RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W FMP46P36141 133 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W CBP4P37267 147 aa6.51□□□□□ -1.37
NUP49YGL172W RRN10P38204 145 aa6.51□□□□□ -1.37
NUP49YGL172W ARN1P38731 627 aa6.51□□□□□ -1.37
NUP49YGL172W MET30P39014 640 aa6.51□□□□□ -1.37
NUP49YGL172W FRT2P39734 528 aa6.51□□□□□ -1.37
NUP49YGL172W DUG1P43616 481 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W YNL140CP53910 189 aa6.51□□□□□ -1.37
NUP49YGL172W UBP2Q01476 1272 aa6.51□□□□□ -1.37
NUP49YGL172W NAN1Q02931 896 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W GIP3Q03016 1276 aa6.51□□□□□ -1.37
NUP49YGL172W MTQ2Q03920 221 aaPredicted RBP6.51□□□□□ -1.37
NUP49YGL172W STP3Q05937 343 aa6.51□□□□□ -1.37
NUP49YGL172W YLR456WQ06199 204 aa6.51□□□□□ -1.37
NUP49YGL172W SGT1Q08446 395 aa6.51□□□□□ -1.37
NUP49YGL172W DIA2Q08496 732 aaPredicted RBP6.51□□□□□ -1.37
NUP49YGL172W RRP36Q12481 300 aaPredicted RBP6.51□□□□□ -1.37
NUP49YGL172W CMR1Q12510 522 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W RRP12Q12754 1228 aaKnown RBP6.51□□□□□ -1.37
NUP49YGL172W TY4A-HQ6Q5P6 413 aa6.51□□□□□ -1.37
NUP49YGL172W STT4P37297 1900 aa6.51□□□□□ -1.37
NUP49YGL172W LEU4P06208 619 aaKnown RBP6.5□□□□□ -1.37
NUP49YGL172W MOD5P07884 428 aa6.5□□□□□ -1.37
NUP49YGL172W FUR1P18562 216 aaKnown RBP6.5□□□□□ -1.37
NUP49YGL172W PRE9P23638 258 aaKnown RBP6.5□□□□□ -1.37
NUP49YGL172W CAF4P36130 643 aa6.5□□□□□ -1.37
NUP49YGL172W YKR078WP36158 585 aaKnown RBP6.5□□□□□ -1.37
NUP49YGL172W APQ12P40532 138 aa6.5□□□□□ -1.37
NUP49YGL172W PTR3P43606 678 aa6.5□□□□□ -1.37
NUP49YGL172W MET12P46151 657 aa6.5□□□□□ -1.37
NUP49YGL172W TIM54P47045 478 aa6.5□□□□□ -1.37
NUP49YGL172W MPS1P54199 764 aa6.5□□□□□ -1.37
NUP49YGL172W ROY1Q04847 553 aa6.5□□□□□ -1.37
NUP49YGL172W DAL4Q04895 635 aa6.5□□□□□ -1.37
NUP49YGL172W DIN7Q12086 430 aa6.5□□□□□ -1.37
NUP49YGL172W SAS5Q99314 248 aa6.5□□□□□ -1.37
NUP49YGL172W RPL40AP0CH08 128 aaKnown RBP6.5□□□□□ -1.37
NUP49YGL172W RPL40BP0CH09 128 aaKnown RBP6.5□□□□□ -1.37
NUP49YGL172W HOP1P20050 605 aa6.5□□□□□ -1.37
NUP49YGL172W PRI2P20457 528 aa6.5□□□□□ -1.37
NUP49YGL172W PTP1P25044 335 aa6.5□□□□□ -1.37
NUP49YGL172W AGP1P25376 633 aa6.5□□□□□ -1.37
NUP49YGL172W BUB3P26449 341 aa6.5□□□□□ -1.37
NUP49YGL172W STE14P32584 239 aa6.5□□□□□ -1.37
NUP49YGL172W KKQ8P36004 724 aa6.5□□□□□ -1.37
NUP49YGL172W APT2P36973 181 aa6.5□□□□□ -1.37
NUP49YGL172W YCR087C-AP37263 153 aa6.5□□□□□ -1.37
NUP49YGL172W YBR071WP38243 211 aa6.5□□□□□ -1.37
NUP49YGL172W AXL2P38928 823 aa6.5□□□□□ -1.37
NUP49YGL172W CCT7P42943 550 aaKnown RBP6.5□□□□□ -1.37
NUP49YGL172W FMP32P43557 207 aa6.5□□□□□ -1.37
NUP49YGL172W GTO1P48239 356 aa6.5□□□□□ -1.37
NUP49YGL172W USE1P53146 245 aa6.5□□□□□ -1.37
NUP49YGL172W PRP38Q00723 242 aaPredicted RBP6.5□□□□□ -1.37
NUP49YGL172W YDR124WQ04608 324 aa6.5□□□□□ -1.37
NUP49YGL172W UAF30Q08747 228 aa6.5□□□□□ -1.37
NUP49YGL172W YOL107WQ12239 342 aa6.5□□□□□ -1.37
NUP49YGL172W KAR1P11927 433 aa6.49□□□□□ -1.37
NUP49YGL172W VMA3P25515 160 aa6.49□□□□□ -1.37
NUP49YGL172W ADE1P27616 306 aa6.49□□□□□ -1.37
NUP49YGL172W ATO2P32907 282 aa6.49□□□□□ -1.37
NUP49YGL172W VPS21P36017 210 aaKnown RBP6.49□□□□□ -1.37
NUP49YGL172W CUE2P36075 443 aaKnown RBP6.49□□□□□ -1.37
NUP49YGL172W EHT1P38295 451 aa6.49□□□□□ -1.37
NUP49YGL172W NAB3P38996 802 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
NUP49YGL172W VRG4P40107 337 aa6.49□□□□□ -1.37
NUP49YGL172W MNT3P40549 630 aa6.49□□□□□ -1.37
NUP49YGL172W CFD1P40558 293 aa6.49□□□□□ -1.37
NUP49YGL172W NAS6P50086 228 aa6.49□□□□□ -1.37
NUP49YGL172W FHN1P53279 174 aa6.49□□□□□ -1.37
NUP49YGL172W NRM1P53718 249 aa6.49□□□□□ -1.37
NUP49YGL172W ESF2P53743 316 aaKnown RBP6.49□□□□□ -1.37
NUP49YGL172W IDP3P53982 420 aaKnown RBP6.49□□□□□ -1.37
NUP49YGL172W CDA1Q06702 301 aa6.49□□□□□ -1.37
NUP49YGL172W GYP1Q08484 637 aa6.49□□□□□ -1.37
NUP49YGL172W YLR125WQ12138 136 aa6.49□□□□□ -1.37
NUP49YGL172W YPR015CQ12531 247 aa6.49□□□□□ -1.37
NUP49YGL172W LAG2Q92325 660 aa6.49□□□□□ -1.37
NUP49YGL172W POL2P21951 2222 aaKnown RBP6.49□□□□□ -1.37
NUP49YGL172W ARD1P07347 238 aaPredicted RBP6.48□□□□□ -1.37
NUP49YGL172W GAL7P08431 366 aa6.48□□□□□ -1.37
NUP49YGL172W MCM1P11746 286 aa6.48□□□□□ -1.37
NUP49YGL172W PDC5P16467 563 aaKnown RBP6.48□□□□□ -1.37
NUP49YGL172W DGR2P32330 852 aa6.48□□□□□ -1.37
NUP49YGL172W HOG1P32485 435 aa6.48□□□□□ -1.37
NUP49YGL172W SFA1P32771 386 aa6.48□□□□□ -1.37
NUP49YGL172W ATG7P38862 630 aa6.48□□□□□ -1.37
NUP49YGL172W MAD2P40958 196 aa6.48□□□□□ -1.37
NUP49YGL172W TMA22P47089 198 aaPredicted RBP6.48□□□□□ -1.37
NUP49YGL172W ECM11Q04110 302 aa6.48□□□□□ -1.37
NUP49YGL172W RRP45Q05636 305 aaKnown RBP6.48□□□□□ -1.37
NUP49YGL172W YPR202WQ08993 238 aa6.48□□□□□ -1.37
NUP49YGL172W NMD4Q12129 218 aa6.48□□□□□ -1.37
NUP49YGL172W YPR022CQ12139 1133 aa6.48□□□□□ -1.37
NUP49YGL172W YLL054CQ12244 843 aa6.48□□□□□ -1.37
NUP49YGL172W SKM1Q12469 655 aa6.48□□□□□ -1.37
NUP49YGL172W GCD2P12754 651 aaPredicted RBP6.47□□□□□ -1.37
NUP49YGL172W SPS22P25380 463 aa6.47□□□□□ -1.37
NUP49YGL172W IDH2P28241 369 aaKnown RBP6.47□□□□□ -1.37
NUP49YGL172W DEP1P31385 405 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms