RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	ERP4	Q12450	207 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	AFI1	Q99222	893 aa		4.72	□□□□□ -1.65
LSM6	YDR378C	MRS3	P10566	314 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	PXA2	P34230	853 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	SHO1	P40073	367 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	TFG2	P41896	400 aa	Predicted RBP	4.71	□□□□□ -1.66
LSM6	YDR378C	DSL1	P53847	754 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	BNI5	P53890	448 aa	Known RBP	4.71	□□□□□ -1.66
LSM6	YDR378C	RMT2	Q03305	412 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	DON1	Q05610	365 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	HCR1	Q05775	265 aa	Known RBP	4.71	□□□□□ -1.66
LSM6	YDR378C	HSP42	Q12329	375 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	RKM5	Q12367	367 aa		4.71	□□□□□ -1.66
LSM6	YDR378C	SPC110	P32380	944 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	TFB1	P32776	642 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	NIP100	P33420	868 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	FRE2	P36033	711 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	COS5	P47187	383 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	YGL260W	P53056	76 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	ERB1	Q04660	807 aa	Known RBP	4.7	□□□□□ -1.66
LSM6	YDR378C	YMR317W	Q04893	1140 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	COS7	Q07788	383 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	SMC6	Q12749	1114 aa		4.7	□□□□□ -1.66
LSM6	YDR378C	RPL15A	P05748	204 aa	Known RBP	4.69	□□□□□ -1.66
LSM6	YDR378C	MTC4	P38335	694 aa	Known RBP	4.69	□□□□□ -1.66
LSM6	YDR378C	SRP72	P38688	640 aa	Known RBP	4.69	□□□□□ -1.66
LSM6	YDR378C	ISC1	P40015	477 aa	Known RBP	4.69	□□□□□ -1.66
LSM6	YDR378C	ALG8	P40351	577 aa		4.69	□□□□□ -1.66
LSM6	YDR378C	MEP2	P41948	499 aa		4.69	□□□□□ -1.66
LSM6	YDR378C	GWT1	P47026	490 aa		4.69	□□□□□ -1.66
LSM6	YDR378C	SKO1	Q02100	647 aa		4.69	□□□□□ -1.66
LSM6	YDR378C	HSP31	Q04432	237 aa		4.69	□□□□□ -1.66
LSM6	YDR378C	ERP1	Q05359	219 aa	Known RBP	4.69	□□□□□ -1.66
LSM6	YDR378C	SET6	Q12529	373 aa		4.69	□□□□□ -1.66
LSM6	YDR378C	RIP1	P08067	215 aa		4.68	□□□□□ -1.66
LSM6	YDR378C	RPL20A	P0CX23	172 aa	Known RBP	4.68	□□□□□ -1.66
LSM6	YDR378C	RPL20B	P0CX24	172 aa	Predicted RBP	4.68	□□□□□ -1.66
LSM6	YDR378C	PRP21	P32524	280 aa	Predicted RBP	4.68	□□□□□ -1.66
LSM6	YDR378C	VMA8	P32610	256 aa	Known RBP	4.68	□□□□□ -1.66
LSM6	YDR378C	APE3	P37302	537 aa	Known RBP	4.68	□□□□□ -1.66
LSM6	YDR378C	MDM31	P38880	579 aa		4.68	□□□□□ -1.66
LSM6	YDR378C	YFR016C	P43597	1233 aa	Known RBP	4.68	□□□□□ -1.66
LSM6	YDR378C	OGG1	P53397	376 aa	Predicted RBP	4.68	□□□□□ -1.66
LSM6	YDR378C	RRD2	Q12461	358 aa		4.68	□□□□□ -1.66
LSM6	YDR378C	YAR066W	P0CX18	203 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	YHR214W	P0CX19	203 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	CLB1	P24868	471 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	YCR022C	P25620	114 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	URA7	P28274	579 aa	Known RBP	4.67	□□□□□ -1.66
LSM6	YDR378C	RPH1	P39956	796 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	HAT2	P39984	401 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	RPS0B	P46654	252 aa	Known RBP	4.67	□□□□□ -1.66
LSM6	YDR378C	SCS3	P53012	380 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	ART5	P53244	586 aa	Known RBP	4.67	□□□□□ -1.66
LSM6	YDR378C	PNG1	Q02890	363 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	AYT1	Q12226	474 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	VAM3	Q12241	283 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	ISN1	Q99312	450 aa		4.67	□□□□□ -1.66
LSM6	YDR378C	ATR1	P13090	542 aa		4.66	□□□□□ -1.66
LSM6	YDR378C	PMU1	P36069	295 aa		4.66	□□□□□ -1.66
LSM6	YDR378C	DHH1	P39517	506 aa	Known RBP	4.66	□□□□□ -1.66
LSM6	YDR378C	RPR2	P40571	144 aa		4.66	□□□□□ -1.66
LSM6	YDR378C	ZIM17	P42844	174 aa		4.66	□□□□□ -1.66
LSM6	YDR378C	CAK1	P43568	368 aa	Predicted RBP	4.66	□□□□□ -1.66
LSM6	YDR378C	YIF1	P53845	314 aa	Known RBP	4.66	□□□□□ -1.66
LSM6	YDR378C	YDR387C	Q04162	555 aa		4.66	□□□□□ -1.66
LSM6	YDR378C	YLR278C	Q05854	1341 aa		4.66	□□□□□ -1.66
LSM6	YDR378C	SNT1	P25357	1226 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	YCR100C	P25606	316 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	ERV1	P27882	189 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	CRM1	P30822	1084 aa	Known RBP	4.65	□□□□□ -1.67
LSM6	YDR378C	ATS1	P31386	333 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	NDI1	P32340	513 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	APE2	P32454	952 aa	Known RBP	4.65	□□□□□ -1.67
LSM6	YDR378C	FMP46	P36141	133 aa	Known RBP	4.65	□□□□□ -1.67
LSM6	YDR378C	PIM1	P36775	1133 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	MMS4	P38257	691 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	CCT2	P39076	527 aa	Known RBP	4.65	□□□□□ -1.67
LSM6	YDR378C	YML6	P51998	286 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	PCP1	P53259	346 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	PPT2	Q12036	173 aa		4.65	□□□□□ -1.67
LSM6	YDR378C	RPI1	P23250	407 aa	Known RBP	4.64	□□□□□ -1.67
LSM6	YDR378C	KRE2	P27809	442 aa		4.64	□□□□□ -1.67
LSM6	YDR378C	HIR2	P32480	875 aa		4.64	□□□□□ -1.67
LSM6	YDR378C	YJL213W	P40896	331 aa		4.64	□□□□□ -1.67
LSM6	YDR378C	ECM27	P47144	725 aa		4.64	□□□□□ -1.67
LSM6	YDR378C	KTR5	P53966	522 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM6	YDR378C	HOT1	Q03213	719 aa		4.64	□□□□□ -1.67
LSM6	YDR378C	AIM32	Q04689	311 aa		4.64	□□□□□ -1.67
LSM6	YDR378C	YLR345W	Q06137	509 aa		4.64	□□□□□ -1.67
LSM6	YDR378C	HIS4	P00815	799 aa	Known RBP	4.63	□□□□□ -1.67
LSM6	YDR378C	GDH1	P07262	454 aa	Known RBP	4.63	□□□□□ -1.67
LSM6	YDR378C	URA4	P20051	364 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	MCK1	P21965	375 aa	Known RBP	4.63	□□□□□ -1.67
LSM6	YDR378C	CPR2	P23285	205 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	RHB1	P25378	209 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	YUR1	P26725	428 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	BRF1	P29056	596 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	BEM1	P29366	551 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	SIN4	P32259	974 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms