RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W GPI11Q06636 219 aa5.28□□□□□ -1.56
CDC43YGL155W VAM6Q07468 1049 aa5.28□□□□□ -1.56
CDC43YGL155W DTD1Q07648 150 aaKnown RBP5.28□□□□□ -1.56
CDC43YGL155W YLL007CQ07799 665 aa5.28□□□□□ -1.56
CDC43YGL155W LCB4Q12246 624 aa5.28□□□□□ -1.56
CDC43YGL155W ICT1Q12385 394 aa5.28□□□□□ -1.56
CDC43YGL155W TIF6Q12522 245 aaKnown RBP5.28□□□□□ -1.56
CDC43YGL155W HXK2P04807 486 aaKnown RBP5.27□□□□□ -1.57
CDC43YGL155W SCH9P11792 824 aaKnown RBP5.27□□□□□ -1.57
CDC43YGL155W GUK1P15454 187 aaKnown RBP5.27□□□□□ -1.57
CDC43YGL155W CTR86P25355 563 aa5.27□□□□□ -1.57
CDC43YGL155W UBC8P28263 218 aa5.27□□□□□ -1.57
CDC43YGL155W AAR2P32357 355 aaPredicted RBP5.27□□□□□ -1.57
CDC43YGL155W PRP21P32524 280 aaPredicted RBP5.27□□□□□ -1.57
CDC43YGL155W CDC5P32562 705 aa5.27□□□□□ -1.57
CDC43YGL155W STE14P32584 239 aa5.27□□□□□ -1.57
CDC43YGL155W PEP7P32609 515 aa5.27□□□□□ -1.57
CDC43YGL155W SGE1P33335 543 aa5.27□□□□□ -1.57
CDC43YGL155W YKR051WP36142 418 aa5.27□□□□□ -1.57
CDC43YGL155W SRL3P36167 246 aa5.27□□□□□ -1.57
CDC43YGL155W KTR4P38131 464 aa5.27□□□□□ -1.57
CDC43YGL155W LDB7P38210 180 aa5.27□□□□□ -1.57
CDC43YGL155W ETP1P38748 585 aaKnown RBP5.27□□□□□ -1.57
CDC43YGL155W BTT1P40314 149 aaPredicted RBP5.27□□□□□ -1.57
CDC43YGL155W STB1P42845 420 aa5.27□□□□□ -1.57
CDC43YGL155W FAR7P43592 221 aa5.27□□□□□ -1.57
CDC43YGL155W SLD3P53135 668 aa5.27□□□□□ -1.57
CDC43YGL155W TRM112P53738 135 aaPredicted RBP5.27□□□□□ -1.57
CDC43YGL155W IDP3P53982 420 aaKnown RBP5.27□□□□□ -1.57
CDC43YGL155W IRC15Q02733 499 aa5.27□□□□□ -1.57
CDC43YGL155W TLG1Q03322 224 aa5.27□□□□□ -1.57
CDC43YGL155W RSN1Q03516 953 aa5.27□□□□□ -1.57
CDC43YGL155W RSM24Q03976 319 aa5.27□□□□□ -1.57
CDC43YGL155W YDR124WQ04608 324 aa5.27□□□□□ -1.57
CDC43YGL155W MFG1Q07684 458 aa5.27□□□□□ -1.57
CDC43YGL155W YOL159CQ08300 171 aa5.27□□□□□ -1.57
CDC43YGL155W RPN8Q08723 338 aaKnown RBP5.27□□□□□ -1.57
CDC43YGL155W SLF1Q12034 447 aaKnown RBP5.27□□□□□ -1.57
CDC43YGL155W YLL054CQ12244 843 aa5.27□□□□□ -1.57
CDC43YGL155W YVC1Q12324 675 aa5.27□□□□□ -1.57
CDC43YGL155W RPN6Q12377 434 aa5.27□□□□□ -1.57
CDC43YGL155W MDM12Q92328 271 aa5.27□□□□□ -1.57
CDC43YGL155W RIB3Q99258 208 aa5.27□□□□□ -1.57
CDC43YGL155W RAS2P01120 322 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W MF(ALPHA)1P01149 165 aa5.26□□□□□ -1.57
CDC43YGL155W MET17P06106 444 aa5.26□□□□□ -1.57
CDC43YGL155W SPT3P06844 337 aa5.26□□□□□ -1.57
CDC43YGL155W SST2P11972 698 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W MRPL8P22353 238 aa5.26□□□□□ -1.57
CDC43YGL155W PHO3P24031 467 aa5.26□□□□□ -1.57
CDC43YGL155W RBK1P25332 333 aa5.26□□□□□ -1.57
CDC43YGL155W CRM1P30822 1084 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W ARP2P32381 391 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W NUP2P32499 720 aa5.26□□□□□ -1.57
CDC43YGL155W MRPL6P32904 214 aa5.26□□□□□ -1.57
CDC43YGL155W YPK3P38070 525 aa5.26□□□□□ -1.57
CDC43YGL155W APM3P38153 483 aa5.26□□□□□ -1.57
CDC43YGL155W SLX1P38324 304 aa5.26□□□□□ -1.57
CDC43YGL155W EGD2P38879 174 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W KRE29P40026 464 aa5.26□□□□□ -1.57
CDC43YGL155W GAB1P41733 394 aa5.26□□□□□ -1.57
CDC43YGL155W IME4P41833 600 aa5.26□□□□□ -1.57
CDC43YGL155W STB2P46679 850 aa5.26□□□□□ -1.57
CDC43YGL155W GLG2P47011 380 aa5.26□□□□□ -1.57
CDC43YGL155W YJL055WP47044 245 aa5.26□□□□□ -1.57
CDC43YGL155W GPI8P49018 411 aa5.26□□□□□ -1.57
CDC43YGL155W MON1P53129 644 aa5.26□□□□□ -1.57
CDC43YGL155W PIR3Q03180 325 aa5.26□□□□□ -1.57
CDC43YGL155W ARP10Q04549 284 aa5.26□□□□□ -1.57
CDC43YGL155W BCH1Q05029 724 aa5.26□□□□□ -1.57
CDC43YGL155W YHC1Q05900 231 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W VTA1Q06263 330 aa5.26□□□□□ -1.57
CDC43YGL155W MRI1Q06489 411 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W COS7Q07788 383 aa5.26□□□□□ -1.57
CDC43YGL155W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CDC43YGL155W PUS7Q08647 676 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W SOG2Q08817 791 aa5.26□□□□□ -1.57
CDC43YGL155W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
CDC43YGL155W TGL5Q12043 749 aa5.26□□□□□ -1.57
CDC43YGL155W JLP1Q12358 412 aa5.26□□□□□ -1.57
CDC43YGL155W LPX1Q12405 387 aaKnown RBP5.26□□□□□ -1.57
CDC43YGL155W MHF1Q3E835 90 aa5.26□□□□□ -1.57
CDC43YGL155W TY4B-PA0A0B7P3V8 1104 aa5.25□□□□□ -1.57
CDC43YGL155W MAS1P10507 462 aa5.25□□□□□ -1.57
CDC43YGL155W GCN3P14741 305 aa5.25□□□□□ -1.57
CDC43YGL155W RPB10P22139 70 aa5.25□□□□□ -1.57
CDC43YGL155W GRR1P24814 1151 aa5.25□□□□□ -1.57
CDC43YGL155W OCA4P25366 362 aa5.25□□□□□ -1.57
CDC43YGL155W PPZ1P26570 692 aa5.25□□□□□ -1.57
CDC43YGL155W ITR2P30606 609 aa5.25□□□□□ -1.57
CDC43YGL155W NTG1P31378 399 aa5.25□□□□□ -1.57
CDC43YGL155W NUF2P33895 451 aa5.25□□□□□ -1.57
CDC43YGL155W THI80P35202 319 aa5.25□□□□□ -1.57
CDC43YGL155W MAE1P36013 669 aaKnown RBP5.25□□□□□ -1.57
CDC43YGL155W YCR087C-AP37263 153 aa5.25□□□□□ -1.57
CDC43YGL155W EXO84P38261 753 aa5.25□□□□□ -1.57
CDC43YGL155W MTG2P38860 518 aa5.25□□□□□ -1.57
CDC43YGL155W MPT5P39016 859 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
CDC43YGL155W YAR028WP39548 234 aa5.25□□□□□ -1.57
CDC43YGL155W SWD1P39706 426 aa5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms