RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W RPN9Q04062 393 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W SIZ1Q04195 904 aa3.6□□□□□ -1.83
SPT6YGR116W NNT1Q05874 261 aa3.6□□□□□ -1.83
SPT6YGR116W GSH2Q08220 491 aa3.6□□□□□ -1.83
SPT6YGR116W PEX27Q08580 376 aa3.6□□□□□ -1.83
SPT6YGR116W RTC5Q12108 567 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W WHI5Q12416 295 aa3.6□□□□□ -1.83
SPT6YGR116W HKR1P41809 1802 aa3.6□□□□□ -1.83
SPT6YGR116W YBR085C-AO43137 85 aa3.6□□□□□ -1.83
SPT6YGR116W ECM25P32525 599 aa3.6□□□□□ -1.83
SPT6YGR116W MCM7P38132 845 aa3.6□□□□□ -1.83
SPT6YGR116W FTH1P38310 465 aa3.6□□□□□ -1.83
SPT6YGR116W RGI1P40043 161 aaPredicted RBP3.6□□□□□ -1.83
SPT6YGR116W YER186CP40101 306 aa3.6□□□□□ -1.83
SPT6YGR116W SET4P42948 560 aa3.6□□□□□ -1.83
SPT6YGR116W RET2P43621 546 aa3.6□□□□□ -1.83
SPT6YGR116W GUF1P46943 645 aa3.6□□□□□ -1.83
SPT6YGR116W SOK2P53438 785 aaPredicted RBP3.6□□□□□ -1.83
SPT6YGR116W DLT1Q04216 342 aa3.6□□□□□ -1.83
SPT6YGR116W ATG38Q05789 226 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W YLR283WQ05867 314 aa3.6□□□□□ -1.83
SPT6YGR116W ZEO1Q08245 113 aa3.6□□□□□ -1.83
SPT6YGR116W SFG1Q12507 346 aa3.6□□□□□ -1.83
SPT6YGR116W MDH1P17505 334 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SPT6YGR116W EMC1P25574 760 aa3.6□□□□□ -1.83
SPT6YGR116W SKT5P34226 696 aa3.6□□□□□ -1.83
SPT6YGR116W RIB1P38066 345 aa3.6□□□□□ -1.83
SPT6YGR116W TOS1P38288 455 aa3.6□□□□□ -1.83
SPT6YGR116W RIM4P38741 713 aa3.6□□□□□ -1.83
SPT6YGR116W UTP7P40055 554 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W YJR154WP47181 346 aa3.6□□□□□ -1.83
SPT6YGR116W LYS4P49367 693 aaPredicted RBP3.6□□□□□ -1.83
SPT6YGR116W TPN1P53099 579 aa3.6□□□□□ -1.83
SPT6YGR116W DAM1P53267 343 aa3.6□□□□□ -1.83
SPT6YGR116W PET117Q02771 107 aa3.6□□□□□ -1.83
SPT6YGR116W PEX29Q03370 554 aa3.6□□□□□ -1.83
SPT6YGR116W YMD8Q03697 442 aa3.6□□□□□ -1.83
SPT6YGR116W SPO20Q04359 397 aa3.6□□□□□ -1.83
SPT6YGR116W RNH1Q04740 348 aa3.6□□□□□ -1.83
SPT6YGR116W YLR345WQ06137 509 aa3.6□□□□□ -1.83
SPT6YGR116W EMG1Q06287 252 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W ARO10Q06408 635 aa3.6□□□□□ -1.83
SPT6YGR116W THP1Q08231 455 aa3.6□□□□□ -1.83
SPT6YGR116W YOL131WQ08270 108 aa3.6□□□□□ -1.83
SPT6YGR116W ICL2Q12031 575 aa3.6□□□□□ -1.83
SPT6YGR116W YLR049CQ12110 428 aa3.6□□□□□ -1.83
SPT6YGR116W HAL9Q12180 1030 aa3.6□□□□□ -1.83
SPT6YGR116W MTR10Q99189 972 aa3.6□□□□□ -1.83
SPT6YGR116W CDC19P00549 500 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W MOD5P07884 428 aa3.6□□□□□ -1.83
SPT6YGR116W MAS1P10507 462 aa3.6□□□□□ -1.83
SPT6YGR116W DAP2P18962 818 aa3.6□□□□□ -1.83
SPT6YGR116W YCK2P23292 546 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W MSS1P32559 526 aaPredicted RBP3.6□□□□□ -1.83
SPT6YGR116W MRPL3P36516 390 aa3.6□□□□□ -1.83
SPT6YGR116W SFB3P38810 929 aa3.6□□□□□ -1.83
SPT6YGR116W XDJ1P39102 459 aa3.6□□□□□ -1.83
SPT6YGR116W AYR1P40471 297 aa3.6□□□□□ -1.83
SPT6YGR116W YFR018CP43599 363 aa3.6□□□□□ -1.83
SPT6YGR116W JJJ3P47138 172 aa3.6□□□□□ -1.83
SPT6YGR116W STB4P50104 949 aa3.6□□□□□ -1.83
SPT6YGR116W BOL2P53082 120 aa3.6□□□□□ -1.83
SPT6YGR116W MRH4P53166 561 aa3.6□□□□□ -1.83
SPT6YGR116W YGL039WP53183 348 aaKnown RBP3.6□□□□□ -1.83
SPT6YGR116W TDA1Q03533 586 aa3.6□□□□□ -1.83
SPT6YGR116W HER2Q03557 464 aa3.6□□□□□ -1.83
SPT6YGR116W TRM82Q03774 444 aa3.6□□□□□ -1.83
SPT6YGR116W YDR249CQ03787 373 aa3.6□□□□□ -1.83
SPT6YGR116W ISA1Q07821 250 aaPredicted RBP3.6□□□□□ -1.83
SPT6YGR116W SLD7Q08457 257 aa3.6□□□□□ -1.83
SPT6YGR116W YPR027CQ12079 277 aa3.6□□□□□ -1.83
SPT6YGR116W RPS4AP0CX35 261 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W RPS4BP0CX36 261 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W LRE1P25579 583 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W PRR1P28708 518 aa3.59□□□□□ -1.83
SPT6YGR116W RTG2P32608 588 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W PTM1P32857 523 aa3.59□□□□□ -1.83
SPT6YGR116W TGL1P34163 548 aa3.59□□□□□ -1.83
SPT6YGR116W COS8P38723 381 aa3.59□□□□□ -1.83
SPT6YGR116W YHR054CP38780 354 aa3.59□□□□□ -1.83
SPT6YGR116W RSC30P38781 883 aa3.59□□□□□ -1.83
SPT6YGR116W SBE22P38814 852 aa3.59□□□□□ -1.83
SPT6YGR116W MNN1P39106 762 aa3.59□□□□□ -1.83
SPT6YGR116W RCY1P39531 840 aa3.59□□□□□ -1.83
SPT6YGR116W PRM9P39551 298 aa3.59□□□□□ -1.83
SPT6YGR116W MBP1P39678 833 aa3.59□□□□□ -1.83
SPT6YGR116W PTI1P39927 425 aaPredicted RBP3.59□□□□□ -1.83
SPT6YGR116W NDE1P40215 560 aa3.59□□□□□ -1.83
SPT6YGR116W ROK1P45818 564 aaPredicted RBP3.59□□□□□ -1.83
SPT6YGR116W PYK2P52489 506 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W MAL11P53048 616 aa3.59□□□□□ -1.83
SPT6YGR116W SIW14P53965 281 aa3.59□□□□□ -1.83
SPT6YGR116W YPL068CQ02749 293 aa3.59□□□□□ -1.83
SPT6YGR116W GCN5Q03330 439 aa3.59□□□□□ -1.83
SPT6YGR116W YML037CQ03703 340 aa3.59□□□□□ -1.83
SPT6YGR116W YLR326WQ06170 240 aaKnown RBP3.59□□□□□ -1.83
SPT6YGR116W MFG1Q07684 458 aa3.59□□□□□ -1.83
SPT6YGR116W NBP2Q12163 236 aa3.59□□□□□ -1.83
SPT6YGR116W YOL107WQ12239 342 aa3.59□□□□□ -1.83
SPT6YGR116W LDB19Q12502 818 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms