RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W DBP9Q06218 594 aaKnown RBP11.16□□□□□ -0.62
RTF1YGL244W MLH3Q12083 715 aa11.16□□□□□ -0.62
RTF1YGL244W YLR149CQ99296 730 aa11.16□□□□□ -0.62
RTF1YGL244W GPM1P00950 247 aaKnown RBP11.15□□□□□ -0.62
RTF1YGL244W YCL049CP25577 312 aa11.15□□□□□ -0.62
RTF1YGL244W CTF13P35203 478 aa11.15□□□□□ -0.62
RTF1YGL244W KTR4P38131 464 aa11.15□□□□□ -0.62
RTF1YGL244W GPX2P38143 162 aa11.15□□□□□ -0.62
RTF1YGL244W RMD8P43620 662 aa11.15□□□□□ -0.62
RTF1YGL244W MET12P46151 657 aa11.15□□□□□ -0.62
RTF1YGL244W BUD13P46947 266 aaPredicted RBP11.15□□□□□ -0.62
RTF1YGL244W DIE2P50076 525 aa11.15□□□□□ -0.62
RTF1YGL244W SWA2Q06677 668 aa11.15□□□□□ -0.62
RTF1YGL244W GSH2Q08220 491 aa11.15□□□□□ -0.62
RTF1YGL244W TIF6Q12522 245 aaKnown RBP11.15□□□□□ -0.62
RTF1YGL244W DAP2P18962 818 aa11.14□□□□□ -0.63
RTF1YGL244W YCR016WP25617 290 aaKnown RBP11.14□□□□□ -0.63
RTF1YGL244W AAR2P32357 355 aaPredicted RBP11.14□□□□□ -0.63
RTF1YGL244W VPS21P36017 210 aaKnown RBP11.14□□□□□ -0.63
RTF1YGL244W ADD66P36040 267 aa11.14□□□□□ -0.63
RTF1YGL244W ALG8P40351 577 aa11.14□□□□□ -0.63
RTF1YGL244W RRN5Q02983 363 aa11.14□□□□□ -0.63
RTF1YGL244W EMI1Q04406 187 aa11.14□□□□□ -0.63
RTF1YGL244W BUD7Q08754 746 aa11.14□□□□□ -0.63
RTF1YGL244W RBD2Q12270 262 aa11.14□□□□□ -0.63
RTF1YGL244W DST1P07273 309 aa11.14□□□□□ -0.63
RTF1YGL244W SPS1P08458 490 aa11.14□□□□□ -0.63
RTF1YGL244W DBF2P22204 572 aa11.14□□□□□ -0.63
RTF1YGL244W DCC1P25559 380 aa11.14□□□□□ -0.63
RTF1YGL244W DSS4P32601 143 aa11.14□□□□□ -0.63
RTF1YGL244W YBR056WP38081 501 aa11.14□□□□□ -0.63
RTF1YGL244W SPF1P39986 1215 aaKnown RBP11.14□□□□□ -0.63
RTF1YGL244W COG3P40094 801 aa11.14□□□□□ -0.63
RTF1YGL244W TOM22P49334 152 aa11.14□□□□□ -0.63
RTF1YGL244W CPR8P53728 308 aa11.14□□□□□ -0.63
RTF1YGL244W PEX13P80667 386 aa11.14□□□□□ -0.63
RTF1YGL244W MCP2Q06567 569 aa11.14□□□□□ -0.63
RTF1YGL244W YOR131CQ12486 218 aa11.14□□□□□ -0.63
RTF1YGL244W UTP30P36144 274 aaKnown RBP11.13□□□□□ -0.63
RTF1YGL244W AHP1P38013 176 aaKnown RBP11.13□□□□□ -0.63
RTF1YGL244W VAC8P39968 578 aa11.13□□□□□ -0.63
RTF1YGL244W MEP2P41948 499 aa11.13□□□□□ -0.63
RTF1YGL244W SKP2P42843 763 aa11.13□□□□□ -0.63
RTF1YGL244W ROM1P53046 1155 aa11.13□□□□□ -0.63
RTF1YGL244W IDP3P53982 420 aaKnown RBP11.13□□□□□ -0.63
RTF1YGL244W NUP49Q02199 472 aa11.13□□□□□ -0.63
RTF1YGL244W YPS7Q06325 596 aa11.13□□□□□ -0.63
RTF1YGL244W GRS2Q06817 618 aa11.13□□□□□ -0.63
RTF1YGL244W ESC8Q08119 714 aa11.13□□□□□ -0.63
RTF1YGL244W HRK1Q08732 759 aaKnown RBP11.13□□□□□ -0.63
RTF1YGL244W SNF8Q12483 233 aa11.13□□□□□ -0.63
RTF1YGL244W TY4B-PA0A0B7P3V8 1104 aa11.12□□□□□ -0.63
RTF1YGL244W RSR1P13856 272 aa11.12□□□□□ -0.63
RTF1YGL244W SDH2P21801 266 aa11.12□□□□□ -0.63
RTF1YGL244W SOK1P40317 901 aa11.12□□□□□ -0.63
RTF1YGL244W ALR2P43553 858 aa11.12□□□□□ -0.63
RTF1YGL244W FET5P43561 622 aa11.12□□□□□ -0.63
RTF1YGL244W RIM21P48565 533 aa11.12□□□□□ -0.63
RTF1YGL244W GPI8P49018 411 aa11.12□□□□□ -0.63
RTF1YGL244W NQM1P53228 333 aaPredicted RBP11.12□□□□□ -0.63
RTF1YGL244W MRPL13Q02204 264 aa11.12□□□□□ -0.63
RTF1YGL244W YLR345WQ06137 509 aa11.12□□□□□ -0.63
RTF1YGL244W SMF3Q12078 473 aaPredicted RBP11.12□□□□□ -0.63
RTF1YGL244W LCB4Q12246 624 aa11.12□□□□□ -0.63
RTF1YGL244W YDL199CQ12407 687 aa11.12□□□□□ -0.63
RTF1YGL244W LDB7P38210 180 aa11.11□□□□□ -0.63
RTF1YGL244W YHR219WP38900 624 aa11.11□□□□□ -0.63
RTF1YGL244W KTR7P40504 517 aa11.11□□□□□ -0.63
RTF1YGL244W PAC11P40960 533 aa11.11□□□□□ -0.63
RTF1YGL244W TIS11P47977 285 aa11.11□□□□□ -0.63
RTF1YGL244W SPC105P53148 917 aa11.11□□□□□ -0.63
RTF1YGL244W MAK3Q03503 176 aa11.11□□□□□ -0.63
RTF1YGL244W NUT2Q06213 157 aa11.11□□□□□ -0.63
RTF1YGL244W MCA1Q08601 432 aa11.11□□□□□ -0.63
RTF1YGL244W ACF2Q12168 779 aa11.11□□□□□ -0.63
RTF1YGL244W CDC4P07834 779 aa11.11□□□□□ -0.63
RTF1YGL244W GAL3P13045 520 aa11.11□□□□□ -0.63
RTF1YGL244W CLN2P20438 545 aa11.11□□□□□ -0.63
RTF1YGL244W CHA1P25379 360 aaKnown RBP11.11□□□□□ -0.63
RTF1YGL244W SEA4P38164 1038 aa11.11□□□□□ -0.63
RTF1YGL244W GND1P38720 489 aaKnown RBP11.11□□□□□ -0.63
RTF1YGL244W YHK8P38776 514 aa11.11□□□□□ -0.63
RTF1YGL244W IPI1P38803 334 aaPredicted RBP11.11□□□□□ -0.63
RTF1YGL244W MPT5P39016 859 aaKnown RBP RIP-Chip data11.11□□□□□ -0.63not detected
RTF1YGL244W YJR098CP47139 656 aa11.11□□□□□ -0.63
RTF1YGL244W YDR132CQ03900 495 aa11.11□□□□□ -0.63
RTF1YGL244W GSF2Q04697 403 aaKnown RBP11.11□□□□□ -0.63
RTF1YGL244W YLR126CQ12288 251 aa11.11□□□□□ -0.63
RTF1YGL244W CAP2P13517 287 aa11.1□□□□□ -0.63
RTF1YGL244W DBP1P24784 617 aaKnown RBP11.1□□□□□ -0.63
RTF1YGL244W SDH3P33421 198 aa11.1□□□□□ -0.63
RTF1YGL244W ASH1P34233 588 aa11.1□□□□□ -0.63
RTF1YGL244W POL12P38121 705 aaPredicted RBP11.1□□□□□ -0.63
RTF1YGL244W TES1P41903 349 aaKnown RBP11.1□□□□□ -0.63
RTF1YGL244W PRM8P53174 237 aa11.1□□□□□ -0.63
RTF1YGL244W ECM22Q05958 814 aaPredicted RBP11.1□□□□□ -0.63
RTF1YGL244W SYO1Q07395 620 aa11.1□□□□□ -0.63
RTF1YGL244W YOL131WQ08270 108 aa11.1□□□□□ -0.63
RTF1YGL244W RBK1P25332 333 aa11.09□□□□□ -0.63
RTF1YGL244W TSL1P38427 1098 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms