RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W BRF1P29056 596 aa5.25□□□□□ -1.57
CBF1YJR060W RIM1P32445 135 aaKnown RBP5.25□□□□□ -1.57
CBF1YJR060W YLF2P38746 405 aa5.25□□□□□ -1.57
CBF1YJR060W RPH1P39956 796 aa5.25□□□□□ -1.57
CBF1YJR060W PUG1P40100 303 aa5.25□□□□□ -1.57
CBF1YJR060W IME4P41833 600 aa5.25□□□□□ -1.57
CBF1YJR060W MIC19P43594 170 aa5.25□□□□□ -1.57
CBF1YJR060W YGL108CP53139 140 aa5.25□□□□□ -1.57
CBF1YJR060W PEF1P53238 335 aa5.25□□□□□ -1.57
CBF1YJR060W REG1Q00816 1014 aa5.25□□□□□ -1.57
CBF1YJR060W RNT1Q02555 471 aa5.25□□□□□ -1.57
CBF1YJR060W YPL113CQ02961 396 aa5.25□□□□□ -1.57
CBF1YJR060W CCE1Q03702 353 aa5.25□□□□□ -1.57
CBF1YJR060W RPN9Q04062 393 aaKnown RBP5.25□□□□□ -1.57
CBF1YJR060W GAD1Q04792 585 aa5.25□□□□□ -1.57
CBF1YJR060W TSR2Q06672 205 aaKnown RBP5.25□□□□□ -1.57
CBF1YJR060W HBT1Q07653 1046 aaKnown RBP5.25□□□□□ -1.57
CBF1YJR060W TEF1P02994 458 aaKnown RBP5.24□□□□□ -1.57
CBF1YJR060W ILS1P09436 1072 aaKnown RBP5.24□□□□□ -1.57
CBF1YJR060W SEC15P22224 910 aa5.24□□□□□ -1.57
CBF1YJR060W SRX1P36077 127 aa5.24□□□□□ -1.57
CBF1YJR060W STB6P36085 766 aa5.24□□□□□ -1.57
CBF1YJR060W MRPL36P36531 177 aa5.24□□□□□ -1.57
CBF1YJR060W YBP1P38315 674 aa5.24□□□□□ -1.57
CBF1YJR060W SRP72P38688 640 aaKnown RBP5.24□□□□□ -1.57
CBF1YJR060W CCT6P39079 546 aa5.24□□□□□ -1.57
CBF1YJR060W NDE1P40215 560 aa5.24□□□□□ -1.57
CBF1YJR060W SEC28P40509 296 aaKnown RBP5.24□□□□□ -1.57
CBF1YJR060W DSN1P40568 576 aa5.24□□□□□ -1.57
CBF1YJR060W BIT61P47041 543 aa5.24□□□□□ -1.57
CBF1YJR060W MUP1P50276 574 aa5.24□□□□□ -1.57
CBF1YJR060W SWC4P53201 476 aa5.24□□□□□ -1.57
CBF1YJR060W AQR1P53943 586 aa5.24□□□□□ -1.57
CBF1YJR060W SMA1Q02651 245 aa5.24□□□□□ -1.57
CBF1YJR060W HMO1Q03973 246 aaKnown RBP5.24□□□□□ -1.57
CBF1YJR060W CDC123Q05791 360 aa5.24□□□□□ -1.57
CBF1YJR060W VTA1Q06263 330 aa5.24□□□□□ -1.57
CBF1YJR060W YOL073CQ08232 322 aa5.24□□□□□ -1.57
CBF1YJR060W DIA2Q08496 732 aaPredicted RBP5.24□□□□□ -1.57
CBF1YJR060W RPN8Q08723 338 aaKnown RBP5.24□□□□□ -1.57
CBF1YJR060W BUD7Q08754 746 aa5.24□□□□□ -1.57
CBF1YJR060W TRM13Q12383 476 aa5.24□□□□□ -1.57
CBF1YJR060W SUC2P00724 532 aa5.23□□□□□ -1.57
CBF1YJR060W RAD1P06777 1100 aa5.23□□□□□ -1.57
CBF1YJR060W YKR104WP0CE69 306 aa5.23□□□□□ -1.57
CBF1YJR060W NCP1P16603 691 aaKnown RBP5.23□□□□□ -1.57
CBF1YJR060W CBF1P17106 351 aa5.23□□□□□ -1.57
CBF1YJR060W PRE4P30657 266 aa5.23□□□□□ -1.57
CBF1YJR060W RMA1P36001 430 aaKnown RBP5.23□□□□□ -1.57
CBF1YJR060W TAE1P38340 232 aa5.23□□□□□ -1.57
CBF1YJR060W DBP8P38719 431 aa5.23□□□□□ -1.57
CBF1YJR060W YJL070CP40361 888 aa5.23□□□□□ -1.57
CBF1YJR060W PRM2P40534 656 aa5.23□□□□□ -1.57
CBF1YJR060W TES1P41903 349 aaKnown RBP5.23□□□□□ -1.57
CBF1YJR060W PET130P47065 347 aa5.23□□□□□ -1.57
CBF1YJR060W YNL058CP53947 316 aa5.23□□□□□ -1.57
CBF1YJR060W VAC7P53950 1165 aa5.23□□□□□ -1.57
CBF1YJR060W RPC11Q04307 110 aaPredicted RBP5.23□□□□□ -1.57
CBF1YJR060W SLD7Q08457 257 aa5.23□□□□□ -1.57
CBF1YJR060W GTT2Q12390 233 aa5.23□□□□□ -1.57
CBF1YJR060W POM34Q12445 299 aa5.23□□□□□ -1.57
CBF1YJR060W COX3P00420 269 aa5.22□□□□□ -1.57
CBF1YJR060W URA3P03962 267 aa5.22□□□□□ -1.57
CBF1YJR060W CPA1P07258 411 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W ALG7P07286 448 aa5.22□□□□□ -1.57
CBF1YJR060W RPB2P08518 1224 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W AMD2P22580 549 aa5.22□□□□□ -1.57
CBF1YJR060W ILV6P25605 309 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W SPS19P32573 292 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W RML2P32611 393 aa5.22□□□□□ -1.57
CBF1YJR060W TFB1P32776 642 aa5.22□□□□□ -1.57
CBF1YJR060W YPT7P32939 208 aa5.22□□□□□ -1.57
CBF1YJR060W MUM2P38236 366 aa5.22□□□□□ -1.57
CBF1YJR060W IML3P38265 245 aa5.22□□□□□ -1.57
CBF1YJR060W GND1P38720 489 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W UME6P39001 836 aa5.22□□□□□ -1.57
CBF1YJR060W SEO1P39709 593 aa5.22□□□□□ -1.57
CBF1YJR060W SMX2P40204 77 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W ALG8P40351 577 aa5.22□□□□□ -1.57
CBF1YJR060W NOP9P47077 666 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W LSC1P53598 329 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W OSH6Q02201 448 aa5.22□□□□□ -1.57
CBF1YJR060W SPP2Q02521 185 aa5.22□□□□□ -1.57
CBF1YJR060W YDR131CQ03899 556 aa5.22□□□□□ -1.57
CBF1YJR060W CTK1Q03957 528 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W ADE13Q05911 482 aaKnown RBP5.22□□□□□ -1.57
CBF1YJR060W SPT15P13393 240 aaKnown RBP5.21□□□□□ -1.58
CBF1YJR060W EPT1P22140 391 aa5.21□□□□□ -1.58
CBF1YJR060W ARG1P22768 420 aa5.21□□□□□ -1.58
CBF1YJR060W ERG6P25087 383 aaKnown RBP5.21□□□□□ -1.58
CBF1YJR060W SNT1P25357 1226 aa5.21□□□□□ -1.58
CBF1YJR060W MTC7P32633 139 aa5.21□□□□□ -1.58
CBF1YJR060W CHS7P38843 316 aa5.21□□□□□ -1.58
CBF1YJR060W PFS1P38872 237 aa5.21□□□□□ -1.58
CBF1YJR060W CCT2P39076 527 aaKnown RBP5.21□□□□□ -1.58
CBF1YJR060W HAT2P39984 401 aa5.21□□□□□ -1.58
CBF1YJR060W YFL012WP43580 148 aa5.21□□□□□ -1.58
CBF1YJR060W BNA1P47096 177 aa5.21□□□□□ -1.58
CBF1YJR060W URB2P47108 1174 aa5.21□□□□□ -1.58
CBF1YJR060W BIR1P47134 954 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms