RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W FAU1P40099 211 aa3.21□□□□□ -1.9
SEC4YFL005W YJL070CP40361 888 aa3.21□□□□□ -1.9
SEC4YFL005W IKS1P47042 667 aa3.21□□□□□ -1.9
SEC4YFL005W YGL138CP53122 345 aa3.21□□□□□ -1.9
SEC4YFL005W NCS2P53923 493 aaPredicted RBP3.21□□□□□ -1.9
SEC4YFL005W SKO1Q02100 647 aa3.21□□□□□ -1.9
SEC4YFL005W HCR1Q05775 265 aaKnown RBP3.21□□□□□ -1.9
SEC4YFL005W YLR345WQ06137 509 aa3.21□□□□□ -1.9
SEC4YFL005W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
SEC4YFL005W HSP42Q12329 375 aa3.21□□□□□ -1.9
SEC4YFL005W RIP1P08067 215 aa3.2□□□□□ -1.9
SEC4YFL005W CLB1P24868 471 aa3.2□□□□□ -1.9
SEC4YFL005W PRP21P32524 280 aaPredicted RBP3.2□□□□□ -1.9
SEC4YFL005W TFB1P32776 642 aa3.2□□□□□ -1.9
SEC4YFL005W NIP100P33420 868 aa3.2□□□□□ -1.9
SEC4YFL005W ARA1P38115 344 aa3.2□□□□□ -1.9
SEC4YFL005W VHC1P38329 1120 aa3.2□□□□□ -1.9
SEC4YFL005W CCT4P39078 528 aaKnown RBP3.2□□□□□ -1.9
SEC4YFL005W ELP2P42935 788 aa3.2□□□□□ -1.9
SEC4YFL005W RLI1Q03195 608 aaKnown RBP3.2□□□□□ -1.9
SEC4YFL005W DAP1Q12091 152 aa3.2□□□□□ -1.9
SEC4YFL005W RKM5Q12367 367 aa3.2□□□□□ -1.9
SEC4YFL005W MRS3P10566 314 aa3.19□□□□□ -1.9
SEC4YFL005W HOM3P10869 527 aa3.19□□□□□ -1.9
SEC4YFL005W SRV2P17555 526 aaKnown RBP3.19□□□□□ -1.9
SEC4YFL005W CPR2P23285 205 aa3.19□□□□□ -1.9
SEC4YFL005W NDC1P32500 655 aa3.19□□□□□ -1.9
SEC4YFL005W PTR2P32901 601 aa3.19□□□□□ -1.9
SEC4YFL005W PEX5P35056 612 aa3.19□□□□□ -1.9
SEC4YFL005W RTT107P38850 1070 aa3.19□□□□□ -1.9
SEC4YFL005W CAK1P43568 368 aaPredicted RBP3.19□□□□□ -1.9
SEC4YFL005W RSC1P53236 928 aa3.19□□□□□ -1.9
SEC4YFL005W OGG1P53397 376 aaPredicted RBP3.19□□□□□ -1.9
SEC4YFL005W HSP31Q04432 237 aa3.19□□□□□ -1.9
SEC4YFL005W MTF1P14908 341 aaKnown RBP3.18□□□□□ -1.9
SEC4YFL005W KRE2P27809 442 aa3.18□□□□□ -1.9
SEC4YFL005W ERV1P27882 189 aa3.18□□□□□ -1.9
SEC4YFL005W RSM22P36056 628 aa3.18□□□□□ -1.9
SEC4YFL005W APE3P37302 537 aaKnown RBP3.18□□□□□ -1.9
SEC4YFL005W CCT2P39076 527 aaKnown RBP3.18□□□□□ -1.9
SEC4YFL005W ZIM17P42844 174 aa3.18□□□□□ -1.9
SEC4YFL005W RTT101P47050 842 aa3.18□□□□□ -1.9
SEC4YFL005W TCB2P48231 1178 aa3.18□□□□□ -1.9
SEC4YFL005W ART5P53244 586 aaKnown RBP3.18□□□□□ -1.9
SEC4YFL005W AIM32Q04689 311 aa3.18□□□□□ -1.9
SEC4YFL005W ERP1Q05359 219 aaKnown RBP3.18□□□□□ -1.9
SEC4YFL005W VAM3Q12241 283 aa3.18□□□□□ -1.9
SEC4YFL005W CYB2P00175 591 aa3.17□□□□□ -1.9
SEC4YFL005W RPL15AP05748 204 aaKnown RBP3.17□□□□□ -1.9
SEC4YFL005W SEC63P14906 663 aa3.17□□□□□ -1.9
SEC4YFL005W GEX1P25596 615 aa3.17□□□□□ -1.9
SEC4YFL005W SIN4P32259 974 aa3.17□□□□□ -1.9
SEC4YFL005W SPC110P32380 944 aa3.17□□□□□ -1.9
SEC4YFL005W HIR2P32480 875 aa3.17□□□□□ -1.9
SEC4YFL005W FRE2P36033 711 aa3.17□□□□□ -1.9
SEC4YFL005W HAT2P39984 401 aa3.17□□□□□ -1.9
SEC4YFL005W SHO1P40073 367 aa3.17□□□□□ -1.9
SEC4YFL005W RPS0BP46654 252 aaKnown RBP3.17□□□□□ -1.9
SEC4YFL005W GWT1P47026 490 aa3.17□□□□□ -1.9
SEC4YFL005W DSL1P53847 754 aa3.17□□□□□ -1.9
SEC4YFL005W KTR5P53966 522 aaPredicted RBP3.17□□□□□ -1.9
SEC4YFL005W VPS9P54787 451 aa3.17□□□□□ -1.9
SEC4YFL005W CIK1Q01649 594 aa3.17□□□□□ -1.9
SEC4YFL005W HOT1Q03213 719 aa3.17□□□□□ -1.9
SEC4YFL005W NDD1Q08887 554 aa3.17□□□□□ -1.9
SEC4YFL005W RKM1Q08961 583 aaPredicted RBP3.17□□□□□ -1.9
SEC4YFL005W YLR278CQ05854 1341 aa3.17□□□□□ -1.9
SEC4YFL005W HIP1P06775 603 aa3.16□□□□□ -1.9
SEC4YFL005W YML002WP0CF17 737 aa3.16□□□□□ -1.9
SEC4YFL005W MDH1P17505 334 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
SEC4YFL005W YCR022CP25620 114 aa3.16□□□□□ -1.9
SEC4YFL005W RRT2P38332 387 aa3.16□□□□□ -1.9
SEC4YFL005W MTC4P38335 694 aaKnown RBP3.16□□□□□ -1.9
SEC4YFL005W RFC3P38629 340 aa3.16□□□□□ -1.9
SEC4YFL005W LRP1P38801 184 aaKnown RBP3.16□□□□□ -1.9
SEC4YFL005W ISC1P40015 477 aaKnown RBP3.16□□□□□ -1.9
SEC4YFL005W YAT2P40017 923 aa3.16□□□□□ -1.9
SEC4YFL005W ALG8P40351 577 aa3.16□□□□□ -1.9
SEC4YFL005W BUD27P43573 796 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
SEC4YFL005W YJR011CP47086 261 aaPredicted RBP3.16□□□□□ -1.9
SEC4YFL005W RPT4P53549 437 aaKnown RBP3.16□□□□□ -1.9
SEC4YFL005W CRZ1P53968 678 aa3.16□□□□□ -1.9
SEC4YFL005W PNG1Q02890 363 aa3.16□□□□□ -1.9
SEC4YFL005W ACL4Q03771 387 aa3.16□□□□□ -1.9
SEC4YFL005W YDR387CQ04162 555 aa3.16□□□□□ -1.9
SEC4YFL005W YMR130WQ04223 302 aa3.16□□□□□ -1.9
SEC4YFL005W MED2Q12124 431 aa3.16□□□□□ -1.9
SEC4YFL005W ATR1P13090 542 aa3.15□□□□□ -1.91
SEC4YFL005W URA4P20051 364 aa3.15□□□□□ -1.91
SEC4YFL005W RHB1P25378 209 aa3.15□□□□□ -1.91
SEC4YFL005W BRF1P29056 596 aa3.15□□□□□ -1.91
SEC4YFL005W BEM1P29366 551 aa3.15□□□□□ -1.91
SEC4YFL005W SLM4P38247 162 aa3.15□□□□□ -1.91
SEC4YFL005W MMS4P38257 691 aa3.15□□□□□ -1.91
SEC4YFL005W DHH1P39517 506 aaKnown RBP3.15□□□□□ -1.91
SEC4YFL005W RPH1P39956 796 aa3.15□□□□□ -1.91
SEC4YFL005W RPR2P40571 144 aa3.15□□□□□ -1.91
SEC4YFL005W SAS2P40963 338 aa3.15□□□□□ -1.91
SEC4YFL005W YFR016CP43597 1233 aaKnown RBP3.15□□□□□ -1.91
SEC4YFL005W YMR317WQ04893 1140 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms