RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	TFG2	P41896	400 aa	Predicted RBP	4.38	□□□□□ -1.71
CDA2	YLR308W	GUF1	P46943	645 aa		4.38	□□□□□ -1.71
CDA2	YLR308W	RSC1	P53236	928 aa		4.38	□□□□□ -1.71
CDA2	YLR308W	BNI5	P53890	448 aa	Known RBP	4.38	□□□□□ -1.71
CDA2	YLR308W	SLD5	Q03406	294 aa		4.38	□□□□□ -1.71
CDA2	YLR308W	CFT2	Q12102	859 aa	Predicted RBP	4.38	□□□□□ -1.71
CDA2	YLR308W	YDL009C	Q12210	107 aa		4.38	□□□□□ -1.71
CDA2	YLR308W	CYB2	P00175	591 aa		4.37	□□□□□ -1.71
CDA2	YLR308W	PHO2	P07269	559 aa		4.37	□□□□□ -1.71
CDA2	YLR308W	SGV1	P23293	657 aa	Known RBP	4.37	□□□□□ -1.71
CDA2	YLR308W	URA7	P28274	579 aa	Known RBP	4.37	□□□□□ -1.71
CDA2	YLR308W	RIM2	P38127	377 aa		4.37	□□□□□ -1.71
CDA2	YLR308W	LRP1	P38801	184 aa	Known RBP	4.37	□□□□□ -1.71
CDA2	YLR308W	FAU1	P40099	211 aa		4.37	□□□□□ -1.71
CDA2	YLR308W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
CDA2	YLR308W	ARX1	Q03862	593 aa	Known RBP	4.37	□□□□□ -1.71
CDA2	YLR308W	BNA5	Q05979	453 aa		4.37	□□□□□ -1.71
CDA2	YLR308W	PHO92	Q06390	306 aa		4.37	□□□□□ -1.71
CDA2	YLR308W	ATP10	P18496	279 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	RPS2	P25443	254 aa	Known RBP	4.36	□□□□□ -1.71
CDA2	YLR308W	KRE2	P27809	442 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	FUN19	P28003	413 aa	Predicted RBP	4.36	□□□□□ -1.71
CDA2	YLR308W	BRF1	P29056	596 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	LTV1	P34078	463 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	JEM1	P40358	645 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	ZIM17	P42844	174 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	YJL055W	P47044	245 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	YMR130W	Q04223	302 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	HSP31	Q04432	237 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	AIM32	Q04689	311 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	KEL3	Q08979	651 aa	Predicted RBP	4.36	□□□□□ -1.71
CDA2	YLR308W	VAM3	Q12241	283 aa		4.36	□□□□□ -1.71
CDA2	YLR308W	HIS4	P00815	799 aa	Known RBP	4.35	□□□□□ -1.71
CDA2	YLR308W	MES1	P00958	751 aa	Known RBP	4.35	□□□□□ -1.71
CDA2	YLR308W	RIP1	P08067	215 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	HOM3	P10869	527 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	MTF1	P14908	341 aa	Known RBP	4.35	□□□□□ -1.71
CDA2	YLR308W	YIM1	P28625	365 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	ATP11	P32453	318 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	YHR054C	P38780	354 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	YER130C	P39959	443 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	YJL070C	P40361	888 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	VMA13	P41807	478 aa	Known RBP	4.35	□□□□□ -1.71
CDA2	YLR308W	SSN8	P47821	323 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	DRN1	P53255	507 aa	Known RBP	4.35	□□□□□ -1.71
CDA2	YLR308W	MDG1	P53885	366 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	SYO1	Q07395	620 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	SIL1	Q08199	421 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	DAP1	Q12091	152 aa		4.35	□□□□□ -1.71
CDA2	YLR308W	AMD1	P15274	810 aa	Known RBP	4.34	□□□□□ -1.71
CDA2	YLR308W	PRP21	P32524	280 aa	Predicted RBP	4.34	□□□□□ -1.71
CDA2	YLR308W	PTR2	P32901	601 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	SIP2	P34164	415 aa	Known RBP	4.34	□□□□□ -1.71
CDA2	YLR308W	SYG1	P40528	902 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	IKS1	P47042	667 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	ECM27	P47144	725 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	YGR111W	P53265	400 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	RPT4	P53549	437 aa	Known RBP	4.34	□□□□□ -1.71
CDA2	YLR308W	CRZ1	P53968	678 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	PNG1	Q02890	363 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
CDA2	YLR308W	REX4	Q08237	289 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	VPS54	Q12071	889 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	AEP3	Q12089	606 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	BUG1	Q12191	341 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	CTF3	Q12748	733 aa		4.34	□□□□□ -1.71
CDA2	YLR308W	HIP1	P06775	603 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	YML002W	P0CF17	737 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	YAR066W	P0CX18	203 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	YHR214W	P0CX19	203 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	URA4	P20051	364 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	CLN1	P20437	546 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	SNT1	P25357	1226 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	BUB3	P26449	341 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	FRE1	P32791	686 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	THI2	P38141	450 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	SLM4	P38247	162 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	GDT1	P38301	280 aa	Predicted RBP	4.33	□□□□□ -1.72
CDA2	YLR308W	RRT2	P38332	387 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	RPS0B	P46654	252 aa	Known RBP	4.33	□□□□□ -1.72
CDA2	YLR308W	YJR011C	P47086	261 aa	Predicted RBP	4.33	□□□□□ -1.72
CDA2	YLR308W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
CDA2	YLR308W	ERO1	Q03103	563 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	ACL4	Q03771	387 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	RBA50	Q04418	439 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	YLR345W	Q06137	509 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	DCS1	Q06151	350 aa		4.33	□□□□□ -1.72
CDA2	YLR308W	RKM1	Q08961	583 aa	Predicted RBP	4.33	□□□□□ -1.72
CDA2	YLR308W	YLR278C	Q05854	1341 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	SPO7	P18410	259 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	SIN4	P32259	974 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	APE2	P32454	952 aa	Known RBP	4.32	□□□□□ -1.72
CDA2	YLR308W	HIR2	P32480	875 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	YBP1	P38315	674 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	GDI1	P39958	451 aa	Known RBP	4.32	□□□□□ -1.72
CDA2	YLR308W	TCB2	P48231	1178 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	RPM2	Q02773	1202 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	RTT103	Q05543	409 aa		4.32	□□□□□ -1.72
CDA2	YLR308W	DIS3	Q08162	1001 aa	Known RBP	4.32	□□□□□ -1.72
CDA2	YLR308W	SGT1	Q08446	395 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms