RNA–Protein interactions for RNA: YKL174C

TPO5, Transcript of Protein involved in excretion of putrescine and spermidine, yeast

Gene TPO5, Length 1,857 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPO5	YKL174C	KTR5	P53966	522 aa	Predicted RBP	3.22	□□□□□ -1.89
TPO5	YKL174C	RHO4	Q00246	291 aa		3.22	□□□□□ -1.89
TPO5	YKL174C	RPA49	Q01080	415 aa	Predicted RBP	3.22	□□□□□ -1.89
TPO5	YKL174C	TOF2	Q02208	771 aa		3.22	□□□□□ -1.89
TPO5	YKL174C	YMR160W	Q03823	816 aa		3.22	□□□□□ -1.89
TPO5	YKL174C	RQC1	Q05468	723 aa	Known RBP	3.22	□□□□□ -1.89
TPO5	YKL174C	KEL3	Q08979	651 aa	Predicted RBP	3.22	□□□□□ -1.89
TPO5	YKL174C	SPE3	Q12074	293 aa	Known RBP	3.22	□□□□□ -1.89
TPO5	YKL174C	RGT2	Q12300	763 aa		3.22	□□□□□ -1.89
TPO5	YKL174C	RRD2	Q12461	358 aa		3.22	□□□□□ -1.89
TPO5	YKL174C	SEC39	Q12745	709 aa		3.22	□□□□□ -1.89
TPO5	YKL174C	YRF1-4	O13559	1382 aa		3.22	□□□□□ -1.89
TPO5	YKL174C	SUC2	P00724	532 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	PRP2	P20095	876 aa	Predicted RBP	3.21	□□□□□ -1.9
TPO5	YKL174C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TPO5	YKL174C	ATO2	P32907	282 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	LAG1	P38703	411 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	SPC97	P38863	823 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	TIF4631	P39935	952 aa	Known RBP	3.21	□□□□□ -1.9
TPO5	YKL174C	GUF1	P46943	645 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	MDE1	P47095	244 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	YJR154W	P47181	346 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	YPL068C	Q02749	293 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	YMR254C	Q04838	102 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	RSF1	Q05043	376 aa		3.21	□□□□□ -1.9
TPO5	YKL174C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TPO5	YKL174C	SNT1	P25357	1226 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	YCR043C	P25361	127 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	SPB1	P25582	841 aa	Predicted RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	PAP1	P29468	568 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	SNC1	P31109	117 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	SMI1	P32566	505 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	YME1	P32795	747 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	TCM62	P38228	572 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	ARC40	P38328	384 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	ERG7	P38604	731 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	OTU2	P38747	307 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	YHR218W	P38899	603 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	PCL7	P40186	285 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	IAH1	P41734	238 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	TCB2	P48231	1178 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	CAF130	P53280	1122 aa	Predicted RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	DUG3	P53871	357 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	HEF3	P53978	1044 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	DIG1	Q03063	452 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	YMR087W	Q04299	284 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	DSE3	Q08729	430 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	GPM3	Q12326	303 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	COR1	P07256	457 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	PEP5	P12868	1029 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	MCM4	P30665	933 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	HXT3	P32466	567 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	MSN2	P33748	704 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	YKL023W	P36103	277 aa	Known RBP	3.2	□□□□□ -1.9
TPO5	YKL174C	MBB1	P39534	108 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	HXT14	P42833	540 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	CUL3	P53202	744 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	PDS5	Q04264	1277 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	ROY1	Q04847	553 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	FMP45	Q07651	309 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	CDC45	Q08032	650 aa		3.2	□□□□□ -1.9
TPO5	YKL174C	RPC40	P07703	335 aa	Known RBP	3.19	□□□□□ -1.9
TPO5	YKL174C	RPL31B	P0C2H9	113 aa	Known RBP	3.19	□□□□□ -1.9
TPO5	YKL174C	CLC1	P17891	233 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	PPZ1	P26570	692 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	GYP6	P32806	458 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	DAD2	P36162	133 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	YND1	P40009	630 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	EFM4	P40516	257 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	TES1	P41903	349 aa	Known RBP	3.19	□□□□□ -1.9
TPO5	YKL174C	ATG27	P46989	271 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	TOF1	P53840	1238 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	SHR3	Q02774	210 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	GRX3	Q03835	250 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	ARX1	Q03862	593 aa	Known RBP	3.19	□□□□□ -1.9
TPO5	YKL174C	SSK1	Q07084	712 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	THP1	Q08231	455 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	AFT2	Q08957	416 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	AFI1	Q99222	893 aa		3.19	□□□□□ -1.9
TPO5	YKL174C	BAR1	P12630	587 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	HNM1	P19807	563 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	SUI2	P20459	304 aa	Known RBP	3.18	□□□□□ -1.9
TPO5	YKL174C	ERV1	P27882	189 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	SHP1	P34223	423 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	HEL1	P36113	551 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	SIF2	P38262	535 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	NAS2	P40555	220 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	HST1	P53685	503 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	MMR1	Q06324	491 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	SNA4	Q07549	140 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	THI20	Q08224	551 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	SRL1	Q08673	210 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	RPN5	Q12250	445 aa	Known RBP	3.18	□□□□□ -1.9
TPO5	YKL174C	ACH1	P32316	526 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	TFB1	P32776	642 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	DUG2	P38149	878 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	YHR054C	P38780	354 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	RTT105	P40063	208 aa		3.18	□□□□□ -1.9
TPO5	YKL174C	CAK1	P43568	368 aa	Predicted RBP	3.18	□□□□□ -1.9
TPO5	YKL174C	ALK1	P43633	760 aa	Known RBP	3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms