RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A ALY1P36117 915 aa3.23□□□□□ -1.89
EFG1YGR271C-A ROT2P38138 954 aa3.23□□□□□ -1.89
EFG1YGR271C-A VPS52P39904 641 aa3.23□□□□□ -1.89
EFG1YGR271C-A DIA3P52290 468 aa3.23□□□□□ -1.89
EFG1YGR271C-A OGG1P53397 376 aaPredicted RBP3.23□□□□□ -1.89
EFG1YGR271C-A NCS2P53923 493 aaPredicted RBP3.23□□□□□ -1.89
EFG1YGR271C-A YSA1Q01976 231 aa3.23□□□□□ -1.89
EFG1YGR271C-A CTI6Q08923 506 aa3.23□□□□□ -1.89
EFG1YGR271C-A RCN2Q12044 265 aa3.23□□□□□ -1.89
EFG1YGR271C-A LEU9Q12166 604 aaKnown RBP3.23□□□□□ -1.89
EFG1YGR271C-A YBR126W-AQ8TGU7 68 aa3.23□□□□□ -1.89
EFG1YGR271C-A YCL021W-AQ96VH3 125 aa3.23□□□□□ -1.89
EFG1YGR271C-A INO80P53115 1489 aa3.22□□□□□ -1.89
EFG1YGR271C-A REC107P21651 314 aa3.22□□□□□ -1.89
EFG1YGR271C-A ADH7P25377 361 aa3.22□□□□□ -1.89
EFG1YGR271C-A SYN8P31377 255 aa3.22□□□□□ -1.89
EFG1YGR271C-A PMU1P36069 295 aa3.22□□□□□ -1.89
EFG1YGR271C-A FLC2P39719 783 aa3.22□□□□□ -1.89
EFG1YGR271C-A SEC27P41811 889 aaKnown RBP3.22□□□□□ -1.89
EFG1YGR271C-A FYV8P46949 817 aaKnown RBP3.22□□□□□ -1.89
EFG1YGR271C-A YJL055WP47044 245 aa3.22□□□□□ -1.89
EFG1YGR271C-A RPS7BP48164 190 aaKnown RBP3.22□□□□□ -1.89
EFG1YGR271C-A MRX6P48564 524 aa3.22□□□□□ -1.89
EFG1YGR271C-A RSM23Q01163 450 aa3.22□□□□□ -1.89
EFG1YGR271C-A REX3Q12090 404 aa3.22□□□□□ -1.89
EFG1YGR271C-A NMD4Q12129 218 aa3.22□□□□□ -1.89
EFG1YGR271C-A NFI1Q12216 726 aa3.22□□□□□ -1.89
EFG1YGR271C-A CEX1Q12453 761 aa3.22□□□□□ -1.89
EFG1YGR271C-A NOP58Q12499 511 aaKnown RBP3.22□□□□□ -1.89
EFG1YGR271C-A APE1P14904 514 aa3.21□□□□□ -1.9
EFG1YGR271C-A PRE8P23639 250 aa3.21□□□□□ -1.9
EFG1YGR271C-A PEP3P27801 918 aa3.21□□□□□ -1.9
EFG1YGR271C-A UIP5P36137 443 aa3.21□□□□□ -1.9
EFG1YGR271C-A YBL029WP38201 376 aa3.21□□□□□ -1.9
EFG1YGR271C-A OSH3P38713 996 aaKnown RBP3.21□□□□□ -1.9
EFG1YGR271C-A TIF4631P39935 952 aaKnown RBP3.21□□□□□ -1.9
EFG1YGR271C-A BUR6P40096 142 aa3.21□□□□□ -1.9
EFG1YGR271C-A PCL7P40186 285 aa3.21□□□□□ -1.9
EFG1YGR271C-A LCB2P40970 561 aa3.21□□□□□ -1.9
EFG1YGR271C-A BUD27P43573 796 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
EFG1YGR271C-A ALT2P52892 507 aa3.21□□□□□ -1.9
EFG1YGR271C-A DSD1P53095 428 aa3.21□□□□□ -1.9
EFG1YGR271C-A ART5P53244 586 aaKnown RBP3.21□□□□□ -1.9
EFG1YGR271C-A MSO1P53604 210 aaKnown RBP3.21□□□□□ -1.9
EFG1YGR271C-A SMM1P53720 384 aaKnown RBP3.21□□□□□ -1.9
EFG1YGR271C-A EOS1P53938 366 aa3.21□□□□□ -1.9
EFG1YGR271C-A MSC1Q03104 513 aa3.21□□□□□ -1.9
EFG1YGR271C-A HOT1Q03213 719 aa3.21□□□□□ -1.9
EFG1YGR271C-A AIM32Q04689 311 aa3.21□□□□□ -1.9
EFG1YGR271C-A SYO1Q07395 620 aa3.21□□□□□ -1.9
EFG1YGR271C-A RIX7Q07844 837 aaKnown RBP3.21□□□□□ -1.9
EFG1YGR271C-A YDL009CQ12210 107 aa3.21□□□□□ -1.9
EFG1YGR271C-A GRX6Q12438 231 aa3.21□□□□□ -1.9
EFG1YGR271C-A SKS1Q12505 502 aa3.21□□□□□ -1.9
EFG1YGR271C-A RPC40P07703 335 aaKnown RBP3.2□□□□□ -1.9
EFG1YGR271C-A RRP7P25368 297 aaPredicted RBP3.2□□□□□ -1.9
EFG1YGR271C-A SPB1P25582 841 aaPredicted RBP3.2□□□□□ -1.9
EFG1YGR271C-A APE3P37302 537 aaKnown RBP3.2□□□□□ -1.9
EFG1YGR271C-A RTT105P40063 208 aa3.2□□□□□ -1.9
EFG1YGR271C-A PRE5P40302 234 aaKnown RBP3.2□□□□□ -1.9
EFG1YGR271C-A SSU1P41930 458 aa3.2□□□□□ -1.9
EFG1YGR271C-A MDE1P47095 244 aa3.2□□□□□ -1.9
EFG1YGR271C-A APT1P49435 187 aaKnown RBP3.2□□□□□ -1.9
EFG1YGR271C-A HST1P53685 503 aa3.2□□□□□ -1.9
EFG1YGR271C-A JJJ1P53863 590 aa3.2□□□□□ -1.9
EFG1YGR271C-A EFM6P53970 246 aa3.2□□□□□ -1.9
EFG1YGR271C-A TIM11P81449 96 aaPredicted RBP3.2□□□□□ -1.9
EFG1YGR271C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
EFG1YGR271C-A OAZ1Q02803 292 aa3.2□□□□□ -1.9
EFG1YGR271C-A YMR111CQ04461 462 aaPredicted RBP3.2□□□□□ -1.9
EFG1YGR271C-A ERB1Q04660 807 aaKnown RBP3.2□□□□□ -1.9
EFG1YGR271C-A ECM30Q06673 1274 aa3.2□□□□□ -1.9
EFG1YGR271C-A ENT4Q07872 247 aa3.2□□□□□ -1.9
EFG1YGR271C-A TEN1Q07921 160 aa3.2□□□□□ -1.9
EFG1YGR271C-A YPL272CQ08984 517 aa3.2□□□□□ -1.9
EFG1YGR271C-A FRE6Q12473 712 aa3.2□□□□□ -1.9
EFG1YGR271C-A CBS1P14066 229 aa3.19□□□□□ -1.9
EFG1YGR271C-A YCK1P23291 538 aa3.19□□□□□ -1.9
EFG1YGR271C-A CLB1P24868 471 aa3.19□□□□□ -1.9
EFG1YGR271C-A CLB3P24870 427 aa3.19□□□□□ -1.9
EFG1YGR271C-A PUT3P25502 979 aaPredicted RBP3.19□□□□□ -1.9
EFG1YGR271C-A YCR022CP25620 114 aa3.19□□□□□ -1.9
EFG1YGR271C-A SMI1P32566 505 aa3.19□□□□□ -1.9
EFG1YGR271C-A STB6P36085 766 aa3.19□□□□□ -1.9
EFG1YGR271C-A NUP133P36161 1157 aa3.19□□□□□ -1.9
EFG1YGR271C-A RRT2P38332 387 aa3.19□□□□□ -1.9
EFG1YGR271C-A MET18P40469 1032 aa3.19□□□□□ -1.9
EFG1YGR271C-A YJR154WP47181 346 aa3.19□□□□□ -1.9
EFG1YGR271C-A ADA2Q02336 434 aa3.19□□□□□ -1.9
EFG1YGR271C-A YPL107WQ02873 248 aa3.19□□□□□ -1.9
EFG1YGR271C-A RAD30Q04049 632 aa3.19□□□□□ -1.9
EFG1YGR271C-A GYL1Q04322 720 aa3.19□□□□□ -1.9
EFG1YGR271C-A DPB4Q04603 196 aaKnown RBP3.19□□□□□ -1.9
EFG1YGR271C-A GLO2Q05584 274 aa3.19□□□□□ -1.9
EFG1YGR271C-A YLH47Q06493 454 aa3.19□□□□□ -1.9
EFG1YGR271C-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
EFG1YGR271C-A HNT3Q08702 217 aa3.19□□□□□ -1.9
EFG1YGR271C-A KEL3Q08979 651 aaPredicted RBP3.19□□□□□ -1.9
EFG1YGR271C-A NCE102Q12207 173 aaRIP-Chip data3.19□□□□□ -1.9not detected
EFG1YGR271C-A PEP5P12868 1029 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms