RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeastyeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB3YNL293W ITC1P53125 1264 aa8.34□□□□□ -1.07
MSB3YNL293W SWH1P35845 1188 aa8.33□□□□□ -1.08
MSB3YNL293W THO2P53552 1597 aaKnown RBP8.33□□□□□ -1.08
MSB3YNL293W COG8Q04632 607 aa8.33□□□□□ -1.08
MSB3YNL293W KAR3P17119 729 aa8.33□□□□□ -1.08
MSB3YNL293W ZUO1P32527 433 aaKnown RBP8.33□□□□□ -1.08
MSB3YNL293W HOS4P40480 1083 aa8.33□□□□□ -1.08
MSB3YNL293W PXR1P53335 271 aaPredicted RBP8.33□□□□□ -1.08
MSB3YNL293W YOR389WQ08912 624 aa8.33□□□□□ -1.08
MSB3YNL293W TY4B-PA0A0B7P3V8 1104 aa8.32□□□□□ -1.08
MSB3YNL293W PUP2P32379 260 aa8.32□□□□□ -1.08
MSB3YNL293W NAB3P38996 802 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
MSB3YNL293W ORM2Q06144 216 aa8.32□□□□□ -1.08
MSB3YNL293W NDL1Q06568 189 aa8.32□□□□□ -1.08
MSB3YNL293W YOL087CQ99247 1116 aa8.32□□□□□ -1.08
MSB3YNL293W SPT6P23615 1451 aaKnown RBP8.32□□□□□ -1.08
MSB3YNL293W RAD3P06839 778 aa8.31□□□□□ -1.08
MSB3YNL293W GGA1Q06336 557 aa8.31□□□□□ -1.08
MSB3YNL293W SPT5P27692 1063 aaKnown RBP8.31□□□□□ -1.08
MSB3YNL293W BRN1P38170 754 aa8.31□□□□□ -1.08
MSB3YNL293W MGA2P40578 1113 aa8.31□□□□□ -1.08
MSB3YNL293W KIP3P53086 805 aaKnown RBP8.31□□□□□ -1.08
MSB3YNL293W PUS1Q12211 544 aaKnown RBP8.31□□□□□ -1.08
MSB3YNL293W DMA1P38823 416 aa8.3□□□□□ -1.08
MSB3YNL293W YMR1P47147 688 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
MSB3YNL293W YNL050CP53952 270 aa8.3□□□□□ -1.08
MSB3YNL293W UTP13Q05946 817 aaKnown RBP8.3□□□□□ -1.08
MSB3YNL293W ESC2Q06340 456 aa8.3□□□□□ -1.08
MSB3YNL293W CFT2Q12102 859 aaPredicted RBP8.3□□□□□ -1.08
MSB3YNL293W SEC39Q12745 709 aa8.3□□□□□ -1.08
MSB3YNL293W TAF2P23255 1407 aa8.3□□□□□ -1.08
MSB3YNL293W PSO2P30620 661 aa8.29□□□□□ -1.08
MSB3YNL293W HOS3Q02959 697 aaKnown RBP8.29□□□□□ -1.08
MSB3YNL293W SPB4P25808 606 aaPredicted RBP8.29□□□□□ -1.08
MSB3YNL293W PSE1P32337 1089 aaKnown RBP8.29□□□□□ -1.08
MSB3YNL293W ISW1P38144 1129 aa8.29□□□□□ -1.08
MSB3YNL293W YMR196WQ04336 1088 aa8.29□□□□□ -1.08
MSB3YNL293W RAD9P14737 1309 aa8.29□□□□□ -1.08
MSB3YNL293W TRM3Q07527 1436 aa8.28□□□□□ -1.08
MSB3YNL293W PHO87P25360 923 aa8.28□□□□□ -1.08
MSB3YNL293W IRC20Q06554 1556 aa8.28□□□□□ -1.08
MSB3YNL293W BRL1P38770 471 aa8.27□□□□□ -1.09
MSB3YNL293W LSP1Q12230 341 aaKnown RBP8.27□□□□□ -1.09
MSB3YNL293W CLN1P20437 546 aa8.27□□□□□ -1.09
MSB3YNL293W YKR023WP36119 530 aaKnown RBP8.27□□□□□ -1.09
MSB3YNL293W VPS27P40343 622 aaKnown RBP8.27□□□□□ -1.09
MSB3YNL293W RCF1Q03713 159 aa8.27□□□□□ -1.09
MSB3YNL293W IMH1Q06704 911 aaKnown RBP8.27□□□□□ -1.09
MSB3YNL293W PIM1P36775 1133 aa8.26□□□□□ -1.09
MSB3YNL293W DSF2P38213 736 aa8.26□□□□□ -1.09
MSB3YNL293W TEA1P47988 759 aa8.26□□□□□ -1.09
MSB3YNL293W NUP170P38181 1502 aa8.26□□□□□ -1.09
MSB3YNL293W YGL140CP53120 1219 aa8.25□□□□□ -1.09
MSB3YNL293W ARR1Q06596 294 aa8.25□□□□□ -1.09
MSB3YNL293W SLP1Q12232 587 aa8.25□□□□□ -1.09
MSB3YNL293W VPS5Q92331 675 aa8.25□□□□□ -1.09
MSB3YNL293W NDC80P40460 691 aa8.25□□□□□ -1.09
MSB3YNL293W IAH1P41734 238 aa8.25□□□□□ -1.09
MSB3YNL293W TFG1P41895 735 aaPredicted RBP8.25□□□□□ -1.09
MSB3YNL293W MTR4P47047 1073 aaKnown RBP8.25□□□□□ -1.09
MSB3YNL293W YMR102CQ03177 834 aa8.25□□□□□ -1.09
MSB3YNL293W GLE1Q12315 538 aa8.25□□□□□ -1.09
MSB3YNL293W MRS2Q01926 470 aa8.24□□□□□ -1.09
MSB3YNL293W LCD1Q04377 747 aa8.24□□□□□ -1.09
MSB3YNL293W TAF13P11747 167 aa8.23□□□□□ -1.09
MSB3YNL293W TPS3P38426 1054 aaKnown RBP8.23□□□□□ -1.09
MSB3YNL293W PEX19Q07418 342 aa8.23□□□□□ -1.09
MSB3YNL293W DAL5P15365 543 aa8.22□□□□□ -1.09
MSB3YNL293W KEX2P13134 814 aa8.21□□□□□ -1.09
MSB3YNL293W SIT1P39980 628 aa8.21□□□□□ -1.09
MSB3YNL293W SML1Q04964 104 aa8.21□□□□□ -1.09
MSB3YNL293W NPR3P38742 1146 aa8.21□□□□□ -1.1
MSB3YNL293W RTT107P38850 1070 aa8.21□□□□□ -1.1
MSB3YNL293W JJJ1P53863 590 aa8.21□□□□□ -1.1
MSB3YNL293W GCD6P32501 712 aaKnown RBP8.19□□□□□ -1.1
MSB3YNL293W OLA1P38219 394 aaKnown RBP8.19□□□□□ -1.1
MSB3YNL293W LAM1P38851 1228 aa8.19□□□□□ -1.1
MSB3YNL293W RIO2P40160 425 aaKnown RBP8.19□□□□□ -1.1
MSB3YNL293W NOP7P53261 605 aaKnown RBP8.19□□□□□ -1.1
MSB3YNL293W TPO2P53283 614 aa8.19□□□□□ -1.1
MSB3YNL293W SFI1Q12369 946 aa8.19□□□□□ -1.1
MSB3YNL293W TY1B-DR4Q07793 1604 aa8.19□□□□□ -1.1
MSB3YNL293W BRF1P29056 596 aa8.19□□□□□ -1.1
MSB3YNL293W DPH5P32469 300 aaPredicted RBP8.19□□□□□ -1.1
MSB3YNL293W APL6P46682 809 aa8.19□□□□□ -1.1
MSB3YNL293W DNM1P54861 757 aa8.19□□□□□ -1.1
MSB3YNL293W PSR1Q07800 427 aa8.19□□□□□ -1.1
MSB3YNL293W MYO2P19524 1574 aaKnown RBP8.18□□□□□ -1.1
MSB3YNL293W MHP1P43638 1398 aa8.18□□□□□ -1.1
MSB3YNL293W RPL5P26321 297 aaKnown RBP8.18□□□□□ -1.1
MSB3YNL293W SEC20P28791 383 aa8.18□□□□□ -1.1
MSB3YNL293W MCM2P29469 868 aa8.18□□□□□ -1.1
MSB3YNL293W NUF2P33895 451 aa8.18□□□□□ -1.1
MSB3YNL293W RRB1Q04225 511 aaKnown RBP8.18□□□□□ -1.1
MSB3YNL293W RAD16P31244 790 aa8.17□□□□□ -1.1
MSB3YNL293W RPG1P38249 964 aaKnown RBP8.17□□□□□ -1.1
MSB3YNL293W YDR341CQ05506 607 aaKnown RBP8.17□□□□□ -1.1
MSB3YNL293W RAD50P12753 1312 aa8.16□□□□□ -1.1
MSB3YNL293W SIN3P22579 1536 aa8.16□□□□□ -1.1
MSB3YNL293W SWI6P09959 803 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms