RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DEG1	YFL001W	KEL3	Q08979	651 aa	Predicted RBP	4.76	□□□□□ -1.65
DEG1	YFL001W	VPS54	Q12071	889 aa		4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-JR2	P47100	1755 aa	Known RBP	4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-ER2	Q03619	1755 aa		4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-MR1	Q04214	1755 aa		4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-NL1	Q12112	1755 aa		4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-GR1	Q12141	1755 aa		4.76	□□□□□ -1.65
DEG1	YFL001W	TY1B-BL	Q12490	1755 aa		4.76	□□□□□ -1.65
DEG1	YFL001W	GPH1	P06738	902 aa	Known RBP	4.75	□□□□□ -1.65
DEG1	YFL001W	RHO2	P06781	192 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	SNF3	P10870	884 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	ADY2	P25613	283 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	AFG1	P32317	509 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	UIP5	P36137	443 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	LAS1	P36146	502 aa	Predicted RBP	4.75	□□□□□ -1.65
DEG1	YFL001W	SNG1	P46950	547 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	BPL1	P48445	690 aa	Predicted RBP	4.75	□□□□□ -1.65
DEG1	YFL001W	YDL057W	Q07379	328 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	YOR365C	Q08844	703 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	CFT2	Q12102	859 aa	Predicted RBP	4.75	□□□□□ -1.65
DEG1	YFL001W	VPS15	P22219	1454 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	GEA2	P39993	1459 aa	Known RBP	4.75	□□□□□ -1.65
DEG1	YFL001W	RAV1	P47104	1357 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	NTE1	Q04958	1679 aa		4.75	□□□□□ -1.65
DEG1	YFL001W	LPD1	P09624	499 aa	Known RBP	4.74	□□□□□ -1.65
DEG1	YFL001W	URA4	P20051	364 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	CLN1	P20437	546 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	HOT13	P36078	116 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	YKL023W	P36103	277 aa	Known RBP	4.74	□□□□□ -1.65
DEG1	YFL001W	DAD2	P36162	133 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	ARA1	P38115	344 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	POP2	P39008	433 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	SER3	P40054	469 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	YJL132W	P47014	750 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	TAX4	P47030	604 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	ECM27	P47144	725 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	TOM22	P49334	152 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	UBP8	P50102	471 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	DRN1	P53255	507 aa	Known RBP	4.74	□□□□□ -1.65
DEG1	YFL001W	TOF1	P53840	1238 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	THP1	Q08231	455 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	APL5	Q08951	932 aa	Known RBP	4.74	□□□□□ -1.65
DEG1	YFL001W	MED2	Q12124	431 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
DEG1	YFL001W	VAM3	Q12241	283 aa		4.74	□□□□□ -1.65
DEG1	YFL001W	PDR15	Q04182	1529 aa	Known RBP	4.74	□□□□□ -1.65
DEG1	YFL001W	RPO21	P04050	1733 aa	Known RBP	4.74	□□□□□ -1.65
DEG1	YFL001W	YML002W	P0CF17	737 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	SPO7	P18410	259 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	CNA1	P23287	553 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	MSP1	P28737	362 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	BRF1	P29056	596 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	KEL1	P38853	1164 aa	Known RBP	4.73	□□□□□ -1.65
DEG1	YFL001W	TIF4631	P39935	952 aa	Known RBP	4.73	□□□□□ -1.65
DEG1	YFL001W	YMR147W	P40218	223 aa	Known RBP	4.73	□□□□□ -1.65
DEG1	YFL001W	YIL060W	P40519	144 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	HXT9	P40885	567 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	QRI1	P43123	477 aa	Known RBP	4.73	□□□□□ -1.65
DEG1	YFL001W	IRC7	P43623	340 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	YMR130W	Q04223	302 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	ARP10	Q04549	284 aa		4.73	□□□□□ -1.65
DEG1	YFL001W	BRR1	Q99177	341 aa	Predicted RBP	4.73	□□□□□ -1.65
DEG1	YFL001W	DAL5	P15365	543 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	SRV2	P17555	526 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	GEX1	P25596	615 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	HIR2	P32480	875 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	ROT2	P38138	954 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	BNA4	P38169	460 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	TCM62	P38228	572 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	SIF2	P38262	535 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	PHO90	P39535	881 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	PES4	P39684	611 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	FYV8	P46949	817 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	DUG3	P53871	357 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	PFA4	Q12006	378 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	AEP3	Q12089	606 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	GEA1	P47102	1408 aa	Predicted RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	MLP2	P40457	1679 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	RIP1	P08067	215 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	PEP5	P12868	1029 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	TRX1	P22217	103 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	SGV1	P23293	657 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	MCM4	P30665	933 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	OCA1	P50946	238 aa	Predicted RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	RMD9	P53140	646 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	MLC1	P53141	149 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	PKP2	P53170	491 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	SMM1	P53720	384 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	RHO5	P53879	331 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	YVH1	Q02256	364 aa	Known RBP	4.72	□□□□□ -1.65
DEG1	YFL001W	SHR3	Q02774	210 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	CAC2	Q04199	468 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	DCS1	Q06151	350 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	HSP42	Q12329	375 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	RRD2	Q12461	358 aa		4.72	□□□□□ -1.65
DEG1	YFL001W	DRS2	P39524	1355 aa		4.71	□□□□□ -1.66
DEG1	YFL001W	RAD52	P06778	471 aa	Known RBP	4.71	□□□□□ -1.66
DEG1	YFL001W	RPB8	P20436	146 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms