YNL143CP53908 130 aa3.19□□□□□ -1.9
VPS9YML097C CAC2Q04199 468 aa3.19□□□□□ -1.9
VPS9YML097C RKM5Q12367 367 aa3.19□□□□□ -1.9
VPS9YML097C COX3P00420 269 aa3.18□□□□□ -1.9
VPS9YML097C SUC2P00724 532 aa3.18□□□□□ -1.9
VPS9YML097C STE3P06783 470 aa3.18□□□□□ -1.9
VPS9YML097C RPL42AP0CX27 106 aaKnown RBP3.18□□□□□ -1.9
VPS9YML097C RPL42BP0CX28 106 aaKnown RBP3.18□□□□□ -1.9
VPS9YML097C SCH9P11792 824 aaKnown RBP3.18□□□□□ -1.9
VPS9YML097C ALG1P16661 449 aa3.18□□□□□ -1.9
VPS9YML097C ECM25P32525 599 aa3.18□□□□□ -1.9
VPS9YML097C OLA1P38219 394 aaKnown RBP3.18□□□□□ -1.9
VPS9YML097C ERG7P38604 731 aa3.18□□□□□ -1.9
VPS9YML097C CCT2P39076 527 aaKnown RBP3.18□□□□□ -1.9
VPS9YML097C PCL7P40186 285 aa3.18□□□□□ -1.9
VPS9YML097C SNM1P40993 198 aa3.18□□□□□ -1.9
VPS9YML097C SCD6P45978 349 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9 RIP-Chip
VPS9YML097C TOM22P49334 152 aa3.18□□□□□ -1.9
VPS9YML097C SHE4P51534 789 aa3.18□□□□□ -1.9
VPS9YML097C RRP46P53256 223 aaPredicted RBP3.18□□□□□ -1.9
VPS9YML097C PCP1P53259 346 aa3.18□□□□□ -1.9
VPS9YML097C ERG13P54839 491 aaKnown RBP3.18□□□□□ -1.9
VPS9YML097C RKM1Q08961 583 aaPredicted RBP3.18□□□□□ -1.9
VPS9YML097C CRC1Q12289 327 aa3.18□□□□□ -1.9
VPS9YML097C SCEIP03882 235 aa3.17□□□□□ -1.9
VPS9YML097C CDC21P06785 304 aa3.17□□□□□ -1.9
VPS9YML097C RPC40P07703 335 aaKnown RBP3.17□□□□□ -1.9
VPS9YML097C SEC63P14906 663 aa3.17□□□□□ -1.9
VPS9YML097C TAL1P15019 335 aaKnown RBP3.17□□□□□ -1.9
VPS9YML097C UBA1P22515 1024 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms