RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE1YMR264W USO1P25386 1790 aa15.49■□□□□ 0.07
CUE1YMR264W TY1B-NL2Q99337 1749 aaKnown RBP15.48■□□□□ 0.07
CUE1YMR264W NOP2P40991 618 aaKnown RBP15.47■□□□□ 0.07
CUE1YMR264W RCM1P53972 490 aa15.46■□□□□ 0.07
CUE1YMR264W YML133CQ03099 1374 aa15.46■□□□□ 0.07
CUE1YMR264W YLL067CQ07888 1374 aa15.46■□□□□ 0.07
CUE1YMR264W YLL066CQ99208 1374 aa15.46■□□□□ 0.07
CUE1YMR264W PSK1P31374 1356 aa15.45■□□□□ 0.06
CUE1YMR264W YNR029CP53729 429 aaKnown RBP15.41■□□□□ 0.06
CUE1YMR264W PPH3P32345 308 aa15.4■□□□□ 0.06
CUE1YMR264W YEF3P16521 1044 aaKnown RBP15.35■□□□□ 0.05
CUE1YMR264W TRK1P12685 1235 aa15.34■□□□□ 0.05
CUE1YMR264W CPS1P27614 576 aa15.34■□□□□ 0.05
CUE1YMR264W SNF2P22082 1703 aa15.32■□□□□ 0.04
CUE1YMR264W IOC4Q04213 475 aa15.3■□□□□ 0.04
CUE1YMR264W LEU2P04173 364 aaPredicted RBP15.28■□□□□ 0.04
CUE1YMR264W RPP0P05317 312 aaKnown RBP15.28■□□□□ 0.04
CUE1YMR264W PDI1P17967 522 aaKnown RBP15.25■□□□□ 0.03
CUE1YMR264W MTR4P47047 1073 aaKnown RBP15.25■□□□□ 0.03
CUE1YMR264W YMR196WQ04336 1088 aa15.25■□□□□ 0.03
CUE1YMR264W KAR2P16474 682 aaKnown RBP15.24■□□□□ 0.03
CUE1YMR264W VPS27P40343 622 aaKnown RBP15.24■□□□□ 0.03
CUE1YMR264W TAP42Q04372 366 aa15.24■□□□□ 0.03
CUE1YMR264W YDL144CQ07589 356 aa15.23■□□□□ 0.03
CUE1YMR264W CDC45Q08032 650 aa15.23■□□□□ 0.03
CUE1YMR264W RTF1P53064 558 aa15.21■□□□□ 0.03
CUE1YMR264W ADE6P38972 1358 aaKnown RBP15.19■□□□□ 0.02
CUE1YMR264W AUS1Q08409 1394 aa15.19■□□□□ 0.02
CUE1YMR264W TY4B-HP0C2J7 1802 aa15.18■□□□□ 0.02
CUE1YMR264W TY4B-JP47024 1803 aa15.18■□□□□ 0.02
CUE1YMR264W GRX4P32642 244 aa15.17■□□□□ 0.02
CUE1YMR264W CSE4P36012 229 aa15.17■□□□□ 0.02
CUE1YMR264W HIM1Q06674 414 aa15.17■□□□□ 0.02
CUE1YMR264W THI12P42883 340 aa15.16■□□□□ 0.02
CUE1YMR264W THI5P43534 340 aa15.16■□□□□ 0.02
CUE1YMR264W THI11P47183 340 aa15.16■□□□□ 0.02
CUE1YMR264W THI13Q07748 340 aa15.16■□□□□ 0.02
CUE1YMR264W RTR1P40084 226 aaPredicted RBP15.15■□□□□ 0.02
CUE1YMR264W MPP10P47083 593 aaKnown RBP15.15■□□□□ 0.02
CUE1YMR264W RRP46P53256 223 aaPredicted RBP15.15■□□□□ 0.02
CUE1YMR264W RPS24AP0CX31 135 aaKnown RBP15.14■□□□□ 0.01
CUE1YMR264W RPS24BP0CX32 135 aaKnown RBP15.14■□□□□ 0.01
CUE1YMR264W PRP43P53131 767 aaKnown RBP15.14■□□□□ 0.01
CUE1YMR264W RVB2Q12464 471 aaKnown RBP15.14■□□□□ 0.01
CUE1YMR264W PAP2P53632 584 aaKnown RBP15.13■□□□□ 0.01
CUE1YMR264W SUI2P20459 304 aaKnown RBP15.1■□□□□ 0.01
CUE1YMR264W FUN12P39730 1002 aaKnown RBP15.09■□□□□ 0.01
CUE1YMR264W GAS4Q08271 471 aa15.08■□□□□ 0
CUE1YMR264W DPS1P04802 557 aaKnown RBP15.06■□□□□ 0
CUE1YMR264W YRB30P53107 440 aaPredicted RBP15.06■□□□□ 0
CUE1YMR264W RPO41P13433 1351 aaKnown RBP15.05■□□□□ -0
CUE1YMR264W YIL177CP40434 1758 aa15.04■□□□□ -0
CUE1YMR264W YJL225CP40889 1758 aa15.04■□□□□ -0
CUE1YMR264W PRD1P25375 712 aa15.03■□□□□ -0
CUE1YMR264W YRF1-2P40105 1681 aa15.03■□□□□ -0
CUE1YMR264W MIF2P35201 549 aa15.02■□□□□ -0
CUE1YMR264W SAP155P43612 1002 aa15.02■□□□□ -0
CUE1YMR264W RRP5Q05022 1729 aaKnown RBP15.01□□□□□ -0.01
CUE1YMR264W THI22Q06490 572 aa15.01□□□□□ -0.01
CUE1YMR264W APC1P53886 1748 aa15□□□□□ -0.01
CUE1YMR264W TPD3P31383 635 aa14.99□□□□□ -0.01
CUE1YMR264W FKS3Q04952 1785 aa14.96□□□□□ -0.01
CUE1YMR264W BUB1P41695 1021 aaKnown RBP RIP-Chip data14.96□□□□□ -0.01not detected
CUE1YMR264W NAB6Q03735 1134 aaKnown RBP RIP-Chip data14.96□□□□□ -0.01not detected
CUE1YMR264W URB1P34241 1764 aaKnown RBP14.94□□□□□ -0.02
CUE1YMR264W HEF3P53978 1044 aaKnown RBP14.94□□□□□ -0.02
CUE1YMR264W AKL1P38080 1108 aaKnown RBP14.93□□□□□ -0.02
CUE1YMR264W FPR3P38911 411 aaKnown RBP14.92□□□□□ -0.02
CUE1YMR264W RTT109Q07794 436 aa14.92□□□□□ -0.02
CUE1YMR264W YRF1-4O13559 1382 aa14.9□□□□□ -0.02
CUE1YMR264W PRP5P21372 849 aaPredicted RBP14.9□□□□□ -0.02
CUE1YMR264W SIR4P11978 1358 aa14.89□□□□□ -0.03
CUE1YMR264W TFA1P36100 482 aa14.89□□□□□ -0.03
CUE1YMR264W PRP45P28004 379 aaPredicted RBP14.88□□□□□ -0.03
CUE1YMR264W RAD2P07276 1031 aa14.87□□□□□ -0.03
CUE1YMR264W PTP3P40048 928 aa14.86□□□□□ -0.03
CUE1YMR264W DSD1P53095 428 aa14.86□□□□□ -0.03
CUE1YMR264W SLM3Q12093 417 aa14.85□□□□□ -0.03
CUE1YMR264W DAL5P15365 543 aa14.83□□□□□ -0.04
CUE1YMR264W YIL092WP40497 633 aa14.83□□□□□ -0.04
CUE1YMR264W MSB3P48566 633 aaPredicted RBP14.83□□□□□ -0.04
CUE1YMR264W BUD27P43573 796 aaKnown RBP RIP-Chip data14.82□□□□□ -0.04not detected
CUE1YMR264W YNL050CP53952 270 aa14.81□□□□□ -0.04
CUE1YMR264W MAK21Q12176 1025 aaKnown RBP14.81□□□□□ -0.04
CUE1YMR264W NTH2P35172 780 aa14.8□□□□□ -0.04
CUE1YMR264W HSP104P31539 908 aaKnown RBP14.78□□□□□ -0.04
CUE1YMR264W GYP7P48365 746 aa14.77□□□□□ -0.05
CUE1YMR264W TCB1Q12466 1186 aa14.77□□□□□ -0.05
CUE1YMR264W RRT14P40470 206 aa14.76□□□□□ -0.05
CUE1YMR264W ZDS1P50111 915 aaKnown RBP14.76□□□□□ -0.05
CUE1YMR264W MAM1P40065 302 aa14.75□□□□□ -0.05
CUE1YMR264W XKS1P42826 600 aa14.75□□□□□ -0.05
CUE1YMR264W AOS1Q06624 347 aa14.75□□□□□ -0.05
CUE1YMR264W RPC31P17890 251 aa14.74□□□□□ -0.05
CUE1YMR264W CTF4Q01454 927 aa14.74□□□□□ -0.05
CUE1YMR264W POL32P47110 350 aa14.71□□□□□ -0.05
CUE1YMR264W EDE1P34216 1381 aa14.71□□□□□ -0.06
CUE1YMR264W RSF2P46974 1380 aa14.71□□□□□ -0.06
CUE1YMR264W RCR1P38212 213 aa14.7□□□□□ -0.06
CUE1YMR264W YBR287WP38355 427 aa14.69□□□□□ -0.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms