RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C CAD1P24813 409 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C PET18P25362 215 aa1.06□□□□□ -2.24
VAM6YDL077C BOS1P25385 244 aa1.06□□□□□ -2.24
VAM6YDL077C YUR1P26725 428 aa1.06□□□□□ -2.24
VAM6YDL077C CIN8P27895 1000 aa1.06□□□□□ -2.24
VAM6YDL077C IDH1P28834 360 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
VAM6YDL077C CCR4P31384 837 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C RIM1P32445 135 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C HXT3P32466 567 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C PRP21P32524 280 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C SIP1P32578 815 aa1.06□□□□□ -2.24
VAM6YDL077C RML2P32611 393 aa1.06□□□□□ -2.24
VAM6YDL077C ISC10P32645 267 aa1.06□□□□□ -2.24
VAM6YDL077C TFB1P32776 642 aa1.06□□□□□ -2.24
VAM6YDL077C MRPL6P32904 214 aa1.06□□□□□ -2.24
VAM6YDL077C MNS1P32906 549 aa1.06□□□□□ -2.24
VAM6YDL077C KTR2P33550 425 aa1.06□□□□□ -2.24
VAM6YDL077C MOT2P34909 587 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C PTC1P35182 281 aa1.06□□□□□ -2.24
VAM6YDL077C CTF13P35203 478 aa1.06□□□□□ -2.24
VAM6YDL077C YET1P35723 206 aa1.06□□□□□ -2.24
VAM6YDL077C OAR1P35731 278 aa1.06□□□□□ -2.24
VAM6YDL077C FRE2P36033 711 aa1.06□□□□□ -2.24
VAM6YDL077C PMU1P36069 295 aa1.06□□□□□ -2.24
VAM6YDL077C TFA2P36145 328 aa1.06□□□□□ -2.24
VAM6YDL077C GPT2P36148 743 aa1.06□□□□□ -2.24
VAM6YDL077C SHM2P37291 469 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C ECM13P38195 257 aa1.06□□□□□ -2.24
VAM6YDL077C CCZ1P38273 704 aa1.06□□□□□ -2.24
VAM6YDL077C COS111P38308 924 aa1.06□□□□□ -2.24
VAM6YDL077C BSD2P38356 321 aa1.06□□□□□ -2.24
VAM6YDL077C YPT31P38555 223 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C DED81P38707 554 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C ARN1P38731 627 aa1.06□□□□□ -2.24
VAM6YDL077C LNP1P38878 278 aa1.06□□□□□ -2.24
VAM6YDL077C YHR219WP38900 624 aa1.06□□□□□ -2.24
VAM6YDL077C YJL206CP39529 758 aa1.06□□□□□ -2.24
VAM6YDL077C PRP39P39682 629 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C RPN3P40016 523 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C YMR144WP40214 342 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C PGD1P40356 397 aa1.06□□□□□ -2.24
VAM6YDL077C YIL108WP40483 696 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C CFD1P40558 293 aa1.06□□□□□ -2.24
VAM6YDL077C YNL320WP42840 284 aa1.06□□□□□ -2.24
VAM6YDL077C PMT4P46971 762 aa1.06□□□□□ -2.24
VAM6YDL077C RTT101P47050 842 aa1.06□□□□□ -2.24
VAM6YDL077C GCV1P48015 400 aa1.06□□□□□ -2.24
VAM6YDL077C HLJ1P48353 224 aa1.06□□□□□ -2.24
VAM6YDL077C RPL4BP49626 362 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C AZR1P50080 613 aa1.06□□□□□ -2.24
VAM6YDL077C RMR1P53060 241 aa1.06□□□□□ -2.24
VAM6YDL077C COG1P53079 417 aa1.06□□□□□ -2.24
VAM6YDL077C NSA1P53136 463 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C MRH4P53166 561 aa1.06□□□□□ -2.24
VAM6YDL077C VOA1P53262 265 aa1.06□□□□□ -2.24
VAM6YDL077C NOP19P53317 196 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C TNA1P53322 534 aa1.06□□□□□ -2.24
VAM6YDL077C ZRG17P53735 605 aa1.06□□□□□ -2.24
VAM6YDL077C CAF40P53829 373 aa1.06□□□□□ -2.24
VAM6YDL077C YNL146WP53906 100 aa1.06□□□□□ -2.24
VAM6YDL077C PEX13P80667 386 aa1.06□□□□□ -2.24
VAM6YDL077C SDH1Q00711 640 aa1.06□□□□□ -2.24
VAM6YDL077C OSH6Q02201 448 aa1.06□□□□□ -2.24
VAM6YDL077C YPL107WQ02873 248 aa1.06□□□□□ -2.24
VAM6YDL077C MRPS17Q03246 237 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C SND1Q04007 877 aa1.06□□□□□ -2.24
VAM6YDL077C SPO20Q04359 397 aa1.06□□□□□ -2.24
VAM6YDL077C PEX12Q04370 399 aa1.06□□□□□ -2.24
VAM6YDL077C GSF2Q04697 403 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C ECM38Q05902 660 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C ADY4Q05955 493 aa1.06□□□□□ -2.24
VAM6YDL077C ECM22Q05958 814 aaPredicted RBP1.06□□□□□ -2.24
VAM6YDL077C FAR10Q06001 478 aa1.06□□□□□ -2.24
VAM6YDL077C NEJ1Q06148 342 aa1.06□□□□□ -2.24
VAM6YDL077C YPR078CQ06813 372 aa1.06□□□□□ -2.24
VAM6YDL077C SDO1Q07953 250 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C HRK1Q08732 759 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C TCO89Q08921 799 aa1.06□□□□□ -2.24
VAM6YDL077C GET3Q12154 354 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C RGT2Q12300 763 aa1.06□□□□□ -2.24
VAM6YDL077C HMS1Q12398 434 aa1.06□□□□□ -2.24
VAM6YDL077C YOP1Q12402 180 aa1.06□□□□□ -2.24
VAM6YDL077C LPX1Q12405 387 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C WHI5Q12416 295 aa1.06□□□□□ -2.24
VAM6YDL077C TRM11Q12463 433 aa1.06□□□□□ -2.24
VAM6YDL077C SNF8Q12483 233 aa1.06□□□□□ -2.24
VAM6YDL077C PSF1Q12488 208 aa1.06□□□□□ -2.24
VAM6YDL077C FMP16Q12497 93 aa1.06□□□□□ -2.24
VAM6YDL077C EFG1Q3E705 233 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C YDL085C-AQ3E7B7 68 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C YCL001W-BQ96VH2 84 aa1.06□□□□□ -2.24
VAM6YDL077C MPD2Q99316 277 aa1.06□□□□□ -2.24
VAM6YDL077C RPN13O13563 156 aa1.06□□□□□ -2.24
VAM6YDL077C YBR085C-AO43137 85 aa1.06□□□□□ -2.24
VAM6YDL077C MRP10O75012 95 aa1.06□□□□□ -2.24
VAM6YDL077C RPS17AP02407 136 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C SPS2P08459 502 aa1.06□□□□□ -2.24
VAM6YDL077C MSS18P08593 268 aa1.06□□□□□ -2.24
VAM6YDL077C RPS17BP14127 136 aaKnown RBP1.06□□□□□ -2.24
VAM6YDL077C RPL8AP17076 256 aaKnown RBP1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms