RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W VAM6Q07468 1049 aa4.34□□□□□ -1.71
SLX1YBR228W RLP24Q07915 199 aaKnown RBP4.34□□□□□ -1.71
SLX1YBR228W EBP2P36049 427 aaKnown RBP4.33□□□□□ -1.72
SLX1YBR228W NTR2P36118 322 aaPredicted RBP4.33□□□□□ -1.72
SLX1YBR228W VID24P38263 362 aa4.33□□□□□ -1.72
SLX1YBR228W HXT9P40885 567 aa4.33□□□□□ -1.72
SLX1YBR228W HSH155P49955 971 aaKnown RBP4.33□□□□□ -1.72
SLX1YBR228W AZR1P50080 613 aa4.33□□□□□ -1.72
SLX1YBR228W SHE10P53075 577 aa4.33□□□□□ -1.72
SLX1YBR228W ECM7Q06200 448 aa4.33□□□□□ -1.72
SLX1YBR228W YDL218WQ07629 317 aa4.33□□□□□ -1.72
SLX1YBR228W APL4Q12028 832 aa4.33□□□□□ -1.72
SLX1YBR228W DAP1Q12091 152 aa4.33□□□□□ -1.72
SLX1YBR228W YLR422WQ06409 1932 aa4.33□□□□□ -1.72
SLX1YBR228W COX4P04037 155 aa4.32□□□□□ -1.72
SLX1YBR228W XRS2P33301 854 aa4.32□□□□□ -1.72
SLX1YBR228W YKL023WP36103 277 aaKnown RBP4.32□□□□□ -1.72
SLX1YBR228W TVP23P38962 199 aa4.32□□□□□ -1.72
SLX1YBR228W ALD5P40047 520 aaKnown RBP4.32□□□□□ -1.72
SLX1YBR228W SCD6P45978 349 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72 RIP-Chip
SLX1YBR228W COS5P47187 383 aa4.32□□□□□ -1.72
SLX1YBR228W IMP4P53941 290 aaKnown RBP4.32□□□□□ -1.72
SLX1YBR228W YLR287CQ05881 355 aa4.32□□□□□ -1.72
SLX1YBR228W YLR297WQ05899 129 aa4.32□□□□□ -1.72
SLX1YBR228W ECM30Q06673 1274 aa4.32□□□□□ -1.72
SLX1YBR228W SHS1Q07657 551 aa4.32□□□□□ -1.72
SLX1YBR228W PLP2Q12017 286 aa4.32□□□□□ -1.72
SLX1YBR228W RRP6Q12149 733 aaKnown RBP4.32□□□□□ -1.72
SLX1YBR228W YDR524C-BQ3E6R4 66 aa4.32□□□□□ -1.72
SLX1YBR228W RPL4AP10664 362 aaKnown RBP4.31□□□□□ -1.72
SLX1YBR228W SPO12P17123 173 aa4.31□□□□□ -1.72
SLX1YBR228W POT1P27796 417 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SLX1YBR228W SKG6P32900 734 aaPredicted RBP4.31□□□□□ -1.72
SLX1YBR228W NIP100P33420 868 aa4.31□□□□□ -1.72
SLX1YBR228W CAB3P36076 571 aa4.31□□□□□ -1.72
SLX1YBR228W MRX3P38172 270 aa4.31□□□□□ -1.72
SLX1YBR228W MMS4P38257 691 aa4.31□□□□□ -1.72
SLX1YBR228W ECM10P39987 644 aa4.31□□□□□ -1.72
SLX1YBR228W FET5P43561 622 aa4.31□□□□□ -1.72
SLX1YBR228W YFR020WP43600 232 aa4.31□□□□□ -1.72
SLX1YBR228W ROK1P45818 564 aaPredicted RBP4.31□□□□□ -1.72
SLX1YBR228W SGM1P47166 707 aa4.31□□□□□ -1.72
SLX1YBR228W RPL4BP49626 362 aaKnown RBP4.31□□□□□ -1.72
SLX1YBR228W RSM28Q03430 361 aa4.31□□□□□ -1.72
SLX1YBR228W CSR1Q06705 408 aaKnown RBP4.31□□□□□ -1.72
SLX1YBR228W YPR078CQ06813 372 aa4.31□□□□□ -1.72
SLX1YBR228W ATG9Q12142 997 aa4.31□□□□□ -1.72
SLX1YBR228W ADE4P04046 510 aaKnown RBP4.3□□□□□ -1.72
SLX1YBR228W NAT1P12945 854 aaKnown RBP4.3□□□□□ -1.72
SLX1YBR228W PRP16P15938 1071 aaPredicted RBP4.3□□□□□ -1.72
SLX1YBR228W GLN3P18494 730 aa4.3□□□□□ -1.72
SLX1YBR228W CLB2P24869 491 aa4.3□□□□□ -1.72
SLX1YBR228W PTP2P29461 750 aa4.3□□□□□ -1.72
SLX1YBR228W SPC110P32380 944 aa4.3□□□□□ -1.72
SLX1YBR228W SWI3P32591 825 aa4.3□□□□□ -1.72
SLX1YBR228W MFT1P33441 392 aaKnown RBP4.3□□□□□ -1.72
SLX1YBR228W DRE2P36152 348 aa4.3□□□□□ -1.72
SLX1YBR228W GEX2P36173 615 aa4.3□□□□□ -1.72
SLX1YBR228W PCH2P38126 564 aa4.3□□□□□ -1.72
SLX1YBR228W SHQ1P40486 507 aaPredicted RBP4.3□□□□□ -1.72
SLX1YBR228W SWP82P43554 623 aa4.3□□□□□ -1.72
SLX1YBR228W VPS38Q05919 439 aa4.3□□□□□ -1.72
SLX1YBR228W COX17Q12287 69 aa4.3□□□□□ -1.72
SLX1YBR228W ASP3-2P0CX77 362 aa4.29□□□□□ -1.72
SLX1YBR228W ASP3-3P0CX78 362 aa4.29□□□□□ -1.72
SLX1YBR228W ASP3-4P0CX79 362 aa4.29□□□□□ -1.72
SLX1YBR228W ASP3-1P0CZ17 362 aa4.29□□□□□ -1.72
SLX1YBR228W CDC42P19073 191 aa4.29□□□□□ -1.72
SLX1YBR228W PRR1P28708 518 aa4.29□□□□□ -1.72
SLX1YBR228W CBF2P32504 956 aa4.29□□□□□ -1.72
SLX1YBR228W MRPL36P36531 177 aa4.29□□□□□ -1.72
SLX1YBR228W SEC31P38968 1273 aaKnown RBP4.29□□□□□ -1.72
SLX1YBR228W SMC2P38989 1170 aaKnown RBP4.29□□□□□ -1.72
SLX1YBR228W YER186CP40101 306 aa4.29□□□□□ -1.72
SLX1YBR228W LAM5P43560 674 aa4.29□□□□□ -1.72
SLX1YBR228W SMC3P47037 1230 aa4.29□□□□□ -1.72
SLX1YBR228W CPR7P47103 393 aa4.29□□□□□ -1.72
SLX1YBR228W YNL134CP53912 376 aaKnown RBP4.29□□□□□ -1.72
SLX1YBR228W RPA49Q01080 415 aaPredicted RBP4.29□□□□□ -1.72
SLX1YBR228W PPM1Q04081 328 aa4.29□□□□□ -1.72
SLX1YBR228W GIS3Q12418 502 aa4.29□□□□□ -1.72
SLX1YBR228W PCD1Q12524 340 aa4.29□□□□□ -1.72
SLX1YBR228W MTF2P10849 440 aa4.28□□□□□ -1.72
SLX1YBR228W RRT12P25381 491 aa4.28□□□□□ -1.72
SLX1YBR228W GID7P25569 745 aa4.28□□□□□ -1.72
SLX1YBR228W BUD2P33314 1104 aa4.28□□□□□ -1.72
SLX1YBR228W JNM1P36224 373 aa4.28□□□□□ -1.72
SLX1YBR228W YHL026CP38740 315 aa4.28□□□□□ -1.72
SLX1YBR228W KRE9P39005 276 aa4.28□□□□□ -1.72
SLX1YBR228W RPT2P40327 437 aaKnown RBP4.28□□□□□ -1.72
SLX1YBR228W YFL040WP43562 540 aa4.28□□□□□ -1.72
SLX1YBR228W COG1P53079 417 aa4.28□□□□□ -1.72
SLX1YBR228W NNF2P53253 936 aa4.28□□□□□ -1.72
SLX1YBR228W ALF1P53904 254 aa4.28□□□□□ -1.72
SLX1YBR228W ALG11P53954 548 aaKnown RBP4.28□□□□□ -1.72
SLX1YBR228W CWC21Q03375 135 aaKnown RBP4.28□□□□□ -1.72
SLX1YBR228W ABP140Q08641 628 aaKnown RBP4.28□□□□□ -1.72
SLX1YBR228W SGT2Q12118 346 aaKnown RBP4.28□□□□□ -1.72
SLX1YBR228W TPK1P06244 397 aa4.27□□□□□ -1.73
SLX1YBR228W CDC33P07260 213 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms