RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W UPF3P48412 387 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W MRX6P48564 524 aa0.93□□□□□ -2.26
BFR2YDR299W LYS4P49367 693 aaPredicted RBP0.93□□□□□ -2.26
BFR2YDR299W IMD4P50094 524 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W OCA1P50946 238 aaPredicted RBP0.93□□□□□ -2.26
BFR2YDR299W DSL1P53847 754 aa0.93□□□□□ -2.26
BFR2YDR299W IPI3P53877 555 aa0.93□□□□□ -2.26
BFR2YDR299W ODC1Q03028 310 aa0.93□□□□□ -2.26
BFR2YDR299W PDS5Q04264 1277 aa0.93□□□□□ -2.26
BFR2YDR299W VIP1Q06685 1146 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W YDL057WQ07379 328 aa0.93□□□□□ -2.26
BFR2YDR299W SYO1Q07395 620 aa0.93□□□□□ -2.26
BFR2YDR299W KEL3Q08979 651 aaPredicted RBP0.93□□□□□ -2.26
BFR2YDR299W YDR056CQ12025 205 aa0.93□□□□□ -2.26
BFR2YDR299W NCE102Q12207 173 aaRIP-Chip data0.93□□□□□ -2.26not detected
BFR2YDR299W RLM1Q12224 676 aa0.93□□□□□ -2.26
BFR2YDR299W MED1Q12321 566 aa0.93□□□□□ -2.26
BFR2YDR299W SCM3Q12334 223 aa0.93□□□□□ -2.26
BFR2YDR299W YER078W-AQ3E7A2 54 aa0.93□□□□□ -2.26
BFR2YDR299W ARG4P04076 463 aaPredicted RBP0.93□□□□□ -2.26
BFR2YDR299W GAL80P04387 435 aa0.93□□□□□ -2.26
BFR2YDR299W RAD52P06778 471 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W CPR1P14832 162 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W AAC3P18238 307 aa0.93□□□□□ -2.26
BFR2YDR299W KGD1P20967 1014 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W NDI1P32340 513 aa0.93□□□□□ -2.26
BFR2YDR299W FRE1P32791 686 aa0.93□□□□□ -2.26
BFR2YDR299W NFU1P32860 256 aa0.93□□□□□ -2.26
BFR2YDR299W HCS1P34243 683 aa0.93□□□□□ -2.26
BFR2YDR299W PIM1P36775 1133 aa0.93□□□□□ -2.26
BFR2YDR299W RFS1P38234 210 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W NTC20P38302 140 aaPredicted RBP0.93□□□□□ -2.26
BFR2YDR299W YHR054CP38780 354 aa0.93□□□□□ -2.26
BFR2YDR299W MBB1P39534 108 aa0.93□□□□□ -2.26
BFR2YDR299W HAT2P39984 401 aa0.93□□□□□ -2.26
BFR2YDR299W MET18P40469 1032 aa0.93□□□□□ -2.26
BFR2YDR299W SIM1P40472 476 aa0.93□□□□□ -2.26
BFR2YDR299W POP1P41812 875 aa0.93□□□□□ -2.26
BFR2YDR299W YGR210CP42942 411 aa0.93□□□□□ -2.26
BFR2YDR299W GWT1P47026 490 aa0.93□□□□□ -2.26
BFR2YDR299W PET130P47065 347 aa0.93□□□□□ -2.26
BFR2YDR299W ZPR1P53303 486 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W ALF1P53904 254 aa0.93□□□□□ -2.26
BFR2YDR299W SLG1P54867 378 aa0.93□□□□□ -2.26
BFR2YDR299W RLI1Q03195 608 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W NGL3Q03210 505 aa0.93□□□□□ -2.26
BFR2YDR299W YMR181CQ03231 154 aa0.93□□□□□ -2.26
BFR2YDR299W HER2Q03557 464 aa0.93□□□□□ -2.26
BFR2YDR299W YDR239CQ03780 787 aa0.93□□□□□ -2.26
BFR2YDR299W HSP31Q04432 237 aa0.93□□□□□ -2.26
BFR2YDR299W RRP45Q05636 305 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W MRD1Q06106 887 aaKnown RBP0.93□□□□□ -2.26
BFR2YDR299W PHO92Q06390 306 aa0.93□□□□□ -2.26
BFR2YDR299W NDE2Q07500 545 aa0.93□□□□□ -2.26
BFR2YDR299W REX4Q08237 289 aa0.93□□□□□ -2.26
BFR2YDR299W ESA1Q08649 445 aa0.93□□□□□ -2.26
BFR2YDR299W CFT2Q12102 859 aaPredicted RBP0.93□□□□□ -2.26
BFR2YDR299W YLR108CQ12259 485 aa0.93□□□□□ -2.26
BFR2YDR299W CEX1Q12453 761 aa0.93□□□□□ -2.26
BFR2YDR299W YML133CQ03099 1374 aa0.92□□□□□ -2.26
BFR2YDR299W YLL067CQ07888 1374 aa0.92□□□□□ -2.26
BFR2YDR299W YLL066CQ99208 1374 aa0.92□□□□□ -2.26
BFR2YDR299W CDC31P06704 161 aaKnown RBP0.92□□□□□ -2.26
BFR2YDR299W HIP1P06775 603 aa0.92□□□□□ -2.26
BFR2YDR299W MRP13P12686 339 aa0.92□□□□□ -2.26
BFR2YDR299W CKA1P15790 372 aa0.92□□□□□ -2.26
BFR2YDR299W HEM15P16622 393 aa0.92□□□□□ -2.26
BFR2YDR299W SPB1P25582 841 aaPredicted RBP0.92□□□□□ -2.26
BFR2YDR299W BUB3P26449 341 aa0.92□□□□□ -2.26
BFR2YDR299W SPR1P32603 445 aa0.92□□□□□ -2.26
BFR2YDR299W MRP4P32902 394 aa0.92□□□□□ -2.26
BFR2YDR299W NIP100P33420 868 aa0.92□□□□□ -2.26
BFR2YDR299W STB6P36085 766 aa0.92□□□□□ -2.26
BFR2YDR299W ARA1P38115 344 aa0.92□□□□□ -2.26
BFR2YDR299W PCF11P39081 626 aaPredicted RBP0.92□□□□□ -2.26
BFR2YDR299W SPO22P40511 975 aa0.92□□□□□ -2.26
BFR2YDR299W TFG2P41896 400 aaPredicted RBP0.92□□□□□ -2.26
BFR2YDR299W LAM5P43560 674 aa0.92□□□□□ -2.26
BFR2YDR299W DLD2P46681 530 aaKnown RBP0.92□□□□□ -2.26
BFR2YDR299W AIM22P47051 409 aa0.92□□□□□ -2.26
BFR2YDR299W YGL108CP53139 140 aa0.92□□□□□ -2.26
BFR2YDR299W MNP1P53163 194 aaPredicted RBP0.92□□□□□ -2.26
BFR2YDR299W JJJ1P53863 590 aa0.92□□□□□ -2.26
BFR2YDR299W YLR152CP54072 576 aa0.92□□□□□ -2.26
BFR2YDR299W SVL3Q03088 825 aaKnown RBP0.92□□□□□ -2.26
BFR2YDR299W TAF12Q03761 539 aa0.92□□□□□ -2.26
BFR2YDR299W COG4Q06096 861 aa0.92□□□□□ -2.26
BFR2YDR299W YPL199CQ08954 240 aa0.92□□□□□ -2.26
BFR2YDR299W BUG1Q12191 341 aa0.92□□□□□ -2.26
BFR2YDR299W PKH2Q12236 1081 aaKnown RBP0.92□□□□□ -2.26
BFR2YDR299W RUP1Q12242 671 aa0.92□□□□□ -2.26
BFR2YDR299W SNU66Q12420 587 aaPredicted RBP0.92□□□□□ -2.26
BFR2YDR299W CTF3Q12748 733 aa0.92□□□□□ -2.26
BFR2YDR299W INH1P01097 85 aa0.91□□□□□ -2.26
BFR2YDR299W CLN3P13365 580 aa0.91□□□□□ -2.26
BFR2YDR299W RED1P14291 827 aa0.91□□□□□ -2.26
BFR2YDR299W SRV2P17555 526 aaKnown RBP0.91□□□□□ -2.26
BFR2YDR299W ISY1P21374 235 aaPredicted RBP0.91□□□□□ -2.26
BFR2YDR299W SGV1P23293 657 aaKnown RBP0.91□□□□□ -2.26
BFR2YDR299W YCR100CP25606 316 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms