RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	BRR1	Q99177	341 aa	Predicted RBP	2.95	□□□□□ -1.94
VHR1	YIL056W	FRE1	P32791	686 aa		2.94	□□□□□ -1.94
VHR1	YIL056W	RSM22	P36056	628 aa		2.94	□□□□□ -1.94
VHR1	YIL056W	CBP4	P37267	147 aa		2.94	□□□□□ -1.94
VHR1	YIL056W	CCT6	P39079	546 aa		2.94	□□□□□ -1.94
VHR1	YIL056W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	RIP-Chip
VHR1	YIL056W	RLI1	Q03195	608 aa	Known RBP	2.94	□□□□□ -1.94
VHR1	YIL056W	YMR087W	Q04299	284 aa		2.94	□□□□□ -1.94
VHR1	YIL056W	HEL2	Q05580	639 aa	Known RBP	2.94	□□□□□ -1.94
VHR1	YIL056W	CEX1	Q12453	761 aa		2.94	□□□□□ -1.94
VHR1	YIL056W	RAV1	P47104	1357 aa		2.94	□□□□□ -1.94
VHR1	YIL056W	RAD52	P06778	471 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	PEP4	P07267	405 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	FUR1	P18562	216 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	DPH2	P32461	534 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	YBP1	P38315	674 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	SRP72	P38688	640 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	LRP1	P38801	184 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	DHH1	P39517	506 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	RTT101	P47050	842 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	PET130	P47065	347 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	YJR154W	P47181	346 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	YML6	P51998	286 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	GPI1	P53306	609 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	TIM11	P81449	96 aa	Predicted RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	IRC15	Q02733	499 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	FIN1	Q03898	291 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	TAF11	Q04226	346 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	VPS74	Q06385	345 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	YDL009C	Q12210	107 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	COR1	P07256	457 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	GDH1	P07262	454 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	RPL20A	P0CX23	172 aa	Known RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	RPL20B	P0CX24	172 aa	Predicted RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	MET8	P15807	274 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	POP2	P39008	433 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	YJL213W	P40896	331 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	IRC6	P43615	237 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	SLD5	Q03406	294 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	YLR287C	Q05881	355 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	PHO92	Q06390	306 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	RIM20	Q12033	661 aa		2.93	□□□□□ -1.94
VHR1	YIL056W	RRG1	Q12167	365 aa	Predicted RBP	2.93	□□□□□ -1.94
VHR1	YIL056W	ARG3	P05150	338 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	RED1	P14291	827 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	BUD14	P27637	709 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	RRF1	P38771	230 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	TIF4631	P39935	952 aa	Known RBP	2.92	□□□□□ -1.94
VHR1	YIL056W	RPH1	P39956	796 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	SHO1	P40073	367 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	JEM1	P40358	645 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	MRPL19	P53875	158 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	TIM10	P87108	93 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	PDS5	Q04264	1277 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	YTH1	Q06102	208 aa	Predicted RBP	2.92	□□□□□ -1.94
VHR1	YIL056W	SYO1	Q07395	620 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	YOR365C	Q08844	703 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	YMR230W-A	Q3E7B5	62 aa		2.92	□□□□□ -1.94
VHR1	YIL056W	MES1	P00958	751 aa	Known RBP	2.91	□□□□□ -1.94
VHR1	YIL056W	RPC53	P25441	422 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	DUG2	P38149	878 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	TCM62	P38228	572 aa	Known RBP	2.91	□□□□□ -1.94
VHR1	YIL056W	MTC4	P38335	694 aa	Known RBP	2.91	□□□□□ -1.94
VHR1	YIL056W	SPO22	P40511	975 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	SGT2	Q12118	346 aa	Known RBP	2.91	□□□□□ -1.94
VHR1	YIL056W	CHD1	P32657	1468 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	RPL15A	P05748	204 aa	Known RBP	2.91	□□□□□ -1.94
VHR1	YIL056W	YCR007C	P25354	239 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	SPC110	P32380	944 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	UTR4	P32626	227 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	RGT1	P32862	1170 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	MSN2	P33748	704 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	WBP1	P33767	430 aa	Known RBP	2.91	□□□□□ -1.94
VHR1	YIL056W	MBB1	P39534	108 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	ALG8	P40351	577 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	HEF3	P53978	1044 aa	Known RBP	2.91	□□□□□ -1.94
VHR1	YIL056W	RTT103	Q05543	409 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	NCE102	Q12207	173 aa	RIP-Chip data	2.91	□□□□□ -1.94	not detected
VHR1	YIL056W	SMC6	Q12749	1114 aa		2.91	□□□□□ -1.94
VHR1	YIL056W	MRS3	P10566	314 aa		2.9	□□□□□ -1.95
VHR1	YIL056W	PRP2	P20095	876 aa	Predicted RBP	2.9	□□□□□ -1.95
VHR1	YIL056W	SGV1	P23293	657 aa	Known RBP	2.9	□□□□□ -1.95
VHR1	YIL056W	NPL6	P32832	435 aa		2.9	□□□□□ -1.95
VHR1	YIL056W	TUL1	P36096	758 aa		2.9	□□□□□ -1.95
VHR1	YIL056W	ROK1	P45818	564 aa	Predicted RBP	2.9	□□□□□ -1.95
VHR1	YIL056W	AIM22	P47051	409 aa		2.9	□□□□□ -1.95
VHR1	YIL056W	OCA1	P50946	238 aa	Predicted RBP	2.9	□□□□□ -1.95
VHR1	YIL056W	ARE2	P53629	642 aa	Known RBP	2.9	□□□□□ -1.95
VHR1	YIL056W	SYF1	Q04048	859 aa	Predicted RBP	2.9	□□□□□ -1.95
VHR1	YIL056W	SCW10	Q04951	389 aa		2.9	□□□□□ -1.95
VHR1	YIL056W	SEC39	Q12745	709 aa		2.9	□□□□□ -1.95
VHR1	YIL056W	RPL31B	P0C2H9	113 aa	Known RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	GLK1	P17709	500 aa	Known RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	MCK1	P21965	375 aa	Known RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	PRD1	P25375	712 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	PMU1	P36069	295 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	VID24	P38263	362 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	TWF1	P53250	332 aa		2.89	□□□□□ -1.95
VHR1	YIL056W	YGR250C	P53316	781 aa	Known RBP	2.89	□□□□□ -1.95
VHR1	YIL056W	RPC11	Q04307	110 aa	Predicted RBP	2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms