RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	THI3	Q07471	609 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	HFI1	Q12060	488 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	TIP41	Q12199	356 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	SKM1	Q12469	655 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	SSN2	P38931	1420 aa		4.09	□□□□□ -1.76
HCM1	YCR065W	ALG7	P07286	448 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	GLN4	P13188	809 aa	Known RBP	4.08	□□□□□ -1.76
HCM1	YCR065W	VPS34	P22543	875 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	PHO3	P24031	467 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	CDC10	P25342	322 aa	Known RBP	4.08	□□□□□ -1.76
HCM1	YCR065W	RPS7A	P26786	190 aa	Known RBP	4.08	□□□□□ -1.76
HCM1	YCR065W	MCM4	P30665	933 aa	Known RBP	4.08	□□□□□ -1.76
HCM1	YCR065W	MF(ALPHA)2	P32435	120 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	SPO23	P33757	523 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	TGL1	P34163	548 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	DBP7	P36120	742 aa	Known RBP	4.08	□□□□□ -1.76
HCM1	YCR065W	HMT1	P38074	348 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	MAL32	P38158	584 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	YHI9	P38765	294 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	FMC1	P40491	155 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	YIL092W	P40497	633 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	YJR056C	P47115	236 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	GTO1	P48239	356 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	DRN1	P53255	507 aa	Known RBP	4.08	□□□□□ -1.76
HCM1	YCR065W	MAL12	P53341	584 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	CUS2	P53830	285 aa	Predicted RBP	4.08	□□□□□ -1.76
HCM1	YCR065W	BNA7	Q04066	261 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	THI7	Q05998	598 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	SYO1	Q07395	620 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	IRC13	Q08630	104 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
HCM1	YCR065W	INP53	Q12271	1107 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	NBL1	Q3E7Y6	73 aa		4.08	□□□□□ -1.76
HCM1	YCR065W	VPS63	O13549	108 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	RPS24A	P0CX31	135 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	RPS24B	P0CX32	135 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	ATP12	P22135	325 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	DBF2	P22204	572 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	AFG1	P32317	509 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	RPC34	P32910	317 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	LOS1	P33418	1100 aa	Predicted RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	CDS1	P38221	457 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	YBR242W	P38331	238 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	FRT2	P39734	528 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	SEC72	P39742	193 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	AFG3	P39925	761 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	YEL057C	P39983	233 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	JHD1	P40034	492 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	YNL195C	P40168	261 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	UTP25	P40498	721 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	PSP1	P50896	841 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	LIF1	P53150	421 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	MTL1	P53214	551 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	YGR042W	P53227	271 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	MRPL50	P53724	139 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	YNL143C	P53908	130 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	HEF3	P53978	1044 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	YMR206W	Q03695	313 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	EMI2	Q04409	500 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	ROY1	Q04847	553 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	OMS1	Q06668	471 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	VAM6	Q07468	1049 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	RPN8	Q08723	338 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	CWC2	Q12046	339 aa	Predicted RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	YBR126W-A	Q8TGU7	68 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	AFI1	Q99222	893 aa		4.07	□□□□□ -1.76
HCM1	YCR065W	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	XRN1	P22147	1528 aa	Known RBP	4.07	□□□□□ -1.76
HCM1	YCR065W	SIR3	P06701	978 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	PPR1	P07272	904 aa	Predicted RBP	4.06	□□□□□ -1.76
HCM1	YCR065W	LPD1	P09624	499 aa	Known RBP	4.06	□□□□□ -1.76
HCM1	YCR065W	PCK1	P10963	549 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	BET2	P20133	325 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	RHB1	P25378	209 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	IMG1	P25626	169 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	PEP3	P27801	918 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	PTK1	P36002	662 aa	Predicted RBP	4.06	□□□□□ -1.76
HCM1	YCR065W	GEX2	P36173	615 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	RFT1	P38206	574 aa	Predicted RBP	4.06	□□□□□ -1.76
HCM1	YCR065W	FES1	P38260	290 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	SWC5	P38326	303 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	FMO1	P38866	432 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	GID8	P40208	455 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	SOK1	P40317	901 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	GAB1	P41733	394 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	ELP2	P42935	788 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	YJL163C	P46996	555 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	PET130	P47065	347 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	MND1	P53102	219 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	PEF1	P53238	335 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	YGR111W	P53265	400 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	RCF2	P53721	224 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	YSA1	Q01976	231 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	YDC1	Q02896	317 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	USA1	Q03714	838 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	PEX12	Q04370	399 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	ADY4	Q05955	493 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	PIG1	Q06216	648 aa		4.06	□□□□□ -1.76
HCM1	YCR065W	YPR147C	Q06522	304 aa	Known RBP	4.06	□□□□□ -1.76
HCM1	YCR065W	YPL216W	Q08964	1102 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms