RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W OPT2Q06593 877 aa5.19□□□□□ -1.58
SPG4YMR107W SUB2Q07478 446 aaKnown RBP5.19□□□□□ -1.58
SPG4YMR107W GPB1Q08886 897 aa5.19□□□□□ -1.58
SPG4YMR107W YLL056CQ12177 298 aa5.19□□□□□ -1.58
SPG4YMR107W JLP1Q12358 412 aa5.19□□□□□ -1.58
SPG4YMR107W UBR1P19812 1950 aa5.18□□□□□ -1.58
SPG4YMR107W CBP2P03874 630 aaPredicted RBP5.18□□□□□ -1.58
SPG4YMR107W STE3P06783 470 aa5.18□□□□□ -1.58
SPG4YMR107W ALG7P07286 448 aa5.18□□□□□ -1.58
SPG4YMR107W DSF1P0CX08 502 aa5.18□□□□□ -1.58
SPG4YMR107W YNR073CP0CX09 502 aa5.18□□□□□ -1.58
SPG4YMR107W PHO80P20052 293 aa5.18□□□□□ -1.58
SPG4YMR107W DBP3P20447 523 aaKnown RBP5.18□□□□□ -1.58
SPG4YMR107W RPA135P22138 1203 aaKnown RBP5.18□□□□□ -1.58
SPG4YMR107W SGV1P23293 657 aaKnown RBP5.18□□□□□ -1.58
SPG4YMR107W SAT4P25333 603 aaKnown RBP5.18□□□□□ -1.58
SPG4YMR107W COQ2P32378 372 aa5.18□□□□□ -1.58
SPG4YMR107W UIP5P36137 443 aa5.18□□□□□ -1.58
SPG4YMR107W YHR182WP38870 785 aa5.18□□□□□ -1.58
SPG4YMR107W PLB1P39105 664 aa5.18□□□□□ -1.58
SPG4YMR107W YEN1P40028 759 aa5.18□□□□□ -1.58
SPG4YMR107W BUD13P46947 266 aaPredicted RBP5.18□□□□□ -1.58
SPG4YMR107W NBP35P52920 328 aa5.18□□□□□ -1.58
SPG4YMR107W ROM1P53046 1155 aa5.18□□□□□ -1.58
SPG4YMR107W LSB1P53281 241 aa5.18□□□□□ -1.58
SPG4YMR107W MKC7P53379 596 aa5.18□□□□□ -1.58
SPG4YMR107W IGO1P53897 168 aa5.18□□□□□ -1.58
SPG4YMR107W YAT1P80235 687 aa5.18□□□□□ -1.58
SPG4YMR107W SCS7Q03529 384 aa5.18□□□□□ -1.58
SPG4YMR107W NSE5Q03718 556 aa5.18□□□□□ -1.58
SPG4YMR107W ENT5Q03769 411 aaKnown RBP5.18□□□□□ -1.58
SPG4YMR107W JIP5Q06214 492 aaPredicted RBP5.18□□□□□ -1.58
SPG4YMR107W VTA1Q06263 330 aa5.18□□□□□ -1.58
SPG4YMR107W ESC8Q08119 714 aa5.18□□□□□ -1.58
SPG4YMR107W IES4Q08561 116 aa5.18□□□□□ -1.58
SPG4YMR107W PEX27Q08580 376 aa5.18□□□□□ -1.58
SPG4YMR107W YPL191CQ08930 360 aa5.18□□□□□ -1.58
SPG4YMR107W YLL058WQ12198 575 aa5.18□□□□□ -1.58
SPG4YMR107W OSW2Q12202 724 aa5.18□□□□□ -1.58
SPG4YMR107W YDR061WQ12298 539 aa5.18□□□□□ -1.58
SPG4YMR107W DGK1Q12382 290 aa5.18□□□□□ -1.58
SPG4YMR107W PNS1Q12412 539 aa5.18□□□□□ -1.58
SPG4YMR107W RTN2Q12443 393 aa5.18□□□□□ -1.58
SPG4YMR107W PCD1Q12524 340 aa5.18□□□□□ -1.58
SPG4YMR107W LAA1P39526 2014 aa5.18□□□□□ -1.58
SPG4YMR107W CYC1P00044 109 aaPredicted RBP5.17□□□□□ -1.58
SPG4YMR107W ATP1P07251 545 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W MAS1P10507 462 aa5.17□□□□□ -1.58
SPG4YMR107W RDS2P19541 446 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W CLB3P24870 427 aa5.17□□□□□ -1.58
SPG4YMR107W RPS7AP26786 190 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W CIN8P27895 1000 aa5.17□□□□□ -1.58
SPG4YMR107W CTS1P29029 562 aa5.17□□□□□ -1.58
SPG4YMR107W NTG1P31378 399 aa5.17□□□□□ -1.58
SPG4YMR107W ARP2P32381 391 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W SSO1P32867 290 aa5.17□□□□□ -1.58
SPG4YMR107W RPT1P33299 467 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W TGL1P34163 548 aa5.17□□□□□ -1.58
SPG4YMR107W SPC34P36131 295 aa5.17□□□□□ -1.58
SPG4YMR107W YMC2P38087 329 aa5.17□□□□□ -1.58
SPG4YMR107W SRP72P38688 640 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W PPE1P38796 400 aa5.17□□□□□ -1.58
SPG4YMR107W AIM18P38884 321 aa5.17□□□□□ -1.58
SPG4YMR107W NPR2P39923 615 aa5.17□□□□□ -1.58
SPG4YMR107W UTP7P40055 554 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W RFC2P40348 353 aa5.17□□□□□ -1.58
SPG4YMR107W MPM1P40364 252 aa5.17□□□□□ -1.58
SPG4YMR107W TED1P40533 473 aa5.17□□□□□ -1.58
SPG4YMR107W PRM2P40534 656 aa5.17□□□□□ -1.58
SPG4YMR107W COS4P43542 379 aa5.17□□□□□ -1.58
SPG4YMR107W YJL132WP47014 750 aa5.17□□□□□ -1.58
SPG4YMR107W YJL049WP47048 450 aa5.17□□□□□ -1.58
SPG4YMR107W ASN1P49089 572 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W MND1P53102 219 aa5.17□□□□□ -1.58
SPG4YMR107W LIF1P53150 421 aa5.17□□□□□ -1.58
SPG4YMR107W YGL036WP53185 909 aaPredicted RBP5.17□□□□□ -1.58
SPG4YMR107W SLI1P53304 468 aa5.17□□□□□ -1.58
SPG4YMR107W YNL018CP53976 612 aa5.17□□□□□ -1.58
SPG4YMR107W PRP38Q00723 242 aaPredicted RBP5.17□□□□□ -1.58
SPG4YMR107W YDR541CQ03049 344 aa5.17□□□□□ -1.58
SPG4YMR107W SVL3Q03088 825 aaKnown RBP5.17□□□□□ -1.58
SPG4YMR107W PEX12Q04370 399 aa5.17□□□□□ -1.58
SPG4YMR107W EMI1Q04406 187 aa5.17□□□□□ -1.58
SPG4YMR107W SVF1Q05515 481 aa5.17□□□□□ -1.58
SPG4YMR107W MRPL35Q06678 367 aa5.17□□□□□ -1.58
SPG4YMR107W YDL121CQ07541 149 aa5.17□□□□□ -1.58
SPG4YMR107W AIM39Q08223 395 aa5.17□□□□□ -1.58
SPG4YMR107W MCD1Q12158 566 aa5.17□□□□□ -1.58
SPG4YMR107W REC8Q12188 680 aa5.17□□□□□ -1.58
SPG4YMR107W LCB4Q12246 624 aa5.17□□□□□ -1.58
SPG4YMR107W RBD2Q12270 262 aa5.17□□□□□ -1.58
SPG4YMR107W RPN6Q12377 434 aa5.17□□□□□ -1.58
SPG4YMR107W DED1P06634 604 aaKnown RBP5.16□□□□□ -1.58
SPG4YMR107W GPH1P06738 902 aaKnown RBP5.16□□□□□ -1.58
SPG4YMR107W YPK1P12688 680 aaKnown RBP5.16□□□□□ -1.58
SPG4YMR107W CKS1P20486 150 aaKnown RBP5.16□□□□□ -1.58
SPG4YMR107W APA2P22108 325 aa5.16□□□□□ -1.58
SPG4YMR107W YCK2P23292 546 aaKnown RBP5.16□□□□□ -1.58
SPG4YMR107W OCA4P25366 362 aa5.16□□□□□ -1.58
SPG4YMR107W NAB2P32505 525 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms