RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W SUC2P00724 532 aa3.6□□□□□ -1.83
TRM112YNR046W RPL42AP0CX27 106 aaKnown RBP3.6□□□□□ -1.83
TRM112YNR046W RPL42BP0CX28 106 aaKnown RBP3.6□□□□□ -1.83
TRM112YNR046W APE1P14904 514 aa3.6□□□□□ -1.83
TRM112YNR046W UTR4P32626 227 aa3.6□□□□□ -1.83
TRM112YNR046W ECM32P32644 1121 aaKnown RBP3.6□□□□□ -1.83
TRM112YNR046W VPS17P32913 551 aa3.6□□□□□ -1.83
TRM112YNR046W PIM1P36775 1133 aa3.6□□□□□ -1.83
TRM112YNR046W VHC1P38329 1120 aa3.6□□□□□ -1.83
TRM112YNR046W GDI1P39958 451 aaKnown RBP3.6□□□□□ -1.83
TRM112YNR046W CSM2P40465 213 aa3.6□□□□□ -1.83
TRM112YNR046W VMA13P41807 478 aaKnown RBP3.6□□□□□ -1.83
TRM112YNR046W FET5P43561 622 aa3.6□□□□□ -1.83
TRM112YNR046W YJL055WP47044 245 aa3.6□□□□□ -1.83
TRM112YNR046W TCB2P48231 1178 aa3.6□□□□□ -1.83
TRM112YNR046W DRN1P53255 507 aaKnown RBP3.6□□□□□ -1.83
TRM112YNR046W SMA1Q02651 245 aa3.6□□□□□ -1.83
TRM112YNR046W OAZ1Q02803 292 aa3.6□□□□□ -1.83
TRM112YNR046W MSS11Q03825 758 aa3.6□□□□□ -1.83
TRM112YNR046W GYL1Q04322 720 aa3.6□□□□□ -1.83
TRM112YNR046W YMR254CQ04838 102 aa3.6□□□□□ -1.83
TRM112YNR046W IVY1Q04934 453 aa3.6□□□□□ -1.83
TRM112YNR046W MED2Q12124 431 aa3.6□□□□□ -1.83
TRM112YNR046W PDH1Q12428 516 aaKnown RBP3.6□□□□□ -1.83
TRM112YNR046W CTF3Q12748 733 aa3.6□□□□□ -1.83
TRM112YNR046W HIP1P06775 603 aa3.59□□□□□ -1.83
TRM112YNR046W BAR1P12630 587 aa3.59□□□□□ -1.83
TRM112YNR046W EXO70P19658 623 aa3.59□□□□□ -1.83
TRM112YNR046W HNM1P19807 563 aa3.59□□□□□ -1.83
TRM112YNR046W YCP4P25349 247 aaKnown RBP3.59□□□□□ -1.83
TRM112YNR046W SNT1P25357 1226 aa3.59□□□□□ -1.83
TRM112YNR046W FUN19P28003 413 aaPredicted RBP3.59□□□□□ -1.83
TRM112YNR046W MDL1P33310 695 aa3.59□□□□□ -1.83
TRM112YNR046W SPC34P36131 295 aa3.59□□□□□ -1.83
TRM112YNR046W GND1P38720 489 aaKnown RBP3.59□□□□□ -1.83
TRM112YNR046W YTA12P40341 825 aa3.59□□□□□ -1.83
TRM112YNR046W CUL3P53202 744 aa3.59□□□□□ -1.83
TRM112YNR046W YGR111WP53265 400 aa3.59□□□□□ -1.83
TRM112YNR046W GPI1P53306 609 aa3.59□□□□□ -1.83
TRM112YNR046W BET4Q00618 327 aa3.59□□□□□ -1.83
TRM112YNR046W YDR415CQ04033 374 aaPredicted RBP3.59□□□□□ -1.83
TRM112YNR046W YLR281CQ05863 155 aa3.59□□□□□ -1.83
TRM112YNR046W YEH2Q07950 538 aa3.59□□□□□ -1.83
TRM112YNR046W VPS54Q12071 889 aa3.59□□□□□ -1.83
TRM112YNR046W PAR32Q12515 295 aaKnown RBP3.59□□□□□ -1.83
TRM112YNR046W LEU4P06208 619 aaKnown RBP3.58□□□□□ -1.84
TRM112YNR046W GLK1P17709 500 aaKnown RBP3.58□□□□□ -1.84
TRM112YNR046W ATP10P18496 279 aa3.58□□□□□ -1.84
TRM112YNR046W SEC62P21825 274 aa3.58□□□□□ -1.84
TRM112YNR046W SGV1P23293 657 aaKnown RBP3.58□□□□□ -1.84
TRM112YNR046W YCR007CP25354 239 aa3.58□□□□□ -1.84
TRM112YNR046W RPS2P25443 254 aaKnown RBP3.58□□□□□ -1.84
TRM112YNR046W MGR1P25573 417 aa3.58□□□□□ -1.84
TRM112YNR046W BRF1P29056 596 aa3.58□□□□□ -1.84
TRM112YNR046W RPN2P32565 945 aaKnown RBP3.58□□□□□ -1.84
TRM112YNR046W ASK1P35734 292 aa3.58□□□□□ -1.84
TRM112YNR046W THI2P38141 450 aa3.58□□□□□ -1.84
TRM112YNR046W SLM4P38247 162 aa3.58□□□□□ -1.84
TRM112YNR046W MMS4P38257 691 aa3.58□□□□□ -1.84
TRM112YNR046W RRT2P38332 387 aa3.58□□□□□ -1.84
TRM112YNR046W TFG2P41896 400 aaPredicted RBP3.58□□□□□ -1.84
TRM112YNR046W RPT4P53549 437 aaKnown RBP3.58□□□□□ -1.84
TRM112YNR046W TDA7P53882 636 aaPredicted RBP3.58□□□□□ -1.84
TRM112YNR046W NCS2P53923 493 aaPredicted RBP3.58□□□□□ -1.84
TRM112YNR046W YMR130WQ04223 302 aa3.58□□□□□ -1.84
TRM112YNR046W PHO92Q06390 306 aa3.58□□□□□ -1.84
TRM112YNR046W THI20Q08224 551 aa3.58□□□□□ -1.84
TRM112YNR046W LSP1Q12230 341 aaKnown RBP3.58□□□□□ -1.84
TRM112YNR046W VAM3Q12241 283 aa3.58□□□□□ -1.84
TRM112YNR046W GPM3Q12326 303 aa3.58□□□□□ -1.84
TRM112YNR046W MES1P00958 751 aaKnown RBP3.57□□□□□ -1.84
TRM112YNR046W YPT1P01123 206 aaKnown RBP3.57□□□□□ -1.84
TRM112YNR046W URA4P20051 364 aa3.57□□□□□ -1.84
TRM112YNR046W OPI1P21957 404 aa3.57□□□□□ -1.84
TRM112YNR046W ACH1P32316 526 aa3.57□□□□□ -1.84
TRM112YNR046W ATP11P32453 318 aa3.57□□□□□ -1.84
TRM112YNR046W RAD24P32641 659 aa3.57□□□□□ -1.84
TRM112YNR046W LTV1P34078 463 aa3.57□□□□□ -1.84
TRM112YNR046W OSH3P38713 996 aaKnown RBP3.57□□□□□ -1.84
TRM112YNR046W LCB2P40970 561 aa3.57□□□□□ -1.84
TRM112YNR046W SCW4P53334 386 aaKnown RBP3.57□□□□□ -1.84
TRM112YNR046W SLD5Q03406 294 aa3.57□□□□□ -1.84
TRM112YNR046W ACL4Q03771 387 aa3.57□□□□□ -1.84
TRM112YNR046W DCI1Q08558 271 aa3.57□□□□□ -1.84
TRM112YNR046W DSE3Q08729 430 aa3.57□□□□□ -1.84
TRM112YNR046W APL5Q08951 932 aaKnown RBP3.57□□□□□ -1.84
TRM112YNR046W SPE3Q12074 293 aaKnown RBP3.57□□□□□ -1.84
TRM112YNR046W AEP3Q12089 606 aa3.57□□□□□ -1.84
TRM112YNR046W BSC1Q12140 328 aa3.57□□□□□ -1.84
TRM112YNR046W RIP1P08067 215 aa3.56□□□□□ -1.84
TRM112YNR046W KRE2P27809 442 aa3.56□□□□□ -1.84
TRM112YNR046W HIR2P32480 875 aa3.56□□□□□ -1.84
TRM112YNR046W PRP21P32524 280 aaPredicted RBP3.56□□□□□ -1.84
TRM112YNR046W ECM15P35195 104 aa3.56□□□□□ -1.84
TRM112YNR046W APE4P38821 490 aa3.56□□□□□ -1.84
TRM112YNR046W YMR147WP40218 223 aaKnown RBP3.56□□□□□ -1.84
TRM112YNR046W SEC28P40509 296 aaKnown RBP3.56□□□□□ -1.84
TRM112YNR046W SYG1P40528 902 aa3.56□□□□□ -1.84
TRM112YNR046W YIR014WP40570 242 aa3.56□□□□□ -1.84
TRM112YNR046W SCD6P45978 349 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms