RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 GPI18P38211 433 aa-0.46□□□□□ -2.48
snR47snR47 OM14P38325 134 aa-0.46□□□□□ -2.48
snR47snR47 STP2P38704 541 aa-0.46□□□□□ -2.48
snR47snR47 CHL4P38907 458 aa-0.46□□□□□ -2.48
snR47snR47 HST4P53688 370 aa-0.46□□□□□ -2.48
snR47snR47 ZRG17P53735 605 aa-0.46□□□□□ -2.48
snR47snR47 TY2A-DR2Q03483 438 aa-0.46□□□□□ -2.48
snR47snR47 PDS5Q04264 1277 aa-0.46□□□□□ -2.48
snR47snR47 FAR10Q06001 478 aa-0.46□□□□□ -2.48
snR47snR47 MCH1Q07376 486 aa-0.46□□□□□ -2.48
snR47snR47 BRE1Q07457 700 aaKnown RBP-0.46□□□□□ -2.48
snR47snR47 YOR365CQ08844 703 aa-0.46□□□□□ -2.48
snR47snR47 TY2A-BQ12260 438 aa-0.46□□□□□ -2.48
snR47snR47 TY2A-OR2Q12293 438 aa-0.46□□□□□ -2.48
snR47snR47 TY2A-DR1Q12392 438 aa-0.46□□□□□ -2.48
snR47snR47 TY2A-OR1Q12439 438 aa-0.46□□□□□ -2.48
snR47snR47 YOR019WQ99248 730 aa-0.46□□□□□ -2.48
snR47snR47 TY2A-DR3Q99303 438 aa-0.46□□□□□ -2.48
snR47snR47 RAD61Q99359 647 aa-0.46□□□□□ -2.48
snR47snR47 SKN1P33336 771 aa-0.47□□□□□ -2.48
snR47snR47 YBL081WP38180 368 aaKnown RBP-0.47□□□□□ -2.48
snR47snR47 UPF3P48412 387 aaKnown RBP-0.47□□□□□ -2.48
snR47snR47 NUP57P48837 541 aa-0.47□□□□□ -2.48
snR47snR47 OCA1P50946 238 aaPredicted RBP-0.47□□□□□ -2.48
snR47snR47 GPI1P53306 609 aa-0.47□□□□□ -2.48
snR47snR47 DUG3P53871 357 aa-0.47□□□□□ -2.48
snR47snR47 KTR6P54070 446 aa-0.47□□□□□ -2.48
snR47snR47 NUP116Q02630 1113 aa-0.47□□□□□ -2.48
snR47snR47 ODC1Q03028 310 aa-0.47□□□□□ -2.48
snR47snR47 LIP2Q06005 328 aa-0.47□□□□□ -2.48
snR47snR47 VIP1Q06685 1146 aaKnown RBP-0.47□□□□□ -2.48
snR47snR47 NUR1Q12066 484 aa-0.47□□□□□ -2.48
snR47snR47 NCE102Q12207 173 aaRIP-Chip data-0.47□□□□□ -2.48not detected
snR47snR47 BUD5P25300 642 aaPredicted RBP-0.48□□□□□ -2.49
snR47snR47 APE2P32454 952 aaKnown RBP-0.48□□□□□ -2.49
snR47snR47 RML2P32611 393 aa-0.48□□□□□ -2.49
snR47snR47 FRE2P36033 711 aa-0.48□□□□□ -2.49
snR47snR47 RIB5P38145 238 aa-0.48□□□□□ -2.49
snR47snR47 DIA4P38705 446 aaPredicted RBP-0.48□□□□□ -2.49
snR47snR47 FSH1P38777 243 aaKnown RBP-0.48□□□□□ -2.49
snR47snR47 BAT1P38891 393 aaKnown RBP-0.48□□□□□ -2.49
snR47snR47 YHR210CP38893 341 aa-0.48□□□□□ -2.49
snR47snR47 PSD1P39006 500 aa-0.48□□□□□ -2.49
snR47snR47 PCF11P39081 626 aaPredicted RBP-0.48□□□□□ -2.49
snR47snR47 VPS27P40343 622 aaKnown RBP-0.48□□□□□ -2.49
snR47snR47 NNF1P47149 201 aa-0.48□□□□□ -2.49
snR47snR47 EIS1Q05050 843 aaKnown RBP-0.48□□□□□ -2.49
snR47snR47 RBS1Q05672 457 aaKnown RBP-0.48□□□□□ -2.49
snR47snR47 ECM30Q06673 1274 aa-0.48□□□□□ -2.49
snR47snR47 JID1Q12350 301 aa-0.48□□□□□ -2.49
snR47snR47 RAD52P06778 471 aaKnown RBP-0.49□□□□□ -2.49
snR47snR47 SAM1P10659 382 aaKnown RBP-0.49□□□□□ -2.49
snR47snR47 DAL5P15365 543 aa-0.49□□□□□ -2.49
snR47snR47 SAM2P19358 384 aaKnown RBP-0.49□□□□□ -2.49
snR47snR47 MFT1P33441 392 aaKnown RBP-0.49□□□□□ -2.49
snR47snR47 YBR137WP38276 179 aa-0.49□□□□□ -2.49
snR47snR47 PFS1P38872 237 aa-0.49□□□□□ -2.49
snR47snR47 MST28P39552 234 aa-0.49□□□□□ -2.49
snR47snR47 SAW1P39735 261 aa-0.49□□□□□ -2.49
snR47snR47 MRP51Q02950 344 aa-0.49□□□□□ -2.49
snR47snR47 TRS130Q03660 1102 aa-0.49□□□□□ -2.49
snR47snR47 THP1Q08231 455 aa-0.49□□□□□ -2.49
snR47snR47 RPS19AP07280 144 aaKnown RBP-0.5□□□□□ -2.49
snR47snR47 RPS19BP07281 144 aaPredicted RBP-0.5□□□□□ -2.49
snR47snR47 NCP1P16603 691 aaKnown RBP-0.5□□□□□ -2.49
snR47snR47 GLK1P17709 500 aaKnown RBP-0.5□□□□□ -2.49
snR47snR47 SWI4P25302 1093 aaKnown RBP-0.5□□□□□ -2.49
snR47snR47 HIR2P32480 875 aa-0.5□□□□□ -2.49
snR47snR47 ALK2P32789 676 aaPredicted RBP-0.5□□□□□ -2.49
snR47snR47 YBL055CP34220 418 aaPredicted RBP-0.5□□□□□ -2.49
snR47snR47 YKL100CP34248 587 aa-0.5□□□□□ -2.49
snR47snR47 RSM22P36056 628 aa-0.5□□□□□ -2.49
snR47snR47 ASP1P38986 381 aaPredicted RBP-0.5□□□□□ -2.49
snR47snR47 OXA1P39952 402 aa-0.5□□□□□ -2.49
snR47snR47 COS4P43542 379 aa-0.5□□□□□ -2.49
snR47snR47 ASE1P50275 885 aa-0.5□□□□□ -2.49
snR47snR47 DSD1P53095 428 aa-0.5□□□□□ -2.49
snR47snR47 YNR061CP53747 219 aa-0.5□□□□□ -2.49
snR47snR47 CSL4P53859 292 aaPredicted RBP-0.5□□□□□ -2.49
snR47snR47 MIX17Q03667 156 aa-0.5□□□□□ -2.49
snR47snR47 MRD1Q06106 887 aaKnown RBP-0.5□□□□□ -2.49
snR47snR47 IWR1Q07532 353 aaPredicted RBP-0.5□□□□□ -2.49
snR47snR47 ARP7Q12406 477 aa-0.5□□□□□ -2.49
snR47snR47 FOL3Q12676 427 aaPredicted RBP-0.5□□□□□ -2.49
snR47snR47 YOR338WQ99326 363 aa-0.5□□□□□ -2.49
snR47snR47 ADR1P07248 1323 aa-0.5□□□□□ -2.49
snR47snR47 ATP2P00830 511 aaKnown RBP-0.51□□□□□ -2.49
snR47snR47 TFS1P14306 219 aa-0.51□□□□□ -2.49
snR47snR47 ELO2P25358 347 aa-0.51□□□□□ -2.49
snR47snR47 CDC50P25656 391 aa-0.51□□□□□ -2.49
snR47snR47 BUB3P26449 341 aa-0.51□□□□□ -2.49
snR47snR47 PRR1P28708 518 aa-0.51□□□□□ -2.49
snR47snR47 CNM67P53865 581 aaKnown RBP-0.51□□□□□ -2.49
snR47snR47 MSC1Q03104 513 aa-0.51□□□□□ -2.49
snR47snR47 PPM1Q04081 328 aa-0.51□□□□□ -2.49
snR47snR47 YET2Q04210 160 aa-0.51□□□□□ -2.49
snR47snR47 MYO5Q04439 1219 aaKnown RBP-0.51□□□□□ -2.49
snR47snR47 FRE8Q12209 686 aa-0.51□□□□□ -2.49
snR47snR47 RPB2P08518 1224 aaKnown RBP-0.52□□□□□ -2.49
snR47snR47 CDC15P27636 974 aa-0.52□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms