RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	FSH1	P38777	243 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	EGD2	P38879	174 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	FAD1	P38913	306 aa		4.06	□□□□□ -1.76
TPA1	YER049W	AST2	P39945	430 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	YJL070C	P40361	888 aa		4.06	□□□□□ -1.76
TPA1	YER049W	MET18	P40469	1032 aa		4.06	□□□□□ -1.76
TPA1	YER049W	GUF1	P46943	645 aa		4.06	□□□□□ -1.76
TPA1	YER049W	MPS3	P47069	682 aa		4.06	□□□□□ -1.76
TPA1	YER049W	NCS6	P53088	359 aa		4.06	□□□□□ -1.76
TPA1	YER049W	GPG1	P53130	126 aa		4.06	□□□□□ -1.76
TPA1	YER049W	CLD1	P53264	445 aa		4.06	□□□□□ -1.76
TPA1	YER049W	DAM1	P53267	343 aa		4.06	□□□□□ -1.76
TPA1	YER049W	ALG11	P53954	548 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	KTR6	P54070	446 aa		4.06	□□□□□ -1.76
TPA1	YER049W	PRP38	Q00723	242 aa	Predicted RBP	4.06	□□□□□ -1.76
TPA1	YER049W	SPR6	Q01684	191 aa		4.06	□□□□□ -1.76
TPA1	YER049W	TOF2	Q02208	771 aa		4.06	□□□□□ -1.76
TPA1	YER049W	TLG1	Q03322	224 aa		4.06	□□□□□ -1.76
TPA1	YER049W	RRP17	Q04031	235 aa	Predicted RBP	4.06	□□□□□ -1.76
TPA1	YER049W	AIM32	Q04689	311 aa		4.06	□□□□□ -1.76
TPA1	YER049W	THI73	Q07904	523 aa		4.06	□□□□□ -1.76
TPA1	YER049W	SGO1	Q08490	590 aa		4.06	□□□□□ -1.76
TPA1	YER049W	RSA1	Q08932	381 aa		4.06	□□□□□ -1.76
TPA1	YER049W	MDY2	Q12285	212 aa		4.06	□□□□□ -1.76
TPA1	YER049W	LPX1	Q12405	387 aa	Known RBP	4.06	□□□□□ -1.76
TPA1	YER049W	RMD5	Q12508	421 aa		4.06	□□□□□ -1.76
TPA1	YER049W	YOL159C-A	Q3E769	90 aa		4.06	□□□□□ -1.76
TPA1	YER049W	MED11	Q99278	115 aa		4.06	□□□□□ -1.76
TPA1	YER049W	SUC2	P00724	532 aa		4.05	□□□□□ -1.76
TPA1	YER049W	CBS2	P14905	389 aa		4.05	□□□□□ -1.76
TPA1	YER049W	YSP3	P25036	478 aa		4.05	□□□□□ -1.76
TPA1	YER049W	LRE1	P25579	583 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	BUB2	P26448	306 aa	Predicted RBP	4.05	□□□□□ -1.76
TPA1	YER049W	RGT1	P32862	1170 aa		4.05	□□□□□ -1.76
TPA1	YER049W	YKL100C	P34248	587 aa		4.05	□□□□□ -1.76
TPA1	YER049W	MRPL7	P36519	292 aa		4.05	□□□□□ -1.76
TPA1	YER049W	YBR053C	P38235	358 aa		4.05	□□□□□ -1.76
TPA1	YER049W	MUP3	P38734	546 aa		4.05	□□□□□ -1.76
TPA1	YER049W	GIP4	P39732	760 aa		4.05	□□□□□ -1.76
TPA1	YER049W	GCD14	P46959	383 aa	Predicted RBP	4.05	□□□□□ -1.76
TPA1	YER049W	YJR154W	P47181	346 aa		4.05	□□□□□ -1.76
TPA1	YER049W	NAS6	P50086	228 aa		4.05	□□□□□ -1.76
TPA1	YER049W	STB4	P50104	949 aa		4.05	□□□□□ -1.76
TPA1	YER049W	GTR2	P53290	341 aa		4.05	□□□□□ -1.76
TPA1	YER049W	RMI1	Q02685	241 aa		4.05	□□□□□ -1.76
TPA1	YER049W	INA17	Q02888	182 aa		4.05	□□□□□ -1.76
TPA1	YER049W	CWC21	Q03375	135 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	ENT5	Q03769	411 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	GRX3	Q03835	250 aa		4.05	□□□□□ -1.76
TPA1	YER049W	YDR131C	Q03899	556 aa		4.05	□□□□□ -1.76
TPA1	YER049W	URC2	Q04411	772 aa		4.05	□□□□□ -1.76
TPA1	YER049W	BRE4	Q07660	1125 aa		4.05	□□□□□ -1.76
TPA1	YER049W	AAD4	Q07747	329 aa		4.05	□□□□□ -1.76
TPA1	YER049W	SGT1	Q08446	395 aa		4.05	□□□□□ -1.76
TPA1	YER049W	UAF30	Q08747	228 aa		4.05	□□□□□ -1.76
TPA1	YER049W	UIP4	Q08926	304 aa		4.05	□□□□□ -1.76
TPA1	YER049W	RKM1	Q08961	583 aa	Predicted RBP	4.05	□□□□□ -1.76
TPA1	YER049W	GPM2	Q12008	311 aa		4.05	□□□□□ -1.76
TPA1	YER049W	CFT2	Q12102	859 aa	Predicted RBP	4.05	□□□□□ -1.76
TPA1	YER049W	TRP3	P00937	484 aa		4.05	□□□□□ -1.76
TPA1	YER049W	ABF1	P14164	731 aa		4.05	□□□□□ -1.76
TPA1	YER049W	ART10	P18634	518 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	GAC1	P28006	793 aa		4.05	□□□□□ -1.76
TPA1	YER049W	CYS3	P31373	394 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	ACH1	P32316	526 aa		4.05	□□□□□ -1.76
TPA1	YER049W	NUP2	P32499	720 aa		4.05	□□□□□ -1.76
TPA1	YER049W	STE14	P32584	239 aa		4.05	□□□□□ -1.76
TPA1	YER049W	GDH2	P33327	1092 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	MRP21	P38175	177 aa		4.05	□□□□□ -1.76
TPA1	YER049W	ECM8	P38246	354 aa		4.05	□□□□□ -1.76
TPA1	YER049W	SFB3	P38810	929 aa		4.05	□□□□□ -1.76
TPA1	YER049W	RBG1	P39729	369 aa		4.05	□□□□□ -1.76
TPA1	YER049W	HAT2	P39984	401 aa		4.05	□□□□□ -1.76
TPA1	YER049W	YEL028W	P39989	153 aa		4.05	□□□□□ -1.76
TPA1	YER049W	ELO3	P40319	345 aa		4.05	□□□□□ -1.76
TPA1	YER049W	VMA13	P41807	478 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	CAF16	P43569	289 aa		4.05	□□□□□ -1.76
TPA1	YER049W	RPS10B	P46784	105 aa	Known RBP	4.05	□□□□□ -1.76
TPA1	YER049W	HXT16	P47185	567 aa		4.05	□□□□□ -1.76
TPA1	YER049W	MTR3	P48240	250 aa	Predicted RBP	4.05	□□□□□ -1.76
TPA1	YER049W	NIT3	P49954	291 aa		4.05	□□□□□ -1.76
TPA1	YER049W	SCS3	P53012	380 aa		4.05	□□□□□ -1.76
TPA1	YER049W	SLD3	P53135	668 aa		4.05	□□□□□ -1.76
TPA1	YER049W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
TPA1	YER049W	SPP2	Q02521	185 aa		4.05	□□□□□ -1.76
TPA1	YER049W	FMP30	Q02883	468 aa		4.05	□□□□□ -1.76
TPA1	YER049W	YML131W	Q03102	365 aa		4.05	□□□□□ -1.76
TPA1	YER049W	TRM12	Q04235	462 aa		4.05	□□□□□ -1.76
TPA1	YER049W	MGR3	Q04472	501 aa		4.05	□□□□□ -1.76
TPA1	YER049W	ENT2	Q05785	613 aa		4.05	□□□□□ -1.76
TPA1	YER049W	RPS10A	Q08745	105 aa	Predicted RBP	4.05	□□□□□ -1.76
TPA1	YER049W	PFK27	Q12471	397 aa	Predicted RBP	4.05	□□□□□ -1.76
TPA1	YER049W	YKL018C-A	Q3E7A7	99 aa		4.05	□□□□□ -1.76
TPA1	YER049W	RPN13	O13563	156 aa		4.04	□□□□□ -1.76
TPA1	YER049W	CYC7	P00045	113 aa		4.04	□□□□□ -1.76
TPA1	YER049W	MET17	P06106	444 aa		4.04	□□□□□ -1.76
TPA1	YER049W	MRP13	P12686	339 aa		4.04	□□□□□ -1.76
TPA1	YER049W	STF2	P16965	84 aa		4.04	□□□□□ -1.76
TPA1	YER049W	AAT2	P23542	418 aa	Known RBP	4.04	□□□□□ -1.76
TPA1	YER049W	SGF29	P25554	259 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 969.2 ms