RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C TEN1Q07921 160 aa1.51□□□□□ -2.17
COF1YLL050C FRE3Q08905 711 aa1.51□□□□□ -2.17
COF1YLL050C SPE3Q12074 293 aaKnown RBP1.51□□□□□ -2.17
COF1YLL050C YLR049CQ12110 428 aa1.51□□□□□ -2.17
COF1YLL050C MED2Q12124 431 aa1.51□□□□□ -2.17
COF1YLL050C GPM3Q12326 303 aa1.51□□□□□ -2.17
COF1YLL050C SKS1Q12505 502 aa1.51□□□□□ -2.17
COF1YLL050C BRR1Q99177 341 aaPredicted RBP1.51□□□□□ -2.17
COF1YLL050C SGS1P35187 1447 aa1.5□□□□□ -2.17
COF1YLL050C STF1P01098 86 aa1.5□□□□□ -2.17
COF1YLL050C GPH1P06738 902 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C HIP1P06775 603 aa1.5□□□□□ -2.17
COF1YLL050C CBP1P07252 654 aa1.5□□□□□ -2.17
COF1YLL050C GPA1P08539 472 aa1.5□□□□□ -2.17
COF1YLL050C RPL31BP0C2H9 113 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C RAP1P11938 827 aa1.5□□□□□ -2.17
COF1YLL050C KRS1P15180 591 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C SRV2P17555 526 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C PRP2P20095 876 aaPredicted RBP1.5□□□□□ -2.17
COF1YLL050C KGD1P20967 1014 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C SNT1P25357 1226 aa1.5□□□□□ -2.17
COF1YLL050C RRP7P25368 297 aaPredicted RBP1.5□□□□□ -2.17
COF1YLL050C ERV1P27882 189 aa1.5□□□□□ -2.17
COF1YLL050C GAC1P28006 793 aa1.5□□□□□ -2.17
COF1YLL050C IDH2P28241 369 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C MSP1P28737 362 aa1.5□□□□□ -2.17
COF1YLL050C SAC1P32368 623 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C HXT3P32466 567 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C YME2P32843 850 aa1.5□□□□□ -2.17
COF1YLL050C MIA40P36046 403 aa1.5□□□□□ -2.17
COF1YLL050C TUL1P36096 758 aa1.5□□□□□ -2.17
COF1YLL050C DAD2P36162 133 aa1.5□□□□□ -2.17
COF1YLL050C RPL32P38061 130 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C AVT5P38176 459 aa1.5□□□□□ -2.17
COF1YLL050C SLM4P38247 162 aa1.5□□□□□ -2.17
COF1YLL050C RRT2P38332 387 aa1.5□□□□□ -2.17
COF1YLL050C LEU5P38702 357 aa1.5□□□□□ -2.17
COF1YLL050C YHR218WP38899 603 aa1.5□□□□□ -2.17
COF1YLL050C POP2P39008 433 aa1.5□□□□□ -2.17
COF1YLL050C MKT1P40850 830 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C VMA13P41807 478 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C ALK1P43633 760 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C COS5P47187 383 aa1.5□□□□□ -2.17
COF1YLL050C YGR126WP53274 230 aa1.5□□□□□ -2.17
COF1YLL050C TOF2Q02208 771 aa1.5□□□□□ -2.17
COF1YLL050C PFA5Q03289 374 aa1.5□□□□□ -2.17
COF1YLL050C RSF1Q05043 376 aa1.5□□□□□ -2.17
COF1YLL050C YDR341CQ05506 607 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C RBS1Q05672 457 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C ECM30Q06673 1274 aa1.5□□□□□ -2.17
COF1YLL050C COS7Q07788 383 aa1.5□□□□□ -2.17
COF1YLL050C RTT109Q07794 436 aa1.5□□□□□ -2.17
COF1YLL050C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
COF1YLL050C DCI1Q08558 271 aa1.5□□□□□ -2.17
COF1YLL050C DAP1Q12091 152 aa1.5□□□□□ -2.17
COF1YLL050C CFT2Q12102 859 aaPredicted RBP1.5□□□□□ -2.17
COF1YLL050C RPN5Q12250 445 aaKnown RBP1.5□□□□□ -2.17
COF1YLL050C HSP42Q12329 375 aa1.5□□□□□ -2.17
COF1YLL050C ISN1Q99312 450 aa1.5□□□□□ -2.17
COF1YLL050C RPL6BP05739 176 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C RHO2P06781 192 aa1.49□□□□□ -2.17
COF1YLL050C PUT2P07275 575 aa1.49□□□□□ -2.17
COF1YLL050C CHO1P08456 276 aa1.49□□□□□ -2.17
COF1YLL050C BAR1P12630 587 aa1.49□□□□□ -2.17
COF1YLL050C CBS2P14905 389 aa1.49□□□□□ -2.17
COF1YLL050C TRX1P22217 103 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C TKL1P23254 680 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C CLB2P24869 491 aa1.49□□□□□ -2.17
COF1YLL050C PHO84P25297 587 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C YCR006CP25350 157 aa1.49□□□□□ -2.17
COF1YLL050C MGR1P25573 417 aa1.49□□□□□ -2.17
COF1YLL050C SPB1P25582 841 aaPredicted RBP1.49□□□□□ -2.17
COF1YLL050C BRF1P29056 596 aa1.49□□□□□ -2.17
COF1YLL050C MCM4P30665 933 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C PRO3P32263 286 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C GYP6P32806 458 aa1.49□□□□□ -2.17
COF1YLL050C SHP1P34223 423 aa1.49□□□□□ -2.17
COF1YLL050C MTR2P34232 184 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C RRP1P35178 278 aaPredicted RBP1.49□□□□□ -2.17
COF1YLL050C HEL1P36113 551 aa1.49□□□□□ -2.17
COF1YLL050C LAS1P36146 502 aaPredicted RBP1.49□□□□□ -2.17
COF1YLL050C ARA1P38115 344 aa1.49□□□□□ -2.17
COF1YLL050C RIM2P38127 377 aa1.49□□□□□ -2.17
COF1YLL050C FYV8P46949 817 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C YGR149WP48236 432 aa1.49□□□□□ -2.17
COF1YLL050C RMD9P53140 646 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C CAF130P53280 1122 aaPredicted RBP1.49□□□□□ -2.17
COF1YLL050C RPT4P53549 437 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C RSM23Q01163 450 aa1.49□□□□□ -2.17
COF1YLL050C RPL6AQ02326 176 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C YPL107WQ02873 248 aa1.49□□□□□ -2.17
COF1YLL050C YMR130WQ04223 302 aa1.49□□□□□ -2.17
COF1YLL050C HEL2Q05580 639 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C CUE5Q08412 411 aaKnown RBP1.49□□□□□ -2.17
COF1YLL050C PPT2Q12036 173 aa1.49□□□□□ -2.17
COF1YLL050C VPS54Q12071 889 aa1.49□□□□□ -2.17
COF1YLL050C NFI1Q12216 726 aa1.49□□□□□ -2.17
COF1YLL050C FRE6Q12473 712 aa1.49□□□□□ -2.17
COF1YLL050C RPL1AP0CX43 217 aaKnown RBP1.48□□□□□ -2.17
COF1YLL050C RPL1BP0CX44 217 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms