RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP2	YOR124C	SIS2	P36024	562 aa		2.75	□□□□□ -1.97
UBP2	YOR124C	RPP0	P05317	312 aa	Known RBP	2.75	□□□□□ -1.97
UBP2	YOR124C	CFT1	Q06632	1357 aa	Known RBP	2.75	□□□□□ -1.97
UBP2	YOR124C	OXP1	P28273	1286 aa		2.75	□□□□□ -1.97
UBP2	YOR124C	RLF2	Q12495	606 aa		2.74	□□□□□ -1.97
UBP2	YOR124C	TY1B-NL2	Q99337	1749 aa	Known RBP	2.74	□□□□□ -1.97
UBP2	YOR124C	DUR1,2	P32528	1835 aa	Known RBP	2.73	□□□□□ -1.97
UBP2	YOR124C	YRF1-2	P40105	1681 aa		2.73	□□□□□ -1.97
UBP2	YOR124C	CLC1	P17891	233 aa		2.73	□□□□□ -1.97
UBP2	YOR124C	UBP10	P53874	792 aa	Predicted RBP	2.73	□□□□□ -1.97
UBP2	YOR124C	YIL055C	P40523	627 aa	Known RBP	2.72	□□□□□ -1.97
UBP2	YOR124C	LTE1	P07866	1435 aa		2.72	□□□□□ -1.97
UBP2	YOR124C	SNF7	P39929	240 aa	Known RBP	2.72	□□□□□ -1.97
UBP2	YOR124C	URB1	P34241	1764 aa	Known RBP	2.72	□□□□□ -1.97
UBP2	YOR124C	TFC8	Q12308	588 aa		2.72	□□□□□ -1.97
UBP2	YOR124C	SEC7	P11075	2009 aa	Known RBP	2.71	□□□□□ -1.98
UBP2	YOR124C	RAV1	P47104	1357 aa		2.71	□□□□□ -1.98
UBP2	YOR124C	CST9	Q06032	482 aa		2.71	□□□□□ -1.98
UBP2	YOR124C	UTP10	P42945	1769 aa	Known RBP	2.71	□□□□□ -1.98
UBP2	YOR124C	PDR11	P40550	1411 aa		2.71	□□□□□ -1.98
UBP2	YOR124C	RIM101	P33400	625 aa		2.7	□□□□□ -1.98
UBP2	YOR124C	SSP1	P38871	571 aa		2.7	□□□□□ -1.98
UBP2	YOR124C	YLR271W	Q06152	274 aa		2.69	□□□□□ -1.98
UBP2	YOR124C	YRB30	P53107	440 aa	Predicted RBP	2.69	□□□□□ -1.98
UBP2	YOR124C	MAP2	P38174	421 aa	Known RBP	2.69	□□□□□ -1.98
UBP2	YOR124C	CHZ1	P40019	153 aa	Predicted RBP	2.69	□□□□□ -1.98
UBP2	YOR124C	NOP53	Q12080	455 aa	Known RBP	2.68	□□□□□ -1.98
UBP2	YOR124C	NOT3	P06102	836 aa	Known RBP	2.68	□□□□□ -1.98
UBP2	YOR124C	RTC1	Q08281	1341 aa		2.68	□□□□□ -1.98
UBP2	YOR124C	LSP1	Q12230	341 aa	Known RBP	2.67	□□□□□ -1.98
UBP2	YOR124C	ROX1	P25042	368 aa		2.67	□□□□□ -1.98
UBP2	YOR124C	SIR4	P11978	1358 aa		2.66	□□□□□ -1.98
UBP2	YOR124C	RCR1	P38212	213 aa		2.65	□□□□□ -1.98
UBP2	YOR124C	BCK1	Q01389	1478 aa		2.65	□□□□□ -1.99
UBP2	YOR124C	PIL1	P53252	339 aa	Known RBP	2.65	□□□□□ -1.99
UBP2	YOR124C	CDC45	Q08032	650 aa		2.65	□□□□□ -1.99
UBP2	YOR124C	RTT106	P40161	455 aa		2.65	□□□□□ -1.99
UBP2	YOR124C	PSD2	P53037	1138 aa	Known RBP	2.65	□□□□□ -1.99
UBP2	YOR124C	QCR6	P00127	147 aa		2.64	□□□□□ -1.99
UBP2	YOR124C	AUS1	Q08409	1394 aa		2.64	□□□□□ -1.99
UBP2	YOR124C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
UBP2	YOR124C	PIB1	Q06651	286 aa		2.64	□□□□□ -1.99
UBP2	YOR124C	SLN1	P39928	1220 aa	Predicted RBP	2.63	□□□□□ -1.99
UBP2	YOR124C	VPS27	P40343	622 aa	Known RBP	2.63	□□□□□ -1.99
UBP2	YOR124C	YGR130C	P53278	816 aa		2.63	□□□□□ -1.99
UBP2	YOR124C	RPC31	P17890	251 aa		2.63	□□□□□ -1.99
UBP2	YOR124C	SAS10	Q12136	610 aa	Predicted RBP	2.63	□□□□□ -1.99
UBP2	YOR124C	NUP145	P49687	1317 aa		2.63	□□□□□ -1.99
UBP2	YOR124C	KRE33	P53914	1056 aa	Known RBP	2.63	□□□□□ -1.99
UBP2	YOR124C	YIL177C	P40434	1758 aa		2.63	□□□□□ -1.99
UBP2	YOR124C	YJL225C	P40889	1758 aa		2.63	□□□□□ -1.99
UBP2	YOR124C	HAP5	Q02516	242 aa		2.62	□□□□□ -1.99
UBP2	YOR124C	ROM2	P51862	1356 aa	Known RBP	2.62	□□□□□ -1.99
UBP2	YOR124C	BUD31	P25337	157 aa	Predicted RBP	2.62	□□□□□ -1.99
UBP2	YOR124C	PAF1	P38351	445 aa		2.62	□□□□□ -1.99
UBP2	YOR124C	PCT1	P13259	424 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	KNS1	P32350	737 aa	Predicted RBP	2.61	□□□□□ -1.99
UBP2	YOR124C	BCH2	P36122	765 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	SCY1	P53009	804 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	TY4B-H	P0C2J7	1802 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	TY4B-J	P47024	1803 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	MSP1	P28737	362 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	RPN1	P38764	993 aa	Known RBP	2.61	□□□□□ -1.99
UBP2	YOR124C	AIM44	Q99299	758 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	DRS2	P39524	1355 aa		2.61	□□□□□ -1.99
UBP2	YOR124C	MPE1	P35728	441 aa	Known RBP	2.6	□□□□□ -1.99
UBP2	YOR124C	RVB2	Q12464	471 aa	Known RBP	2.6	□□□□□ -1.99
UBP2	YOR124C	MRM1	P25270	412 aa		2.6	□□□□□ -1.99
UBP2	YOR124C	TGL3	P40308	642 aa		2.6	□□□□□ -1.99
UBP2	YOR124C	NST1	P53935	1240 aa		2.6	□□□□□ -1.99
UBP2	YOR124C	BYE1	P36106	594 aa		2.6	□□□□□ -1.99
UBP2	YOR124C	RSM7	P47150	247 aa		2.6	□□□□□ -1.99
UBP2	YOR124C	KRE5	P22023	1365 aa		2.59	□□□□□ -1.99
UBP2	YOR124C	SLX5	P32828	619 aa	Known RBP	2.59	□□□□□ -2
UBP2	YOR124C	HYR1	P40581	163 aa	Known RBP	2.59	□□□□□ -2
UBP2	YOR124C	EAF7	P53911	425 aa	Known RBP	2.58	□□□□□ -2
UBP2	YOR124C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
UBP2	YOR124C	AI2	P03876	854 aa		2.58	□□□□□ -2
UBP2	YOR124C	RRT14	P40470	206 aa		2.58	□□□□□ -2
UBP2	YOR124C	RAD9	P14737	1309 aa		2.58	□□□□□ -2
UBP2	YOR124C	TIF4632	P39936	914 aa	Known RBP	2.58	□□□□□ -2
UBP2	YOR124C	YFR006W	P43590	535 aa		2.58	□□□□□ -2
UBP2	YOR124C	CTR9	P89105	1077 aa		2.58	□□□□□ -2
UBP2	YOR124C	PDS5	Q04264	1277 aa		2.58	□□□□□ -2
UBP2	YOR124C	YEF3	P16521	1044 aa	Known RBP	2.57	□□□□□ -2
UBP2	YOR124C	SUI2	P20459	304 aa	Known RBP	2.57	□□□□□ -2
UBP2	YOR124C	SCT1	P32784	759 aa		2.57	□□□□□ -2
UBP2	YOR124C	RIX1	P38883	763 aa	Predicted RBP	2.57	□□□□□ -2
UBP2	YOR124C	BNR1	P40450	1375 aa		2.57	□□□□□ -2
UBP2	YOR124C	VPS24	P36095	224 aa	Known RBP	2.57	□□□□□ -2
UBP2	YOR124C	NUG1	P40010	520 aa	Known RBP	2.57	□□□□□ -2
UBP2	YOR124C	TEA1	P47988	759 aa		2.57	□□□□□ -2
UBP2	YOR124C	NOP14	Q99207	810 aa	Known RBP	2.57	□□□□□ -2
UBP2	YOR124C	YOL087C	Q99247	1116 aa		2.57	□□□□□ -2
UBP2	YOR124C	CIN4	P39110	191 aa		2.56	□□□□□ -2
UBP2	YOR124C	FKH1	P40466	484 aa		2.56	□□□□□ -2
UBP2	YOR124C	PSK1	P31374	1356 aa		2.56	□□□□□ -2
UBP2	YOR124C	SRP54	P20424	541 aa	Known RBP	2.56	□□□□□ -2
UBP2	YOR124C	FPR3	P38911	411 aa	Known RBP	2.56	□□□□□ -2
UBP2	YOR124C	BDH2	P39713	417 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms